RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W ULI1P43604 169 aa7.06□□□□□ -1.28
NOP56YLR197W SOL3P38858 249 aa7.05□□□□□ -1.28
NOP56YLR197W TRP5P00931 707 aaKnown RBP7.04□□□□□ -1.28
NOP56YLR197W REF2P42073 533 aaPredicted RBP7.04□□□□□ -1.28
NOP56YLR197W SPB4P25808 606 aaPredicted RBP7.03□□□□□ -1.28
NOP56YLR197W YGR273CP53329 174 aa7.03□□□□□ -1.28
NOP56YLR197W IOC2Q12072 812 aa7.02□□□□□ -1.29
NOP56YLR197W NST1P53935 1240 aa7.01□□□□□ -1.29
NOP56YLR197W PBS2P08018 668 aa7.01□□□□□ -1.29
NOP56YLR197W UBP14P38237 781 aaKnown RBP6.99□□□□□ -1.29
NOP56YLR197W YEL023CP39992 682 aa6.99□□□□□ -1.29
NOP56YLR197W VHR2P40041 505 aa6.98□□□□□ -1.29
NOP56YLR197W PTC4P38089 393 aa6.97□□□□□ -1.29
NOP56YLR197W YLR326WQ06170 240 aaKnown RBP6.97□□□□□ -1.29
NOP56YLR197W DSF2P38213 736 aa6.96□□□□□ -1.29
NOP56YLR197W JIP4Q03361 876 aa6.96□□□□□ -1.29
NOP56YLR197W LEU3P08638 886 aa6.96□□□□□ -1.3
NOP56YLR197W LDB19Q12502 818 aa6.96□□□□□ -1.3
NOP56YLR197W COX6P00427 148 aa6.95□□□□□ -1.3
NOP56YLR197W AI4P03878 556 aa6.95□□□□□ -1.3
NOP56YLR197W KEX1P09620 729 aa6.95□□□□□ -1.3
NOP56YLR197W MPH3P0CE00 602 aa6.95□□□□□ -1.3
NOP56YLR197W YNL035CP53962 389 aaKnown RBP6.94□□□□□ -1.3
NOP56YLR197W YDR090CQ03193 310 aa6.94□□□□□ -1.3
NOP56YLR197W MAK21Q12176 1025 aaKnown RBP6.94□□□□□ -1.3
NOP56YLR197W DAN4P47179 1161 aa6.93□□□□□ -1.3
NOP56YLR197W RTG1P32607 177 aa6.91□□□□□ -1.3
NOP56YLR197W ILV3P39522 585 aaKnown RBP6.91□□□□□ -1.3
NOP56YLR197W PCS60P38137 543 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
NOP56YLR197W MAM3Q12296 706 aa6.91□□□□□ -1.3
NOP56YLR197W RAD54P32863 898 aa6.9□□□□□ -1.31
NOP56YLR197W SEC61P32915 480 aa6.88□□□□□ -1.31
NOP56YLR197W KIC1P38692 1080 aa6.88□□□□□ -1.31
NOP56YLR197W NCR1Q12200 1170 aa6.87□□□□□ -1.31
NOP56YLR197W SIS1P25294 352 aaKnown RBP6.86□□□□□ -1.31
NOP56YLR197W SLI15P38283 698 aa6.86□□□□□ -1.31
NOP56YLR197W IES2P40154 320 aa6.86□□□□□ -1.31
NOP56YLR197W FKH1P40466 484 aa6.85□□□□□ -1.31
NOP56YLR197W LEO1P38439 464 aa6.84□□□□□ -1.31
NOP56YLR197W NUP42P49686 430 aaKnown RBP6.84□□□□□ -1.31
NOP56YLR197W PML39Q03760 334 aa6.84□□□□□ -1.31
NOP56YLR197W TFG1P41895 735 aaPredicted RBP6.83□□□□□ -1.32
NOP56YLR197W DIT2P21595 489 aa6.82□□□□□ -1.32
NOP56YLR197W MID1P41821 548 aa6.81□□□□□ -1.32
NOP56YLR197W AIR2Q12476 344 aaKnown RBP6.81□□□□□ -1.32
NOP56YLR197W RPN1P38764 993 aaKnown RBP6.81□□□□□ -1.32
NOP56YLR197W YNR021WP53723 404 aaKnown RBP6.79□□□□□ -1.32
NOP56YLR197W YDL129WQ07555 291 aa6.79□□□□□ -1.32
NOP56YLR197W CDC73Q06697 393 aa6.77□□□□□ -1.33
NOP56YLR197W ORC6P38826 435 aa6.76□□□□□ -1.33
NOP56YLR197W RPP1BP10622 106 aaKnown RBP6.75□□□□□ -1.33
NOP56YLR197W SAP30P38429 201 aa6.75□□□□□ -1.33
NOP56YLR197W MPC54Q08550 464 aa6.75□□□□□ -1.33
NOP56YLR197W PSE1P32337 1089 aaKnown RBP6.74□□□□□ -1.33
NOP56YLR197W PEX29Q03370 554 aa6.74□□□□□ -1.33
NOP56YLR197W DPL1Q05567 589 aa6.74□□□□□ -1.33
NOP56YLR197W GAP1P19145 602 aaPredicted RBP6.73□□□□□ -1.33
NOP56YLR197W GLC3P32775 704 aa6.73□□□□□ -1.33
NOP56YLR197W YJL171CP46992 396 aa6.72□□□□□ -1.33
NOP56YLR197W RGR1P19263 1082 aa6.71□□□□□ -1.33
NOP56YLR197W MVP1P40959 511 aaKnown RBP6.71□□□□□ -1.33
NOP56YLR197W CSC1Q06538 782 aa6.71□□□□□ -1.33
NOP56YLR197W ATF2P53296 535 aa6.71□□□□□ -1.34
NOP56YLR197W NMA111P53920 997 aa6.71□□□□□ -1.34
NOP56YLR197W BMT6Q12291 365 aa6.71□□□□□ -1.34
NOP56YLR197W ISU2Q12056 156 aa6.69□□□□□ -1.34
NOP56YLR197W AIM7Q12156 149 aa6.69□□□□□ -1.34
NOP56YLR197W TFB4Q12004 338 aa6.68□□□□□ -1.34
NOP56YLR197W ARH1P48360 493 aa6.67□□□□□ -1.34
NOP56YLR197W PEX21P50091 288 aa6.67□□□□□ -1.34
NOP56YLR197W YDR344CQ05510 147 aa6.67□□□□□ -1.34
NOP56YLR197W KIN1P13185 1064 aa6.66□□□□□ -1.34
NOP56YLR197W YPR109WQ06104 294 aa6.66□□□□□ -1.34
NOP56YLR197W TEA1P47988 759 aa6.65□□□□□ -1.35
NOP56YLR197W HAP5Q02516 242 aa6.65□□□□□ -1.35
NOP56YLR197W TUM1Q08686 304 aaKnown RBP6.65□□□□□ -1.35
NOP56YLR197W ELP4Q02884 456 aaKnown RBP6.64□□□□□ -1.35
NOP56YLR197W YRR1Q12172 810 aa6.63□□□□□ -1.35
NOP56YLR197W CLB5P30283 435 aa6.62□□□□□ -1.35
NOP56YLR197W PRE3P38624 215 aa6.6□□□□□ -1.35
NOP56YLR197W CHL1P22516 861 aaPredicted RBP6.59□□□□□ -1.35
NOP56YLR197W SPT23P35210 1082 aa6.59□□□□□ -1.35
NOP56YLR197W BNI4P53858 892 aa6.59□□□□□ -1.35
NOP56YLR197W PDR1P12383 1068 aa6.58□□□□□ -1.36
NOP56YLR197W NIS1P53939 407 aa6.56□□□□□ -1.36
NOP56YLR197W PTC2P39966 464 aaKnown RBP6.55□□□□□ -1.36
NOP56YLR197W RAM1P22007 431 aa6.54□□□□□ -1.36
NOP56YLR197W GUA1P38625 525 aaKnown RBP6.54□□□□□ -1.36
NOP56YLR197W NUD1P32336 851 aa6.53□□□□□ -1.36
NOP56YLR197W FPK1P53739 893 aa6.53□□□□□ -1.36
NOP56YLR197W SIT4P20604 311 aa6.52□□□□□ -1.37
NOP56YLR197W CSN12P47130 423 aa6.52□□□□□ -1.37
NOP56YLR197W YML082WQ04533 649 aaKnown RBP6.52□□□□□ -1.37
NOP56YLR197W ISM1P48526 1002 aa6.5□□□□□ -1.37
NOP56YLR197W YMR196WQ04336 1088 aa6.5□□□□□ -1.37
NOP56YLR197W NPL4P33755 580 aa6.5□□□□□ -1.37
NOP56YLR197W STR2P47164 639 aa6.5□□□□□ -1.37
NOP56YLR197W TYW1Q08960 810 aaKnown RBP6.5□□□□□ -1.37
NOP56YLR197W YPR015CQ12531 247 aa6.5□□□□□ -1.37
NOP56YLR197W KTR1P27810 393 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms