RNA–Protein interactions for RNA: YLR121C

YPS3, Transcript of Aspartic protease, yeastyeast

Gene YPS3, Length 1,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPS3YLR121C RPA190P10964 1664 aaKnown RBP13.37□□□□□ -0.27
YPS3YLR121C MTC1P47018 478 aaKnown RBP13.37□□□□□ -0.27
YPS3YLR121C IKI3Q06706 1349 aaKnown RBP13.35□□□□□ -0.27
YPS3YLR121C DNF1P32660 1571 aa13.35□□□□□ -0.27
YPS3YLR121C GEA1P47102 1408 aaPredicted RBP13.35□□□□□ -0.27
YPS3YLR121C SNT2P53127 1403 aa13.33□□□□□ -0.28
YPS3YLR121C NTE1Q04958 1679 aa13.31□□□□□ -0.28
YPS3YLR121C RPO21P04050 1733 aaKnown RBP13.28□□□□□ -0.28
YPS3YLR121C NUP170P38181 1502 aa13.27□□□□□ -0.29
YPS3YLR121C TY3B-GQ99315 1547 aa13.25□□□□□ -0.29
YPS3YLR121C YBT1P32386 1661 aa13.19□□□□□ -0.3
YPS3YLR121C SSM4P40318 1319 aa13.19□□□□□ -0.3
YPS3YLR121C RTT106P40161 455 aa13.18□□□□□ -0.3
YPS3YLR121C GEA2P39993 1459 aaKnown RBP13.18□□□□□ -0.3
YPS3YLR121C IRC20Q06554 1556 aa13.18□□□□□ -0.3
YPS3YLR121C NUP159P40477 1460 aa13.15□□□□□ -0.3
YPS3YLR121C VPS15P22219 1454 aa13.12□□□□□ -0.31
YPS3YLR121C YRF1-1P0CX20 1796 aa13.11□□□□□ -0.31
YPS3YLR121C YRF1-5P0CX21 1796 aa13.11□□□□□ -0.31
YPS3YLR121C YRF1-8P0CX22 1796 aa13.11□□□□□ -0.31
YPS3YLR121C CAT8P39113 1433 aa13.07□□□□□ -0.32
YPS3YLR121C SPO14P36126 1683 aa13.04□□□□□ -0.32
YPS3YLR121C MET5P47169 1442 aa13.02□□□□□ -0.33
YPS3YLR121C PDR12Q02785 1511 aa13□□□□□ -0.33
YPS3YLR121C GDB1Q06625 1536 aa13□□□□□ -0.33
YPS3YLR121C PDR10P51533 1564 aa12.99□□□□□ -0.33
YPS3YLR121C MET10P39692 1035 aa12.99□□□□□ -0.33
YPS3YLR121C ARO1P08566 1588 aaKnown RBP12.98□□□□□ -0.33
YPS3YLR121C NUP157P40064 1391 aaKnown RBP12.94□□□□□ -0.34
YPS3YLR121C SRB8P25648 1427 aa12.92□□□□□ -0.34
YPS3YLR121C CKB1P43639 278 aa12.91□□□□□ -0.34
YPS3YLR121C BUD3P25558 1636 aa12.9□□□□□ -0.34
YPS3YLR121C YSP2Q06681 1438 aa12.8□□□□□ -0.36
YPS3YLR121C GCN2P15442 1659 aa12.8□□□□□ -0.36
YPS3YLR121C IQG1Q12280 1495 aa12.78□□□□□ -0.36
YPS3YLR121C SEC7P11075 2009 aaKnown RBP12.74□□□□□ -0.37
YPS3YLR121C BUD21Q08492 214 aaPredicted RBP12.74□□□□□ -0.37
YPS3YLR121C MMS1Q06211 1407 aa12.73□□□□□ -0.37
YPS3YLR121C LTE1P07866 1435 aa12.69□□□□□ -0.38
YPS3YLR121C BNR1P40450 1375 aa12.66□□□□□ -0.38
YPS3YLR121C DOP1Q03921 1698 aa12.63□□□□□ -0.39
YPS3YLR121C YOR093CQ12275 1648 aa12.61□□□□□ -0.39
YPS3YLR121C CHC1P22137 1653 aaKnown RBP12.61□□□□□ -0.39
YPS3YLR121C DRS2P39524 1355 aa12.57□□□□□ -0.4
YPS3YLR121C POL5P39985 1022 aaKnown RBP12.57□□□□□ -0.4
YPS3YLR121C NOP7P53261 605 aaKnown RBP12.56□□□□□ -0.4
YPS3YLR121C TRM3Q07527 1436 aa12.55□□□□□ -0.4
YPS3YLR121C PDR5P33302 1511 aaKnown RBP12.54□□□□□ -0.4
YPS3YLR121C BNI1P41832 1953 aa12.52□□□□□ -0.41
YPS3YLR121C PAF1P38351 445 aa12.5□□□□□ -0.41
YPS3YLR121C VMR1P38735 1592 aa12.49□□□□□ -0.41
YPS3YLR121C NUP188P52593 1655 aaKnown RBP12.47□□□□□ -0.41
YPS3YLR121C ITT1Q04638 464 aa12.47□□□□□ -0.41
YPS3YLR121C BFR2Q06631 534 aaKnown RBP12.46□□□□□ -0.42
YPS3YLR121C PDR11P40550 1411 aa12.43□□□□□ -0.42
YPS3YLR121C IML1P47170 1584 aa12.41□□□□□ -0.42
YPS3YLR121C RAV1P47104 1357 aa12.4□□□□□ -0.42
YPS3YLR121C DNF2Q12675 1612 aa12.38□□□□□ -0.43
YPS3YLR121C RTC1Q08281 1341 aa12.36□□□□□ -0.43
YPS3YLR121C NSR1P27476 414 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
YPS3YLR121C ORC1P54784 914 aaPredicted RBP12.33□□□□□ -0.44
YPS3YLR121C NUP192P47054 1683 aa12.3□□□□□ -0.44
YPS3YLR121C TY3B-IQ7LHG5 1498 aaKnown RBP12.29□□□□□ -0.44
YPS3YLR121C SPT7P35177 1332 aa12.29□□□□□ -0.44
YPS3YLR121C TAF5P38129 798 aa12.27□□□□□ -0.44
YPS3YLR121C SEC3P33332 1336 aaKnown RBP12.27□□□□□ -0.45
YPS3YLR121C TYS1P36421 394 aaKnown RBP12.27□□□□□ -0.45
YPS3YLR121C IPL1P38991 367 aa12.25□□□□□ -0.45
YPS3YLR121C MHP1P43638 1398 aa12.24□□□□□ -0.45
YPS3YLR121C URN1Q06525 465 aaKnown RBP12.24□□□□□ -0.45
YPS3YLR121C ENP1P38333 483 aaKnown RBP12.22□□□□□ -0.45
YPS3YLR121C ESL2P36168 1195 aa12.21□□□□□ -0.45
YPS3YLR121C KIP3P53086 805 aaKnown RBP12.18□□□□□ -0.46
YPS3YLR121C YLR419WQ06698 1435 aaKnown RBP12.18□□□□□ -0.46
YPS3YLR121C YAP3P38749 330 aa12.17□□□□□ -0.46
YPS3YLR121C PSD2P53037 1138 aaKnown RBP12.14□□□□□ -0.47
YPS3YLR121C LEU3P08638 886 aa12.13□□□□□ -0.47
YPS3YLR121C RAD9P14737 1309 aa12.1□□□□□ -0.47
YPS3YLR121C PDS5Q04264 1277 aa12.1□□□□□ -0.47
YPS3YLR121C DNF3Q12674 1656 aa12.09□□□□□ -0.47
YPS3YLR121C BCK1Q01389 1478 aa12.08□□□□□ -0.48
YPS3YLR121C ALD4P46367 519 aaKnown RBP12.08□□□□□ -0.48
YPS3YLR121C SPE2P21182 396 aa12.07□□□□□ -0.48
YPS3YLR121C MLP1Q02455 1875 aaKnown RBP12.07□□□□□ -0.48
YPS3YLR121C HAP1P0CE41 1502 aa12.06□□□□□ -0.48
YPS3YLR121C TAF8Q03750 510 aa12.06□□□□□ -0.48
YPS3YLR121C CAB1Q04430 367 aa12.04□□□□□ -0.48
YPS3YLR121C SCT1P32784 759 aa12.01□□□□□ -0.49
YPS3YLR121C NST1P53935 1240 aa12□□□□□ -0.49
YPS3YLR121C CHZ1P40019 153 aaPredicted RBP11.96□□□□□ -0.49
YPS3YLR121C NAP1P25293 417 aaKnown RBP11.96□□□□□ -0.5
YPS3YLR121C KRE5P22023 1365 aa11.95□□□□□ -0.5
YPS3YLR121C PRS1P32895 427 aaKnown RBP11.95□□□□□ -0.5
YPS3YLR121C RTG3P38165 486 aa11.94□□□□□ -0.5
YPS3YLR121C MRX12P47084 519 aa11.94□□□□□ -0.5
YPS3YLR121C ABP1P15891 592 aaKnown RBP11.92□□□□□ -0.5
YPS3YLR121C NOP2P40991 618 aaKnown RBP11.92□□□□□ -0.5
YPS3YLR121C MAK10Q02197 733 aa11.91□□□□□ -0.5
YPS3YLR121C FKH1P40466 484 aa11.9□□□□□ -0.5
YPS3YLR121C RIA1P53893 1110 aa11.9□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms