RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C TY1B-MR2Q04670 1755 aaKnown RBP10.59□□□□□ -0.71
AVL9YLR114C TY1B-LR1Q12088 1755 aaKnown RBP10.59□□□□□ -0.71
AVL9YLR114C TY1B-NL1Q12112 1755 aa10.59□□□□□ -0.71
AVL9YLR114C TY1B-GR1Q12141 1755 aa10.59□□□□□ -0.71
AVL9YLR114C TY1B-BLQ12490 1755 aa10.59□□□□□ -0.71
AVL9YLR114C VPS15P22219 1454 aa10.55□□□□□ -0.72
AVL9YLR114C ESC1Q03661 1658 aaKnown RBP10.55□□□□□ -0.72
AVL9YLR114C GEA2P39993 1459 aaKnown RBP10.52□□□□□ -0.73
AVL9YLR114C RTT106P40161 455 aa10.51□□□□□ -0.73
AVL9YLR114C YBT1P32386 1661 aa10.51□□□□□ -0.73
AVL9YLR114C CAT8P39113 1433 aa10.5□□□□□ -0.73
AVL9YLR114C IRC20Q06554 1556 aa10.5□□□□□ -0.73
AVL9YLR114C NSR1P27476 414 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
AVL9YLR114C DNF1P32660 1571 aa10.46□□□□□ -0.73
AVL9YLR114C RPA190P10964 1664 aaKnown RBP10.45□□□□□ -0.74
AVL9YLR114C NTE1Q04958 1679 aa10.44□□□□□ -0.74
AVL9YLR114C RPO21P04050 1733 aaKnown RBP10.43□□□□□ -0.74
AVL9YLR114C POL5P39985 1022 aaKnown RBP10.43□□□□□ -0.74
AVL9YLR114C SRB8P25648 1427 aa10.41□□□□□ -0.74
AVL9YLR114C GDB1Q06625 1536 aa10.39□□□□□ -0.75
AVL9YLR114C NUP159P40477 1460 aa10.36□□□□□ -0.75
AVL9YLR114C PDR10P51533 1564 aa10.35□□□□□ -0.75
AVL9YLR114C ARO1P08566 1588 aaKnown RBP10.35□□□□□ -0.75
AVL9YLR114C PDR12Q02785 1511 aa10.34□□□□□ -0.75
AVL9YLR114C MET10P39692 1035 aa10.33□□□□□ -0.76
AVL9YLR114C CKB1P43639 278 aa10.32□□□□□ -0.76
AVL9YLR114C GCN2P15442 1659 aa10.3□□□□□ -0.76
AVL9YLR114C ENP1P38333 483 aaKnown RBP10.29□□□□□ -0.76
AVL9YLR114C NUP157P40064 1391 aaKnown RBP10.27□□□□□ -0.76
AVL9YLR114C NOP2P40991 618 aaKnown RBP10.27□□□□□ -0.76
AVL9YLR114C SPO14P36126 1683 aa10.27□□□□□ -0.77
AVL9YLR114C SEC3P33332 1336 aaKnown RBP10.26□□□□□ -0.77
AVL9YLR114C BUD21Q08492 214 aaPredicted RBP10.26□□□□□ -0.77
AVL9YLR114C MTC1P47018 478 aaKnown RBP10.25□□□□□ -0.77
AVL9YLR114C YSP2Q06681 1438 aa10.25□□□□□ -0.77
AVL9YLR114C MMS1Q06211 1407 aa10.24□□□□□ -0.77
AVL9YLR114C YRF1-1P0CX20 1796 aa10.24□□□□□ -0.77
AVL9YLR114C YRF1-5P0CX21 1796 aa10.24□□□□□ -0.77
AVL9YLR114C YRF1-8P0CX22 1796 aa10.24□□□□□ -0.77
AVL9YLR114C BUD3P25558 1636 aa10.21□□□□□ -0.77
AVL9YLR114C SPT7P35177 1332 aa10.21□□□□□ -0.78
AVL9YLR114C NOP7P53261 605 aaKnown RBP10.21□□□□□ -0.78
AVL9YLR114C IQG1Q12280 1495 aa10.2□□□□□ -0.78
AVL9YLR114C MET5P47169 1442 aa10.2□□□□□ -0.78
AVL9YLR114C PDR5P33302 1511 aaKnown RBP10.19□□□□□ -0.78
AVL9YLR114C PAF1P38351 445 aa10.12□□□□□ -0.79
AVL9YLR114C BFR2Q06631 534 aaKnown RBP10.11□□□□□ -0.79
AVL9YLR114C SEC7P11075 2009 aaKnown RBP10.1□□□□□ -0.79
AVL9YLR114C BNR1P40450 1375 aa10.09□□□□□ -0.79
AVL9YLR114C YOR093CQ12275 1648 aa10.08□□□□□ -0.8
AVL9YLR114C MHP1P43638 1398 aa10.08□□□□□ -0.8
AVL9YLR114C LTE1P07866 1435 aa10.07□□□□□ -0.8
AVL9YLR114C TY3B-IQ7LHG5 1498 aaKnown RBP10.03□□□□□ -0.8
AVL9YLR114C PRS1P32895 427 aaKnown RBP10.03□□□□□ -0.8
AVL9YLR114C RAV1P47104 1357 aa10.02□□□□□ -0.8
AVL9YLR114C CHC1P22137 1653 aaKnown RBP10.02□□□□□ -0.81
AVL9YLR114C PSD2P53037 1138 aaKnown RBP10.02□□□□□ -0.81
AVL9YLR114C ORC1P54784 914 aaPredicted RBP10.02□□□□□ -0.81
AVL9YLR114C RTC1Q08281 1341 aa10.01□□□□□ -0.81
AVL9YLR114C PDR11P40550 1411 aa9.99□□□□□ -0.81
AVL9YLR114C YLR419WQ06698 1435 aaKnown RBP9.98□□□□□ -0.81
AVL9YLR114C LEU3P08638 886 aa9.97□□□□□ -0.81
AVL9YLR114C VMR1P38735 1592 aa9.94□□□□□ -0.82
AVL9YLR114C DRS2P39524 1355 aa9.94□□□□□ -0.82
AVL9YLR114C TAF5P38129 798 aa9.93□□□□□ -0.82
AVL9YLR114C PDS5Q04264 1277 aa9.93□□□□□ -0.82
AVL9YLR114C ESL2P36168 1195 aa9.92□□□□□ -0.82
AVL9YLR114C TRM3Q07527 1436 aa9.9□□□□□ -0.82
AVL9YLR114C KIP3P53086 805 aaKnown RBP9.9□□□□□ -0.83
AVL9YLR114C NUP188P52593 1655 aaKnown RBP9.89□□□□□ -0.83
AVL9YLR114C IML1P47170 1584 aa9.89□□□□□ -0.83
AVL9YLR114C DOP1Q03921 1698 aa9.88□□□□□ -0.83
AVL9YLR114C NUP192P47054 1683 aa9.85□□□□□ -0.83
AVL9YLR114C SCT1P32784 759 aa9.84□□□□□ -0.83
AVL9YLR114C NST1P53935 1240 aa9.82□□□□□ -0.84
AVL9YLR114C DNF2Q12675 1612 aa9.81□□□□□ -0.84
AVL9YLR114C SPE2P21182 396 aa9.8□□□□□ -0.84
AVL9YLR114C IPL1P38991 367 aa9.78□□□□□ -0.84
AVL9YLR114C TYS1P36421 394 aaKnown RBP9.77□□□□□ -0.84
AVL9YLR114C YAP3P38749 330 aa9.76□□□□□ -0.85
AVL9YLR114C TFA1P36100 482 aa9.74□□□□□ -0.85
AVL9YLR114C URN1Q06525 465 aaKnown RBP9.74□□□□□ -0.85
AVL9YLR114C ALD4P46367 519 aaKnown RBP9.73□□□□□ -0.85
AVL9YLR114C RPP0P05317 312 aaKnown RBP9.72□□□□□ -0.85
AVL9YLR114C RTG3P38165 486 aa9.72□□□□□ -0.85
AVL9YLR114C TAF8Q03750 510 aa9.72□□□□□ -0.85
AVL9YLR114C IOC4Q04213 475 aa9.71□□□□□ -0.86
AVL9YLR114C BCK1Q01389 1478 aa9.7□□□□□ -0.86
AVL9YLR114C RAD9P14737 1309 aa9.7□□□□□ -0.86
AVL9YLR114C CHZ1P40019 153 aaPredicted RBP9.7□□□□□ -0.86
AVL9YLR114C FKH1P40466 484 aa9.7□□□□□ -0.86
AVL9YLR114C ITT1Q04638 464 aa9.7□□□□□ -0.86
AVL9YLR114C CFT1Q06632 1357 aaKnown RBP9.7□□□□□ -0.86
AVL9YLR114C VPS27P40343 622 aaKnown RBP9.69□□□□□ -0.86
AVL9YLR114C CDC45Q08032 650 aa9.68□□□□□ -0.86
AVL9YLR114C MLP1Q02455 1875 aaKnown RBP9.68□□□□□ -0.86
AVL9YLR114C BNI1P41832 1953 aa9.66□□□□□ -0.86
AVL9YLR114C YEF3P16521 1044 aaKnown RBP9.64□□□□□ -0.87
AVL9YLR114C CAB1Q04430 367 aa9.64□□□□□ -0.87
AVL9YLR114C RVB2Q12464 471 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms