RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	PTC3	P34221	468 aa	Known RBP	4.39	□□□□□ -1.71
NUP120	YKL057C	STS1	P38637	319 aa		4.39	□□□□□ -1.71
NUP120	YKL057C	VPS29	P38759	282 aa		4.38	□□□□□ -1.71
NUP120	YKL057C	VMA1	P17255	1071 aa	Known RBP	4.37	□□□□□ -1.71
NUP120	YKL057C	YJL171C	P46992	396 aa		4.36	□□□□□ -1.71
NUP120	YKL057C	NPL4	P33755	580 aa		4.36	□□□□□ -1.71
NUP120	YKL057C	ULI1	P43604	169 aa		4.35	□□□□□ -1.71
NUP120	YKL057C	LEU3	P08638	886 aa		4.35	□□□□□ -1.71
NUP120	YKL057C	GUT1	P32190	709 aa		4.35	□□□□□ -1.71
NUP120	YKL057C	BRL1	P38770	471 aa		4.33	□□□□□ -1.72
NUP120	YKL057C	YOL036W	Q08206	761 aa		4.33	□□□□□ -1.72
NUP120	YKL057C	SIS1	P25294	352 aa	Known RBP	4.33	□□□□□ -1.72
NUP120	YKL057C	EAP1	P36041	632 aa	Known RBP	4.33	□□□□□ -1.72
NUP120	YKL057C	DMA2	P53924	522 aa		4.32	□□□□□ -1.72
NUP120	YKL057C	EDS1	P38073	919 aa		4.32	□□□□□ -1.72
NUP120	YKL057C	MAK21	Q12176	1025 aa	Known RBP	4.32	□□□□□ -1.72
NUP120	YKL057C	ELP4	Q02884	456 aa	Known RBP	4.31	□□□□□ -1.72
NUP120	YKL057C	YBL029C-A	Q3E756	94 aa		4.3	□□□□□ -1.72
NUP120	YKL057C	KIN1	P13185	1064 aa		4.3	□□□□□ -1.72
NUP120	YKL057C	ABP1	P15891	592 aa	Known RBP	4.3	□□□□□ -1.72
NUP120	YKL057C	TBF1	Q02457	562 aa		4.3	□□□□□ -1.72
NUP120	YKL057C	YNR021W	P53723	404 aa	Known RBP	4.26	□□□□□ -1.73
NUP120	YKL057C	TEA1	P47988	759 aa		4.25	□□□□□ -1.73
NUP120	YKL057C	SAS10	Q12136	610 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP120	YKL057C	YBL036C	P38197	257 aa		4.25	□□□□□ -1.73
NUP120	YKL057C	MSB4	Q12317	492 aa		4.24	□□□□□ -1.73
NUP120	YKL057C	TIF11	P38912	153 aa	Known RBP	4.24	□□□□□ -1.73
NUP120	YKL057C	YEL023C	P39992	682 aa		4.24	□□□□□ -1.73
NUP120	YKL057C	NOP53	Q12080	455 aa	Known RBP	4.24	□□□□□ -1.73
NUP120	YKL057C	SSA2	P10592	639 aa	Known RBP	4.23	□□□□□ -1.73
NUP120	YKL057C	ARG8	P18544	423 aa		4.23	□□□□□ -1.73
NUP120	YKL057C	SAP30	P38429	201 aa		4.22	□□□□□ -1.73
NUP120	YKL057C	TUM1	Q08686	304 aa	Known RBP	4.22	□□□□□ -1.73
NUP120	YKL057C	GCD11	P32481	527 aa	Known RBP	4.21	□□□□□ -1.73
NUP120	YKL057C	RTG1	P32607	177 aa		4.21	□□□□□ -1.73
NUP120	YKL057C	YJL007C	P47080	104 aa		4.21	□□□□□ -1.73
NUP120	YKL057C	CSN12	P47130	423 aa		4.21	□□□□□ -1.73
NUP120	YKL057C	PML39	Q03760	334 aa		4.21	□□□□□ -1.73
NUP120	YKL057C	TRP5	P00931	707 aa	Known RBP	4.21	□□□□□ -1.74
NUP120	YKL057C	DIT2	P21595	489 aa		4.21	□□□□□ -1.74
NUP120	YKL057C	YGR273C	P53329	174 aa		4.21	□□□□□ -1.74
NUP120	YKL057C	PKH3	Q03306	898 aa	Predicted RBP	4.21	□□□□□ -1.74
NUP120	YKL057C	PAT1	P25644	796 aa	Known RBP	4.21	□□□□□ -1.74
NUP120	YKL057C	UBP14	P38237	781 aa	Known RBP	4.21	□□□□□ -1.74
NUP120	YKL057C	YPR109W	Q06104	294 aa		4.21	□□□□□ -1.74
NUP120	YKL057C	KEX1	P09620	729 aa		4.2	□□□□□ -1.74
NUP120	YKL057C	YRR1	Q12172	810 aa		4.2	□□□□□ -1.74
NUP120	YKL057C	CLB5	P30283	435 aa		4.19	□□□□□ -1.74
NUP120	YKL057C	DSF2	P38213	736 aa		4.19	□□□□□ -1.74
NUP120	YKL057C	JIP4	Q03361	876 aa		4.19	□□□□□ -1.74
NUP120	YKL057C	YNL035C	P53962	389 aa	Known RBP	4.19	□□□□□ -1.74
NUP120	YKL057C	NCR1	Q12200	1170 aa		4.19	□□□□□ -1.74
NUP120	YKL057C	COX6	P00427	148 aa		4.18	□□□□□ -1.74
NUP120	YKL057C	YPR148C	Q06523	435 aa		4.18	□□□□□ -1.74
NUP120	YKL057C	LDB19	Q12502	818 aa		4.18	□□□□□ -1.74
NUP120	YKL057C	SLY41	P22215	453 aa		4.16	□□□□□ -1.74
NUP120	YKL057C	MMP1	Q12372	583 aa		4.16	□□□□□ -1.74
NUP120	YKL057C	GLN1	P32288	370 aa	Known RBP	4.16	□□□□□ -1.74
NUP120	YKL057C	CSC1	Q06538	782 aa		4.15	□□□□□ -1.74
NUP120	YKL057C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
NUP120	YKL057C	YLR326W	Q06170	240 aa	Known RBP	4.15	□□□□□ -1.75
NUP120	YKL057C	CDC73	Q06697	393 aa		4.15	□□□□□ -1.75
NUP120	YKL057C	TYW1	Q08960	810 aa	Known RBP	4.15	□□□□□ -1.75
NUP120	YKL057C	SAM3	Q08986	587 aa		4.15	□□□□□ -1.75
NUP120	YKL057C	VNX1	P42839	908 aa		4.15	□□□□□ -1.75
NUP120	YKL057C	YPR204W	Q08995	1032 aa		4.15	□□□□□ -1.75
NUP120	YKL057C	PTC4	P38089	393 aa		4.14	□□□□□ -1.75
NUP120	YKL057C	DAN4	P47179	1161 aa		4.14	□□□□□ -1.75
NUP120	YKL057C	GYP1	Q08484	637 aa		4.14	□□□□□ -1.75
NUP120	YKL057C	YDL129W	Q07555	291 aa		4.13	□□□□□ -1.75
NUP120	YKL057C	MID1	P41821	548 aa		4.13	□□□□□ -1.75
NUP120	YKL057C	RPL34A	P87262	121 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP120	YKL057C	AIM7	Q12156	149 aa		4.12	□□□□□ -1.75
NUP120	YKL057C	ESS1	P22696	170 aa		4.12	□□□□□ -1.75
NUP120	YKL057C	KTR7	P40504	517 aa		4.12	□□□□□ -1.75
NUP120	YKL057C	TFB3	Q03290	321 aa		4.12	□□□□□ -1.75
NUP120	YKL057C	DPL1	Q05567	589 aa		4.12	□□□□□ -1.75
NUP120	YKL057C	RLF2	Q12495	606 aa		4.12	□□□□□ -1.75
NUP120	YKL057C	ENV9	Q08651	330 aa		4.11	□□□□□ -1.75
NUP120	YKL057C	PTC2	P39966	464 aa	Known RBP	4.11	□□□□□ -1.75
NUP120	YKL057C	TFB4	Q12004	338 aa		4.11	□□□□□ -1.75
NUP120	YKL057C	BMT6	Q12291	365 aa		4.11	□□□□□ -1.75
NUP120	YKL057C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
NUP120	YKL057C	PSE1	P32337	1089 aa	Known RBP	4.1	□□□□□ -1.75
NUP120	YKL057C	SPT16	P32558	1035 aa	Known RBP	4.1	□□□□□ -1.75
NUP120	YKL057C	ISU2	Q12056	156 aa		4.1	□□□□□ -1.75
NUP120	YKL057C	MPH3	P0CE00	602 aa		4.09	□□□□□ -1.75
NUP120	YKL057C	GUA1	P38625	525 aa	Known RBP	4.08	□□□□□ -1.76
NUP120	YKL057C	NMA111	P53920	997 aa		4.08	□□□□□ -1.76
NUP120	YKL057C	AI4	P03878	556 aa		4.08	□□□□□ -1.76
NUP120	YKL057C	KIP2	P28743	706 aa		4.08	□□□□□ -1.76
NUP120	YKL057C	SLI15	P38283	698 aa		4.08	□□□□□ -1.76
NUP120	YKL057C	KXD1	P53158	218 aa		4.08	□□□□□ -1.76
NUP120	YKL057C	NUD1	P32336	851 aa		4.07	□□□□□ -1.76
NUP120	YKL057C	SCJ1	P25303	377 aa		4.06	□□□□□ -1.76
NUP120	YKL057C	SEC61	P32915	480 aa		4.06	□□□□□ -1.76
NUP120	YKL057C	ERG12	P07277	443 aa		4.05	□□□□□ -1.76
NUP120	YKL057C	KEX2	P13134	814 aa		4.05	□□□□□ -1.76
NUP120	YKL057C	HAP5	Q02516	242 aa		4.05	□□□□□ -1.76
NUP120	YKL057C	MPC54	Q08550	464 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 109.8 ms