RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W TRP5P00931 707 aaKnown RBP9.37□□□□□ -0.91
PTM1YKL039W SOL3P38858 249 aa9.35□□□□□ -0.91
PTM1YKL039W IOC2Q12072 812 aa9.35□□□□□ -0.91
PTM1YKL039W NST1P53935 1240 aa9.33□□□□□ -0.92
PTM1YKL039W CKB1P43639 278 aa9.32□□□□□ -0.92
PTM1YKL039W YGR273CP53329 174 aa9.31□□□□□ -0.92
PTM1YKL039W YEL023CP39992 682 aa9.29□□□□□ -0.92
PTM1YKL039W LDB19Q12502 818 aa9.28□□□□□ -0.92
PTM1YKL039W REF2P42073 533 aaPredicted RBP9.27□□□□□ -0.93
PTM1YKL039W JIP4Q03361 876 aa9.24□□□□□ -0.93
PTM1YKL039W ILV3P39522 585 aaKnown RBP9.24□□□□□ -0.93
PTM1YKL039W PTC4P38089 393 aa9.23□□□□□ -0.93
PTM1YKL039W UBP14P38237 781 aaKnown RBP9.23□□□□□ -0.93
PTM1YKL039W VHR2P40041 505 aa9.23□□□□□ -0.93
PTM1YKL039W YNL035CP53962 389 aaKnown RBP9.23□□□□□ -0.93
PTM1YKL039W YLR326WQ06170 240 aaKnown RBP9.23□□□□□ -0.93
PTM1YKL039W AI4P03878 556 aa9.22□□□□□ -0.93
PTM1YKL039W DAN4P47179 1161 aa9.22□□□□□ -0.93
PTM1YKL039W MPH3P0CE00 602 aa9.21□□□□□ -0.93
PTM1YKL039W RTG1P32607 177 aa9.2□□□□□ -0.94
PTM1YKL039W FKH1P40466 484 aa9.2□□□□□ -0.94
PTM1YKL039W PBS2P08018 668 aa9.2□□□□□ -0.94
PTM1YKL039W KEX1P09620 729 aa9.2□□□□□ -0.94
PTM1YKL039W SIS1P25294 352 aaKnown RBP9.18□□□□□ -0.94
PTM1YKL039W YDR090CQ03193 310 aa9.17□□□□□ -0.94
PTM1YKL039W SEC61P32915 480 aa9.16□□□□□ -0.94
PTM1YKL039W DSF2P38213 736 aa9.16□□□□□ -0.94
PTM1YKL039W SPB4P25808 606 aaPredicted RBP9.15□□□□□ -0.95
PTM1YKL039W MAK21Q12176 1025 aaKnown RBP9.15□□□□□ -0.95
PTM1YKL039W COX6P00427 148 aa9.12□□□□□ -0.95
PTM1YKL039W RAD54P32863 898 aa9.12□□□□□ -0.95
PTM1YKL039W PCS60P38137 543 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
PTM1YKL039W AIR2Q12476 344 aaKnown RBP9.12□□□□□ -0.95
PTM1YKL039W LEU3P08638 886 aa9.11□□□□□ -0.95
PTM1YKL039W NCR1Q12200 1170 aa9.1□□□□□ -0.95
PTM1YKL039W SLI15P38283 698 aa9.08□□□□□ -0.96
PTM1YKL039W MAM3Q12296 706 aa9.08□□□□□ -0.96
PTM1YKL039W KIC1P38692 1080 aa9.07□□□□□ -0.96
PTM1YKL039W PML39Q03760 334 aa9.07□□□□□ -0.96
PTM1YKL039W IES2P40154 320 aa9.05□□□□□ -0.96
PTM1YKL039W TFG1P41895 735 aaPredicted RBP9.04□□□□□ -0.96
PTM1YKL039W YDL129WQ07555 291 aa9.04□□□□□ -0.96
PTM1YKL039W MID1P41821 548 aa9.03□□□□□ -0.96
PTM1YKL039W NUP42P49686 430 aaKnown RBP9□□□□□ -0.97
PTM1YKL039W SAP30P38429 201 aa8.98□□□□□ -0.97
PTM1YKL039W ORC6P38826 435 aa8.98□□□□□ -0.97
PTM1YKL039W CDC73Q06697 393 aa8.96□□□□□ -0.97
PTM1YKL039W MPC54Q08550 464 aa8.96□□□□□ -0.97
PTM1YKL039W BMT6Q12291 365 aa8.95□□□□□ -0.98
PTM1YKL039W DIT2P21595 489 aa8.94□□□□□ -0.98
PTM1YKL039W YJL171CP46992 396 aa8.94□□□□□ -0.98
PTM1YKL039W PEX29Q03370 554 aa8.94□□□□□ -0.98
PTM1YKL039W GAP1P19145 602 aaPredicted RBP8.93□□□□□ -0.98
PTM1YKL039W YDR344CQ05510 147 aa8.92□□□□□ -0.98
PTM1YKL039W DPL1Q05567 589 aa8.92□□□□□ -0.98
PTM1YKL039W YNR021WP53723 404 aaKnown RBP8.9□□□□□ -0.98
PTM1YKL039W RPP1BP10622 106 aaKnown RBP8.9□□□□□ -0.99
PTM1YKL039W PSE1P32337 1089 aaKnown RBP8.89□□□□□ -0.99
PTM1YKL039W CSC1Q06538 782 aa8.87□□□□□ -0.99
PTM1YKL039W ARH1P48360 493 aa8.86□□□□□ -0.99
PTM1YKL039W GLC3P32775 704 aa8.86□□□□□ -0.99
PTM1YKL039W RPN1P38764 993 aaKnown RBP8.86□□□□□ -0.99
PTM1YKL039W NMA111P53920 997 aa8.86□□□□□ -0.99
PTM1YKL039W RGR1P19263 1082 aa8.84□□□□□ -0.99
PTM1YKL039W MVP1P40959 511 aaKnown RBP8.84□□□□□ -0.99
PTM1YKL039W ISU2Q12056 156 aa8.84□□□□□ -0.99
PTM1YKL039W HAP5Q02516 242 aa8.83□□□□□ -1
PTM1YKL039W TFB4Q12004 338 aa8.83□□□□□ -1
PTM1YKL039W LEO1P38439 464 aa8.81□□□□□ -1
PTM1YKL039W ELP4Q02884 456 aaKnown RBP8.81□□□□□ -1
PTM1YKL039W PRE3P38624 215 aa8.8□□□□□ -1
PTM1YKL039W AIM7Q12156 149 aa8.8□□□□□ -1
PTM1YKL039W PEX21P50091 288 aa8.79□□□□□ -1
PTM1YKL039W BNI4P53858 892 aa8.77□□□□□ -1.01
PTM1YKL039W YPR109WQ06104 294 aa8.77□□□□□ -1.01
PTM1YKL039W TUM1Q08686 304 aaKnown RBP8.77□□□□□ -1.01
PTM1YKL039W CHL1P22516 861 aaPredicted RBP8.76□□□□□ -1.01
PTM1YKL039W YRR1Q12172 810 aa8.76□□□□□ -1.01
PTM1YKL039W ATF2P53296 535 aa8.75□□□□□ -1.01
PTM1YKL039W CLB5P30283 435 aa8.74□□□□□ -1.01
PTM1YKL039W SPT23P35210 1082 aa8.74□□□□□ -1.01
PTM1YKL039W PDR1P12383 1068 aa8.72□□□□□ -1.01
PTM1YKL039W TEA1P47988 759 aa8.72□□□□□ -1.01
PTM1YKL039W KIN1P13185 1064 aa8.71□□□□□ -1.02
PTM1YKL039W RAM1P22007 431 aa8.7□□□□□ -1.02
PTM1YKL039W PTC2P39966 464 aaKnown RBP8.68□□□□□ -1.02
PTM1YKL039W NUD1P32336 851 aa8.66□□□□□ -1.02
PTM1YKL039W YPR015CQ12531 247 aa8.66□□□□□ -1.02
PTM1YKL039W YML082WQ04533 649 aaKnown RBP8.65□□□□□ -1.02
PTM1YKL039W NIS1P53939 407 aa8.65□□□□□ -1.03
PTM1YKL039W STR2P47164 639 aa8.63□□□□□ -1.03
PTM1YKL039W ISM1P48526 1002 aa8.61□□□□□ -1.03
PTM1YKL039W SIT4P20604 311 aa8.61□□□□□ -1.03
PTM1YKL039W FPK1P53739 893 aa8.6□□□□□ -1.03
PTM1YKL039W YMR196WQ04336 1088 aa8.57□□□□□ -1.04
PTM1YKL039W BUD20Q08004 166 aaPredicted RBP8.57□□□□□ -1.04
PTM1YKL039W NPL4P33755 580 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-DR4O74302 440 aa8.56□□□□□ -1.04
PTM1YKL039W TY1A-HP0C2I4 478 aaKnown RBP8.56□□□□□ -1.04
PTM1YKL039W TY1A-AP0CX57 440 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms