RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C BCK2P33306 851 aa5.73□□□□□ -1.49
VPS55YJR044C YEL023CP39992 682 aa5.73□□□□□ -1.49
VPS55YJR044C CHL1P22516 861 aaPredicted RBP5.71□□□□□ -1.5
VPS55YJR044C YDR344CQ05510 147 aa5.71□□□□□ -1.5
VPS55YJR044C PTC4P38089 393 aa5.7□□□□□ -1.5
VPS55YJR044C PRE3P38624 215 aa5.7□□□□□ -1.5
VPS55YJR044C PML39Q03760 334 aa5.64□□□□□ -1.51
VPS55YJR044C GRE2Q12068 342 aaKnown RBP5.64□□□□□ -1.51
VPS55YJR044C MIF2P35201 549 aa5.63□□□□□ -1.51
VPS55YJR044C VRP1P37370 817 aa5.61□□□□□ -1.51
VPS55YJR044C EDS1P38073 919 aa5.61□□□□□ -1.51
VPS55YJR044C ELP4Q02884 456 aaKnown RBP5.6□□□□□ -1.51
VPS55YJR044C RAM2P29703 316 aa5.59□□□□□ -1.51
VPS55YJR044C PTC3P34221 468 aaKnown RBP5.58□□□□□ -1.52
VPS55YJR044C MID1P41821 548 aa5.58□□□□□ -1.52
VPS55YJR044C ATH1P48016 1211 aa5.58□□□□□ -1.52
VPS55YJR044C MAK11P20484 414 aaKnown RBP5.56□□□□□ -1.52
VPS55YJR044C GUT1P32190 709 aa5.56□□□□□ -1.52
VPS55YJR044C XDJ1P39102 459 aa5.56□□□□□ -1.52
VPS55YJR044C NST1P53935 1240 aa5.55□□□□□ -1.52
VPS55YJR044C SOL3P38858 249 aa5.53□□□□□ -1.52
VPS55YJR044C COQ8P27697 501 aa5.52□□□□□ -1.53
VPS55YJR044C ARH1P48360 493 aa5.51□□□□□ -1.53
VPS55YJR044C ILV3P39522 585 aaKnown RBP5.5□□□□□ -1.53
VPS55YJR044C DPS1P04802 557 aaKnown RBP5.49□□□□□ -1.53
VPS55YJR044C PEX29Q03370 554 aa5.49□□□□□ -1.53
VPS55YJR044C MPH3P0CE00 602 aa5.47□□□□□ -1.53
VPS55YJR044C AI4P03878 556 aa5.45□□□□□ -1.54
VPS55YJR044C SPT23P35210 1082 aa5.45□□□□□ -1.54
VPS55YJR044C HAP5Q02516 242 aa5.43□□□□□ -1.54
VPS55YJR044C MPC54Q08550 464 aa5.41□□□□□ -1.54
VPS55YJR044C YGR273CP53329 174 aa5.4□□□□□ -1.54
VPS55YJR044C BNI4P53858 892 aa5.39□□□□□ -1.55
VPS55YJR044C SRC1Q03707 834 aa5.39□□□□□ -1.55
VPS55YJR044C PTC2P39966 464 aaKnown RBP5.38□□□□□ -1.55
VPS55YJR044C SLI15P38283 698 aa5.36□□□□□ -1.55
VPS55YJR044C NMA111P53920 997 aa5.36□□□□□ -1.55
VPS55YJR044C YML082WQ04533 649 aaKnown RBP5.35□□□□□ -1.55
VPS55YJR044C DPL1Q05567 589 aa5.32□□□□□ -1.56
VPS55YJR044C YPR015CQ12531 247 aa5.32□□□□□ -1.56
VPS55YJR044C RAS1P01119 309 aa5.3□□□□□ -1.56
VPS55YJR044C NOP53Q12080 455 aaKnown RBP5.3□□□□□ -1.56
VPS55YJR044C KEX1P09620 729 aa5.28□□□□□ -1.56
VPS55YJR044C RAM1P22007 431 aa5.27□□□□□ -1.57
VPS55YJR044C CDC73Q06697 393 aa5.27□□□□□ -1.57
VPS55YJR044C PDR1P12383 1068 aa5.24□□□□□ -1.57
VPS55YJR044C ISU2Q12056 156 aa5.23□□□□□ -1.57
VPS55YJR044C GYP1Q08484 637 aa5.22□□□□□ -1.57
VPS55YJR044C VHR2P40041 505 aa5.21□□□□□ -1.58
VPS55YJR044C YLR326WQ06170 240 aaKnown RBP5.21□□□□□ -1.58
VPS55YJR044C RGA2Q06407 1009 aa5.21□□□□□ -1.58
VPS55YJR044C SDH2P21801 266 aa5.2□□□□□ -1.58
VPS55YJR044C UBP14P38237 781 aaKnown RBP5.19□□□□□ -1.58
VPS55YJR044C AMS1P22855 1083 aa5.18□□□□□ -1.58
VPS55YJR044C PCS60P38137 543 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
VPS55YJR044C SET1P38827 1080 aaKnown RBP5.18□□□□□ -1.58
VPS55YJR044C RGA1P39083 1007 aa5.18□□□□□ -1.58
VPS55YJR044C TRK1P12685 1235 aa5.15□□□□□ -1.59
VPS55YJR044C RAD54P32863 898 aa5.14□□□□□ -1.59
VPS55YJR044C SAS4Q04003 481 aa5.1□□□□□ -1.59
VPS55YJR044C BUD20Q08004 166 aaPredicted RBP5.09□□□□□ -1.59
VPS55YJR044C YRR1Q12172 810 aa5.09□□□□□ -1.59
VPS55YJR044C YDR090CQ03193 310 aa5.08□□□□□ -1.6
VPS55YJR044C YEL077CQ3E7X8 1277 aa5.08□□□□□ -1.6
VPS55YJR044C STR2P47164 639 aa5.07□□□□□ -1.6
VPS55YJR044C RPP1BP10622 106 aaKnown RBP5.06□□□□□ -1.6
VPS55YJR044C ISM1P48526 1002 aa5.05□□□□□ -1.6
VPS55YJR044C PEX21P50091 288 aa5.05□□□□□ -1.6
VPS55YJR044C PRT1P06103 763 aaKnown RBP5.04□□□□□ -1.6
VPS55YJR044C KIC1P38692 1080 aa5.04□□□□□ -1.6
VPS55YJR044C MRF1P30775 413 aaPredicted RBP5.03□□□□□ -1.6
VPS55YJR044C AIR1P40507 360 aaKnown RBP5.03□□□□□ -1.6
VPS55YJR044C CLA4P48562 842 aa5.03□□□□□ -1.6
VPS55YJR044C TUM1Q08686 304 aaKnown RBP5.03□□□□□ -1.6
VPS55YJR044C GAP1P19145 602 aaPredicted RBP5.02□□□□□ -1.61
VPS55YJR044C NUD1P32336 851 aa5.02□□□□□ -1.61
VPS55YJR044C CST6P40535 587 aa5.02□□□□□ -1.61
VPS55YJR044C TY1A-DR4O74302 440 aa4.99□□□□□ -1.61
VPS55YJR044C ERG12P07277 443 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-HP0C2I4 478 aaKnown RBP4.99□□□□□ -1.61
VPS55YJR044C TY1A-AP0CX57 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-PR1P0CX58 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-ORP0CX59 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-PR2P0CX60 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-DR5P0CX65 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-ER2P0CX66 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-GR3P0CX67 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-LR1P0CX68 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-MR2P0CX69 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-JR2P47099 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-DR1Q03856 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-ML1Q04706 440 aaKnown RBP4.99□□□□□ -1.61
VPS55YJR044C CSC1Q06538 782 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-BRQ12217 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-NL2Q12470 440 aa4.99□□□□□ -1.61
VPS55YJR044C TY1A-GR2Q12485 440 aa4.99□□□□□ -1.61
VPS55YJR044C TFB4Q12004 338 aa4.98□□□□□ -1.61
VPS55YJR044C SEC2P17065 759 aa4.97□□□□□ -1.61
VPS55YJR044C GCD11P32481 527 aaKnown RBP4.97□□□□□ -1.61
VPS55YJR044C ORC6P38826 435 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms