RNA–Protein interactions for RNA: YJL148W

RPA34, Transcript of RNA polymerase I subunit A34.5, yeastyeast

Gene RPA34, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA34YJL148W PTC4P38089 393 aa6.64□□□□□ -1.35
RPA34YJL148W YEL023CP39992 682 aa6.63□□□□□ -1.35
RPA34YJL148W MGA2P40578 1113 aa6.63□□□□□ -1.35
RPA34YJL148W DCW1P36091 449 aa6.62□□□□□ -1.35
RPA34YJL148W XDJ1P39102 459 aa6.62□□□□□ -1.35
RPA34YJL148W RCR1P38212 213 aa6.61□□□□□ -1.35
RPA34YJL148W VRP1P37370 817 aa6.59□□□□□ -1.35
RPA34YJL148W YDR344CQ05510 147 aa6.56□□□□□ -1.36
RPA34YJL148W DPS1P04802 557 aaKnown RBP6.52□□□□□ -1.37
RPA34YJL148W ELP4Q02884 456 aaKnown RBP6.51□□□□□ -1.37
RPA34YJL148W PML39Q03760 334 aa6.51□□□□□ -1.37
RPA34YJL148W RGA2Q06407 1009 aa6.49□□□□□ -1.37
RPA34YJL148W GRE2Q12068 342 aaKnown RBP6.47□□□□□ -1.37
RPA34YJL148W ARH1P48360 493 aa6.46□□□□□ -1.38
RPA34YJL148W SRC1Q03707 834 aa6.41□□□□□ -1.38
RPA34YJL148W GUT1P32190 709 aa6.38□□□□□ -1.39
RPA34YJL148W SPT23P35210 1082 aa6.38□□□□□ -1.39
RPA34YJL148W NST1P53935 1240 aa6.38□□□□□ -1.39
RPA34YJL148W MID1P41821 548 aa6.37□□□□□ -1.39
RPA34YJL148W ATH1P48016 1211 aa6.37□□□□□ -1.39
RPA34YJL148W RGA1P39083 1007 aa6.35□□□□□ -1.39
RPA34YJL148W PTC3P34221 468 aaKnown RBP6.34□□□□□ -1.39
RPA34YJL148W MIF2P35201 549 aa6.33□□□□□ -1.4
RPA34YJL148W PEX29Q03370 554 aa6.33□□□□□ -1.4
RPA34YJL148W MAK11P20484 414 aaKnown RBP6.32□□□□□ -1.4
RPA34YJL148W EDS1P38073 919 aa6.32□□□□□ -1.4
RPA34YJL148W HAP5Q02516 242 aa6.32□□□□□ -1.4
RPA34YJL148W BNI4P53858 892 aa6.31□□□□□ -1.4
RPA34YJL148W AI4P03878 556 aa6.3□□□□□ -1.4
RPA34YJL148W MPH3P0CE00 602 aa6.3□□□□□ -1.4
RPA34YJL148W SOL3P38858 249 aa6.3□□□□□ -1.4
RPA34YJL148W YML082WQ04533 649 aaKnown RBP6.29□□□□□ -1.4
RPA34YJL148W ILV3P39522 585 aaKnown RBP6.26□□□□□ -1.41
RPA34YJL148W PTC2P39966 464 aaKnown RBP6.26□□□□□ -1.41
RPA34YJL148W RAM2P29703 316 aa6.23□□□□□ -1.41
RPA34YJL148W MPC54Q08550 464 aa6.22□□□□□ -1.41
RPA34YJL148W COQ8P27697 501 aa6.21□□□□□ -1.42
RPA34YJL148W RAS1P01119 309 aa6.17□□□□□ -1.42
RPA34YJL148W NMA111P53920 997 aa6.16□□□□□ -1.42
RPA34YJL148W YGR273CP53329 174 aa6.15□□□□□ -1.42
RPA34YJL148W YPR015CQ12531 247 aa6.12□□□□□ -1.43
RPA34YJL148W SLI15P38283 698 aa6.11□□□□□ -1.43
RPA34YJL148W DPL1Q05567 589 aa6.11□□□□□ -1.43
RPA34YJL148W NOP53Q12080 455 aaKnown RBP6.11□□□□□ -1.43
RPA34YJL148W TRK1P12685 1235 aa6.1□□□□□ -1.43
RPA34YJL148W RAM1P22007 431 aa6.09□□□□□ -1.43
RPA34YJL148W AMS1P22855 1083 aa6.08□□□□□ -1.44
RPA34YJL148W GYP1Q08484 637 aa6.03□□□□□ -1.44
RPA34YJL148W ISU2Q12056 156 aa6.03□□□□□ -1.44
RPA34YJL148W SDH2P21801 266 aa6.01□□□□□ -1.45
RPA34YJL148W YPL062WQ02781 134 aa5.99□□□□□ -1.45
RPA34YJL148W SAS4Q04003 481 aa5.99□□□□□ -1.45
RPA34YJL148W KEX1P09620 729 aa5.97□□□□□ -1.45
RPA34YJL148W CDC73Q06697 393 aa5.95□□□□□ -1.46
RPA34YJL148W YEL077CQ3E7X8 1277 aa5.95□□□□□ -1.46
RPA34YJL148W PDR1P12383 1068 aa5.94□□□□□ -1.46
RPA34YJL148W MRF1P30775 413 aaPredicted RBP5.88□□□□□ -1.47
RPA34YJL148W YLR326WQ06170 240 aaKnown RBP5.87□□□□□ -1.47
RPA34YJL148W BRE2P43132 505 aa5.86□□□□□ -1.47
RPA34YJL148W UBP14P38237 781 aaKnown RBP5.84□□□□□ -1.47
RPA34YJL148W RPP1BP10622 106 aaKnown RBP5.82□□□□□ -1.48
RPA34YJL148W PCS60P38137 543 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
RPA34YJL148W BUD20Q08004 166 aaPredicted RBP5.82□□□□□ -1.48
RPA34YJL148W PRT1P06103 763 aaKnown RBP5.8□□□□□ -1.48
RPA34YJL148W RAD54P32863 898 aa5.8□□□□□ -1.48
RPA34YJL148W VHR2P40041 505 aa5.8□□□□□ -1.48
RPA34YJL148W GCR2Q01722 534 aa5.8□□□□□ -1.48
RPA34YJL148W AIR1P40507 360 aaKnown RBP5.79□□□□□ -1.48
RPA34YJL148W GAR1P28007 205 aaKnown RBP5.78□□□□□ -1.48
RPA34YJL148W ERG12P07277 443 aa5.77□□□□□ -1.49
RPA34YJL148W CST6P40535 587 aa5.77□□□□□ -1.49
RPA34YJL148W STR2P47164 639 aa5.77□□□□□ -1.49
RPA34YJL148W GBP2P25555 427 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49 RIP-Chip
RPA34YJL148W CLA4P48562 842 aa5.76□□□□□ -1.49
RPA34YJL148W YRR1Q12172 810 aa5.75□□□□□ -1.49
RPA34YJL148W ISM1P48526 1002 aa5.74□□□□□ -1.49
RPA34YJL148W LAM6Q08001 693 aa5.73□□□□□ -1.49
RPA34YJL148W GAP1P19145 602 aaPredicted RBP5.72□□□□□ -1.49
RPA34YJL148W SET1P38827 1080 aaKnown RBP5.72□□□□□ -1.49
RPA34YJL148W PEX21P50091 288 aa5.72□□□□□ -1.49
RPA34YJL148W NUD1P32336 851 aa5.7□□□□□ -1.5
RPA34YJL148W TFB4Q12004 338 aa5.7□□□□□ -1.5
RPA34YJL148W CDC4P07834 779 aa5.69□□□□□ -1.5
RPA34YJL148W YDR090CQ03193 310 aa5.69□□□□□ -1.5
RPA34YJL148W MET22P32179 357 aa5.68□□□□□ -1.5
RPA34YJL148W CSC1Q06538 782 aa5.68□□□□□ -1.5
RPA34YJL148W ENV9Q08651 330 aa5.68□□□□□ -1.5
RPA34YJL148W TY1A-DR4O74302 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-HP0C2I4 478 aaKnown RBP5.67□□□□□ -1.5
RPA34YJL148W TY1A-AP0CX57 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-PR1P0CX58 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-ORP0CX59 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-PR2P0CX60 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-DR5P0CX65 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-ER2P0CX66 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-GR3P0CX67 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-LR1P0CX68 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-MR2P0CX69 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-JR2P47099 440 aa5.67□□□□□ -1.5
RPA34YJL148W TY1A-DR1Q03856 440 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms