RNA–Protein interactions for RNA: YLR034C

SMF3, Transcript of Putative divalent metal ion transporter involved in iron homeostasis, yeastyeast

Gene SMF3, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF3YLR034C DCW1P36091 449 aa9.83□□□□□ -0.84
SMF3YLR034C SOL3P38858 249 aa9.82□□□□□ -0.84
SMF3YLR034C TRP5P00931 707 aaKnown RBP9.82□□□□□ -0.84
SMF3YLR034C ULI1P43604 169 aa9.82□□□□□ -0.84
SMF3YLR034C IOC2Q12072 812 aa9.82□□□□□ -0.84
SMF3YLR034C YGR273CP53329 174 aa9.8□□□□□ -0.84
SMF3YLR034C REF2P42073 533 aaPredicted RBP9.77□□□□□ -0.85
SMF3YLR034C YEL023CP39992 682 aa9.73□□□□□ -0.85
SMF3YLR034C JIP4Q03361 876 aa9.73□□□□□ -0.85
SMF3YLR034C AI4P03878 556 aa9.72□□□□□ -0.85
SMF3YLR034C UBP14P38237 781 aaKnown RBP9.72□□□□□ -0.85
SMF3YLR034C MPH3P0CE00 602 aa9.71□□□□□ -0.86
SMF3YLR034C YLR326WQ06170 240 aaKnown RBP9.71□□□□□ -0.86
SMF3YLR034C LDB19Q12502 818 aa9.71□□□□□ -0.86
SMF3YLR034C PTC4P38089 393 aa9.7□□□□□ -0.86
SMF3YLR034C DAN4P47179 1161 aa9.7□□□□□ -0.86
SMF3YLR034C YNL035CP53962 389 aaKnown RBP9.7□□□□□ -0.86
SMF3YLR034C DSF2P38213 736 aa9.69□□□□□ -0.86
SMF3YLR034C ILV3P39522 585 aaKnown RBP9.69□□□□□ -0.86
SMF3YLR034C MAK21Q12176 1025 aaKnown RBP9.69□□□□□ -0.86
SMF3YLR034C PBS2P08018 668 aa9.68□□□□□ -0.86
SMF3YLR034C LEU3P08638 886 aa9.67□□□□□ -0.86
SMF3YLR034C VHR2P40041 505 aa9.67□□□□□ -0.86
SMF3YLR034C KEX1P09620 729 aa9.66□□□□□ -0.86
SMF3YLR034C YDR090CQ03193 310 aa9.66□□□□□ -0.86
SMF3YLR034C FKH1P40466 484 aa9.65□□□□□ -0.86
SMF3YLR034C RTG1P32607 177 aa9.65□□□□□ -0.87
SMF3YLR034C SEC61P32915 480 aa9.64□□□□□ -0.87
SMF3YLR034C COX6P00427 148 aa9.63□□□□□ -0.87
SMF3YLR034C SPB4P25808 606 aaPredicted RBP9.62□□□□□ -0.87
SMF3YLR034C RAD54P32863 898 aa9.58□□□□□ -0.88
SMF3YLR034C PCS60P38137 543 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
SMF3YLR034C SIS1P25294 352 aaKnown RBP9.56□□□□□ -0.88
SMF3YLR034C MAM3Q12296 706 aa9.56□□□□□ -0.88
SMF3YLR034C AIR2Q12476 344 aaKnown RBP9.56□□□□□ -0.88
SMF3YLR034C SLI15P38283 698 aa9.54□□□□□ -0.88
SMF3YLR034C NCR1Q12200 1170 aa9.54□□□□□ -0.88
SMF3YLR034C KIC1P38692 1080 aa9.52□□□□□ -0.89
SMF3YLR034C IES2P40154 320 aa9.51□□□□□ -0.89
SMF3YLR034C NUP42P49686 430 aaKnown RBP9.49□□□□□ -0.89
SMF3YLR034C PML39Q03760 334 aa9.49□□□□□ -0.89
SMF3YLR034C YDL129WQ07555 291 aa9.49□□□□□ -0.89
SMF3YLR034C TFG1P41895 735 aaPredicted RBP9.48□□□□□ -0.89
SMF3YLR034C ORC6P38826 435 aa9.47□□□□□ -0.89
SMF3YLR034C MID1P41821 548 aa9.45□□□□□ -0.9
SMF3YLR034C GAP1P19145 602 aaPredicted RBP9.43□□□□□ -0.9
SMF3YLR034C YNR021WP53723 404 aaKnown RBP9.42□□□□□ -0.9
SMF3YLR034C MPC54Q08550 464 aa9.41□□□□□ -0.9
SMF3YLR034C DIT2P21595 489 aa9.4□□□□□ -0.9
SMF3YLR034C CDC73Q06697 393 aa9.39□□□□□ -0.91
SMF3YLR034C PSE1P32337 1089 aaKnown RBP9.39□□□□□ -0.91
SMF3YLR034C RPN1P38764 993 aaKnown RBP9.39□□□□□ -0.91
SMF3YLR034C DPL1Q05567 589 aa9.39□□□□□ -0.91
SMF3YLR034C RPP1BP10622 106 aaKnown RBP9.38□□□□□ -0.91
SMF3YLR034C SAP30P38429 201 aa9.38□□□□□ -0.91
SMF3YLR034C LEO1P38439 464 aa9.38□□□□□ -0.91
SMF3YLR034C CSC1Q06538 782 aa9.36□□□□□ -0.91
SMF3YLR034C BMT6Q12291 365 aa9.36□□□□□ -0.91
SMF3YLR034C PEX29Q03370 554 aa9.35□□□□□ -0.91
SMF3YLR034C YJL171CP46992 396 aa9.33□□□□□ -0.92
SMF3YLR034C ARH1P48360 493 aa9.33□□□□□ -0.92
SMF3YLR034C TFB4Q12004 338 aa9.32□□□□□ -0.92
SMF3YLR034C AIM7Q12156 149 aa9.32□□□□□ -0.92
SMF3YLR034C RGR1P19263 1082 aa9.31□□□□□ -0.92
SMF3YLR034C YDR344CQ05510 147 aa9.31□□□□□ -0.92
SMF3YLR034C GLC3P32775 704 aa9.31□□□□□ -0.92
SMF3YLR034C MVP1P40959 511 aaKnown RBP9.31□□□□□ -0.92
SMF3YLR034C ISU2Q12056 156 aa9.31□□□□□ -0.92
SMF3YLR034C NMA111P53920 997 aa9.3□□□□□ -0.92
SMF3YLR034C HAP5Q02516 242 aa9.28□□□□□ -0.92
SMF3YLR034C CLB5P30283 435 aa9.24□□□□□ -0.93
SMF3YLR034C PRE3P38624 215 aa9.24□□□□□ -0.93
SMF3YLR034C BNI4P53858 892 aa9.23□□□□□ -0.93
SMF3YLR034C PEX21P50091 288 aa9.22□□□□□ -0.93
SMF3YLR034C ATF2P53296 535 aa9.22□□□□□ -0.93
SMF3YLR034C ELP4Q02884 456 aaKnown RBP9.22□□□□□ -0.93
SMF3YLR034C YPR109WQ06104 294 aa9.22□□□□□ -0.93
SMF3YLR034C CHL1P22516 861 aaPredicted RBP9.21□□□□□ -0.94
SMF3YLR034C SGS1P35187 1447 aa9.2□□□□□ -0.94
SMF3YLR034C KIN1P13185 1064 aa9.2□□□□□ -0.94
SMF3YLR034C SPT23P35210 1082 aa9.2□□□□□ -0.94
SMF3YLR034C TUM1Q08686 304 aaKnown RBP9.19□□□□□ -0.94
SMF3YLR034C TEA1P47988 759 aa9.18□□□□□ -0.94
SMF3YLR034C YRR1Q12172 810 aa9.18□□□□□ -0.94
SMF3YLR034C RAM1P22007 431 aa9.15□□□□□ -0.94
SMF3YLR034C PDR1P12383 1068 aa9.14□□□□□ -0.95
SMF3YLR034C YML082WQ04533 649 aaKnown RBP9.13□□□□□ -0.95
SMF3YLR034C SIT4P20604 311 aa9.11□□□□□ -0.95
SMF3YLR034C PTC2P39966 464 aaKnown RBP9.11□□□□□ -0.95
SMF3YLR034C NUD1P32336 851 aa9.1□□□□□ -0.95
SMF3YLR034C NIS1P53939 407 aa9.1□□□□□ -0.95
SMF3YLR034C INO80P53115 1489 aa9.1□□□□□ -0.95
SMF3YLR034C YPR015CQ12531 247 aa9.09□□□□□ -0.95
SMF3YLR034C STR2P47164 639 aa9.07□□□□□ -0.96
SMF3YLR034C SPA2P23201 1466 aaKnown RBP9.07□□□□□ -0.96
SMF3YLR034C FPK1P53739 893 aa9.05□□□□□ -0.96
SMF3YLR034C ISM1P48526 1002 aa9.05□□□□□ -0.96
SMF3YLR034C RTF1P53064 558 aa9.04□□□□□ -0.96
SMF3YLR034C HST2P53686 357 aa9.04□□□□□ -0.96
SMF3YLR034C BUD20Q08004 166 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms