RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C SNT2P53127 1403 aa15□□□□□ -0.01
POM34YLR018C IFH1P39520 1085 aa14.99□□□□□ -0.01
POM34YLR018C NUP159P40477 1460 aa14.98□□□□□ -0.01
POM34YLR018C RTT106P40161 455 aa14.97□□□□□ -0.01
POM34YLR018C PDR15Q04182 1529 aaKnown RBP14.96□□□□□ -0.02
POM34YLR018C MLP2P40457 1679 aa14.95□□□□□ -0.02
POM34YLR018C NTE1Q04958 1679 aa14.93□□□□□ -0.02
POM34YLR018C ULS1Q08562 1619 aa14.92□□□□□ -0.02
POM34YLR018C RPO21P04050 1733 aaKnown RBP14.9□□□□□ -0.02
POM34YLR018C GEA1P47102 1408 aaPredicted RBP14.83□□□□□ -0.03
POM34YLR018C MET10P39692 1035 aa14.83□□□□□ -0.04
POM34YLR018C GEA2P39993 1459 aaKnown RBP14.82□□□□□ -0.04
POM34YLR018C YRF1-1P0CX20 1796 aa14.81□□□□□ -0.04
POM34YLR018C YRF1-5P0CX21 1796 aa14.81□□□□□ -0.04
POM34YLR018C YRF1-8P0CX22 1796 aa14.81□□□□□ -0.04
POM34YLR018C VPS15P22219 1454 aa14.76□□□□□ -0.05
POM34YLR018C LTE1P07866 1435 aa14.75□□□□□ -0.05
POM34YLR018C IRC20Q06554 1556 aa14.71□□□□□ -0.05
POM34YLR018C NUP157P40064 1391 aaKnown RBP14.67□□□□□ -0.06
POM34YLR018C SPO14P36126 1683 aa14.67□□□□□ -0.06
POM34YLR018C PDR12Q02785 1511 aa14.66□□□□□ -0.06
POM34YLR018C TY3B-GQ99315 1547 aa14.66□□□□□ -0.06
POM34YLR018C CAT8P39113 1433 aa14.63□□□□□ -0.07
POM34YLR018C IKI3Q06706 1349 aaKnown RBP14.62□□□□□ -0.07
POM34YLR018C GDB1Q06625 1536 aa14.6□□□□□ -0.07
POM34YLR018C PDR10P51533 1564 aa14.58□□□□□ -0.08
POM34YLR018C CKB1P43639 278 aa14.57□□□□□ -0.08
POM34YLR018C ITT1Q04638 464 aa14.56□□□□□ -0.08
POM34YLR018C YBT1P32386 1661 aa14.55□□□□□ -0.08
POM34YLR018C DRS2P39524 1355 aa14.54□□□□□ -0.08
POM34YLR018C IQG1Q12280 1495 aa14.51□□□□□ -0.09
POM34YLR018C NUP170P38181 1502 aa14.5□□□□□ -0.09
POM34YLR018C SSM4P40318 1319 aa14.47□□□□□ -0.09
POM34YLR018C ARO1P08566 1588 aaKnown RBP14.47□□□□□ -0.09
POM34YLR018C BNI1P41832 1953 aa14.45□□□□□ -0.1
POM34YLR018C BUD3P25558 1636 aa14.43□□□□□ -0.1
POM34YLR018C SRB8P25648 1427 aa14.41□□□□□ -0.1
POM34YLR018C YSP2Q06681 1438 aa14.4□□□□□ -0.1
POM34YLR018C MMS1Q06211 1407 aa14.35□□□□□ -0.11
POM34YLR018C BUD21Q08492 214 aaPredicted RBP14.33□□□□□ -0.12
POM34YLR018C BNR1P40450 1375 aa14.32□□□□□ -0.12
POM34YLR018C TRM3Q07527 1436 aa14.32□□□□□ -0.12
POM34YLR018C DOP1Q03921 1698 aa14.27□□□□□ -0.12
POM34YLR018C SEC7P11075 2009 aaKnown RBP14.22□□□□□ -0.13
POM34YLR018C CHC1P22137 1653 aaKnown RBP14.15□□□□□ -0.14
POM34YLR018C ABP1P15891 592 aaKnown RBP14.12□□□□□ -0.15
POM34YLR018C DNF2Q12675 1612 aa14.08□□□□□ -0.15
POM34YLR018C GCN2P15442 1659 aa14.01□□□□□ -0.17
POM34YLR018C URN1Q06525 465 aaKnown RBP14□□□□□ -0.17
POM34YLR018C YAP3P38749 330 aa13.99□□□□□ -0.17
POM34YLR018C YOR093CQ12275 1648 aa13.95□□□□□ -0.18
POM34YLR018C PAF1P38351 445 aa13.94□□□□□ -0.18
POM34YLR018C IPL1P38991 367 aa13.93□□□□□ -0.18
POM34YLR018C TYS1P36421 394 aaKnown RBP13.91□□□□□ -0.18
POM34YLR018C NOP7P53261 605 aaKnown RBP13.91□□□□□ -0.18
POM34YLR018C VMR1P38735 1592 aa13.91□□□□□ -0.18
POM34YLR018C NUP188P52593 1655 aaKnown RBP13.91□□□□□ -0.18
POM34YLR018C PDR5P33302 1511 aaKnown RBP13.89□□□□□ -0.19
POM34YLR018C PDR11P40550 1411 aa13.88□□□□□ -0.19
POM34YLR018C BFR2Q06631 534 aaKnown RBP13.86□□□□□ -0.19
POM34YLR018C IML1P47170 1584 aa13.86□□□□□ -0.19
POM34YLR018C RAV1P47104 1357 aa13.8□□□□□ -0.2
POM34YLR018C MIF2P35201 549 aa13.79□□□□□ -0.2
POM34YLR018C DNF3Q12674 1656 aa13.77□□□□□ -0.21
POM34YLR018C RTC1Q08281 1341 aa13.75□□□□□ -0.21
POM34YLR018C MAK10Q02197 733 aa13.74□□□□□ -0.21
POM34YLR018C TAF5P38129 798 aa13.65□□□□□ -0.22
POM34YLR018C HAP1P0CE41 1502 aa13.63□□□□□ -0.23
POM34YLR018C ORC1P54784 914 aaPredicted RBP13.61□□□□□ -0.23
POM34YLR018C ESL2P36168 1195 aa13.6□□□□□ -0.23
POM34YLR018C RAD9P14737 1309 aa13.59□□□□□ -0.23
POM34YLR018C POL5P39985 1022 aaKnown RBP13.58□□□□□ -0.24
POM34YLR018C ALD4P46367 519 aaKnown RBP13.58□□□□□ -0.24
POM34YLR018C NUP192P47054 1683 aa13.57□□□□□ -0.24
POM34YLR018C MRX12P47084 519 aa13.57□□□□□ -0.24
POM34YLR018C CAB1Q04430 367 aa13.57□□□□□ -0.24
POM34YLR018C KRE5P22023 1365 aa13.55□□□□□ -0.24
POM34YLR018C RIA1P53893 1110 aa13.53□□□□□ -0.24
POM34YLR018C BCK1Q01389 1478 aa13.52□□□□□ -0.25
POM34YLR018C KIP3P53086 805 aaKnown RBP13.51□□□□□ -0.25
POM34YLR018C TAF8Q03750 510 aa13.5□□□□□ -0.25
POM34YLR018C TY3B-IQ7LHG5 1498 aaKnown RBP13.46□□□□□ -0.25
POM34YLR018C NAP1P25293 417 aaKnown RBP13.45□□□□□ -0.26
POM34YLR018C SPE2P21182 396 aa13.44□□□□□ -0.26
POM34YLR018C CFT1Q06632 1357 aaKnown RBP13.44□□□□□ -0.26
POM34YLR018C USO1P25386 1790 aa13.43□□□□□ -0.26
POM34YLR018C YFR006WP43590 535 aa13.42□□□□□ -0.26
POM34YLR018C YMR196WQ04336 1088 aa13.42□□□□□ -0.26
POM34YLR018C YNR029CP53729 429 aaKnown RBP13.39□□□□□ -0.27
POM34YLR018C THI12P42883 340 aa13.38□□□□□ -0.27
POM34YLR018C THI5P43534 340 aa13.38□□□□□ -0.27
POM34YLR018C THI11P47183 340 aa13.38□□□□□ -0.27
POM34YLR018C THI13Q07748 340 aa13.38□□□□□ -0.27
POM34YLR018C TY1B-NL2Q99337 1749 aaKnown RBP13.38□□□□□ -0.27
POM34YLR018C YLR419WQ06698 1435 aaKnown RBP13.38□□□□□ -0.27
POM34YLR018C CHZ1P40019 153 aaPredicted RBP13.33□□□□□ -0.28
POM34YLR018C RCM1P53972 490 aa13.32□□□□□ -0.28
POM34YLR018C SCT1P32784 759 aa13.31□□□□□ -0.28
POM34YLR018C MHP1P43638 1398 aa13.3□□□□□ -0.28
POM34YLR018C PPH3P32345 308 aa13.26□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms