RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeastyeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
REX3YLR107W ULI1P43604 169 aa10.49□□□□□ -0.73
REX3YLR107W TRP5P00931 707 aaKnown RBP10.48□□□□□ -0.73
REX3YLR107W SOL3P38858 249 aa10.48□□□□□ -0.73
REX3YLR107W REF2P42073 533 aaPredicted RBP10.47□□□□□ -0.73
REX3YLR107W YGR273CP53329 174 aa10.47□□□□□ -0.73
REX3YLR107W NST1P53935 1240 aa10.47□□□□□ -0.73
REX3YLR107W IOC2Q12072 812 aa10.45□□□□□ -0.74
REX3YLR107W YEL023CP39992 682 aa10.42□□□□□ -0.74
REX3YLR107W UBP14P38237 781 aaKnown RBP10.4□□□□□ -0.74
REX3YLR107W PBS2P08018 668 aa10.39□□□□□ -0.75
REX3YLR107W VHR2P40041 505 aa10.39□□□□□ -0.75
REX3YLR107W LEU3P08638 886 aa10.38□□□□□ -0.75
REX3YLR107W SPB4P25808 606 aaPredicted RBP10.38□□□□□ -0.75
REX3YLR107W JIP4Q03361 876 aa10.38□□□□□ -0.75
REX3YLR107W YLR326WQ06170 240 aaKnown RBP10.38□□□□□ -0.75
REX3YLR107W AI4P03878 556 aa10.37□□□□□ -0.75
REX3YLR107W PTC4P38089 393 aa10.37□□□□□ -0.75
REX3YLR107W DSF2P38213 736 aa10.37□□□□□ -0.75
REX3YLR107W LDB19Q12502 818 aa10.37□□□□□ -0.75
REX3YLR107W MPH3P0CE00 602 aa10.36□□□□□ -0.75
REX3YLR107W MAK21Q12176 1025 aaKnown RBP10.36□□□□□ -0.75
REX3YLR107W KEX1P09620 729 aa10.35□□□□□ -0.75
REX3YLR107W YNL035CP53962 389 aaKnown RBP10.35□□□□□ -0.75
REX3YLR107W ILV3P39522 585 aaKnown RBP10.34□□□□□ -0.75
REX3YLR107W DAN4P47179 1161 aa10.34□□□□□ -0.75
REX3YLR107W YDR090CQ03193 310 aa10.34□□□□□ -0.75
REX3YLR107W COX6P00427 148 aa10.31□□□□□ -0.76
REX3YLR107W RTG1P32607 177 aa10.3□□□□□ -0.76
REX3YLR107W SEC61P32915 480 aa10.28□□□□□ -0.76
REX3YLR107W RAD54P32863 898 aa10.27□□□□□ -0.77
REX3YLR107W PCS60P38137 543 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77 RIP-Chip
REX3YLR107W FKH1P40466 484 aa10.27□□□□□ -0.77
REX3YLR107W MAM3Q12296 706 aa10.27□□□□□ -0.77
REX3YLR107W KIC1P38692 1080 aa10.23□□□□□ -0.77
REX3YLR107W SIS1P25294 352 aaKnown RBP10.21□□□□□ -0.77
REX3YLR107W IES2P40154 320 aa10.21□□□□□ -0.77
REX3YLR107W SLI15P38283 698 aa10.2□□□□□ -0.78
REX3YLR107W NCR1Q12200 1170 aa10.19□□□□□ -0.78
REX3YLR107W AIR2Q12476 344 aaKnown RBP10.18□□□□□ -0.78
REX3YLR107W NUP42P49686 430 aaKnown RBP10.17□□□□□ -0.78
REX3YLR107W PML39Q03760 334 aa10.17□□□□□ -0.78
REX3YLR107W TFG1P41895 735 aaPredicted RBP10.15□□□□□ -0.78
REX3YLR107W YDL129WQ07555 291 aa10.13□□□□□ -0.79
REX3YLR107W ORC6P38826 435 aa10.12□□□□□ -0.79
REX3YLR107W MID1P41821 548 aa10.12□□□□□ -0.79
REX3YLR107W YNR021WP53723 404 aaKnown RBP10.11□□□□□ -0.79
REX3YLR107W DIT2P21595 489 aa10.1□□□□□ -0.79
REX3YLR107W LEO1P38439 464 aa10.1□□□□□ -0.79
REX3YLR107W RPN1P38764 993 aaKnown RBP10.09□□□□□ -0.79
REX3YLR107W CDC73Q06697 393 aa10.06□□□□□ -0.8
REX3YLR107W MPC54Q08550 464 aa10.06□□□□□ -0.8
REX3YLR107W RPP1BP10622 106 aaKnown RBP10.05□□□□□ -0.8
REX3YLR107W GAP1P19145 602 aaPredicted RBP10.05□□□□□ -0.8
REX3YLR107W PSE1P32337 1089 aaKnown RBP10.05□□□□□ -0.8
REX3YLR107W SAP30P38429 201 aa10.04□□□□□ -0.8
REX3YLR107W DPL1Q05567 589 aa10.04□□□□□ -0.8
REX3YLR107W PEX29Q03370 554 aa10.03□□□□□ -0.8
REX3YLR107W GLC3P32775 704 aa10.01□□□□□ -0.81
REX3YLR107W CSC1Q06538 782 aa10.01□□□□□ -0.81
REX3YLR107W BMT6Q12291 365 aa10□□□□□ -0.81
REX3YLR107W YJL171CP46992 396 aa9.99□□□□□ -0.81
REX3YLR107W AIM7Q12156 149 aa9.99□□□□□ -0.81
REX3YLR107W RGR1P19263 1082 aa9.97□□□□□ -0.81
REX3YLR107W MVP1P40959 511 aaKnown RBP9.97□□□□□ -0.81
REX3YLR107W TFB4Q12004 338 aa9.97□□□□□ -0.81
REX3YLR107W ARH1P48360 493 aa9.95□□□□□ -0.82
REX3YLR107W NMA111P53920 997 aa9.95□□□□□ -0.82
REX3YLR107W YDR344CQ05510 147 aa9.95□□□□□ -0.82
REX3YLR107W ISU2Q12056 156 aa9.94□□□□□ -0.82
REX3YLR107W ATF2P53296 535 aa9.93□□□□□ -0.82
REX3YLR107W HAP5Q02516 242 aa9.92□□□□□ -0.82
REX3YLR107W PEX21P50091 288 aa9.91□□□□□ -0.82
REX3YLR107W KIN1P13185 1064 aa9.89□□□□□ -0.83
REX3YLR107W CLB5P30283 435 aa9.89□□□□□ -0.83
REX3YLR107W ELP4Q02884 456 aaKnown RBP9.87□□□□□ -0.83
REX3YLR107W YPR109WQ06104 294 aa9.87□□□□□ -0.83
REX3YLR107W TUM1Q08686 304 aaKnown RBP9.87□□□□□ -0.83
REX3YLR107W PRE3P38624 215 aa9.86□□□□□ -0.83
REX3YLR107W TEA1P47988 759 aa9.86□□□□□ -0.83
REX3YLR107W BNI4P53858 892 aa9.85□□□□□ -0.83
REX3YLR107W YRR1Q12172 810 aa9.85□□□□□ -0.83
REX3YLR107W CHL1P22516 861 aaPredicted RBP9.82□□□□□ -0.84
REX3YLR107W SPT23P35210 1082 aa9.82□□□□□ -0.84
REX3YLR107W PDR1P12383 1068 aa9.78□□□□□ -0.84
REX3YLR107W RAM1P22007 431 aa9.76□□□□□ -0.85
REX3YLR107W NIS1P53939 407 aa9.76□□□□□ -0.85
REX3YLR107W NUD1P32336 851 aa9.74□□□□□ -0.85
REX3YLR107W PTC2P39966 464 aaKnown RBP9.74□□□□□ -0.85
REX3YLR107W SIT4P20604 311 aa9.72□□□□□ -0.85
REX3YLR107W YML082WQ04533 649 aaKnown RBP9.72□□□□□ -0.85
REX3YLR107W STR2P47164 639 aa9.7□□□□□ -0.86
REX3YLR107W FPK1P53739 893 aa9.7□□□□□ -0.86
REX3YLR107W YPR015CQ12531 247 aa9.7□□□□□ -0.86
REX3YLR107W GUA1P38625 525 aaKnown RBP9.68□□□□□ -0.86
REX3YLR107W ISM1P48526 1002 aa9.68□□□□□ -0.86
REX3YLR107W HST2P53686 357 aa9.68□□□□□ -0.86
REX3YLR107W YMR196WQ04336 1088 aa9.68□□□□□ -0.86
REX3YLR107W CSN12P47130 423 aa9.67□□□□□ -0.86
REX3YLR107W NPL4P33755 580 aa9.66□□□□□ -0.86
REX3YLR107W RTF1P53064 558 aa9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms