RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C VTH1P40438 1549 aa11.87□□□□□ -0.51
SSL2YIL143C VTH2P40890 1549 aa11.87□□□□□ -0.51
SSL2YIL143C VPS15P22219 1454 aa11.84□□□□□ -0.51
SSL2YIL143C SPT7P35177 1332 aa11.83□□□□□ -0.52
SSL2YIL143C YBT1P32386 1661 aa11.82□□□□□ -0.52
SSL2YIL143C PDR10P51533 1564 aa11.81□□□□□ -0.52
SSL2YIL143C SNT2P53127 1403 aa11.78□□□□□ -0.52
SSL2YIL143C DNF1P32660 1571 aa11.78□□□□□ -0.52
SSL2YIL143C TY1B-JR2P47100 1755 aaKnown RBP11.76□□□□□ -0.53
SSL2YIL143C TY1B-ER2Q03619 1755 aa11.76□□□□□ -0.53
SSL2YIL143C TY1B-MR1Q04214 1755 aa11.76□□□□□ -0.53
SSL2YIL143C TY1B-MR2Q04670 1755 aaKnown RBP11.76□□□□□ -0.53
SSL2YIL143C TY1B-LR1Q12088 1755 aaKnown RBP11.76□□□□□ -0.53
SSL2YIL143C TY1B-NL1Q12112 1755 aa11.76□□□□□ -0.53
SSL2YIL143C TY1B-GR1Q12141 1755 aa11.76□□□□□ -0.53
SSL2YIL143C TY1B-BLQ12490 1755 aa11.76□□□□□ -0.53
SSL2YIL143C ESC1Q03661 1658 aaKnown RBP11.76□□□□□ -0.53
SSL2YIL143C CDC25P04821 1589 aa11.74□□□□□ -0.53
SSL2YIL143C SEC3P33332 1336 aaKnown RBP11.73□□□□□ -0.53
SSL2YIL143C IRC20Q06554 1556 aa11.67□□□□□ -0.54
SSL2YIL143C GEA2P39993 1459 aaKnown RBP11.65□□□□□ -0.54
SSL2YIL143C CAT8P39113 1433 aa11.65□□□□□ -0.54
SSL2YIL143C LEU3P08638 886 aa11.64□□□□□ -0.55
SSL2YIL143C NUP159P40477 1460 aa11.64□□□□□ -0.55
SSL2YIL143C GDB1Q06625 1536 aa11.63□□□□□ -0.55
SSL2YIL143C NTE1Q04958 1679 aa11.62□□□□□ -0.55
SSL2YIL143C SRB8P25648 1427 aa11.61□□□□□ -0.55
SSL2YIL143C GCN2P15442 1659 aa11.6□□□□□ -0.55
SSL2YIL143C RPO21P04050 1733 aaKnown RBP11.58□□□□□ -0.55
SSL2YIL143C ARO1P08566 1588 aaKnown RBP11.58□□□□□ -0.55
SSL2YIL143C PRS1P32895 427 aaKnown RBP11.58□□□□□ -0.56
SSL2YIL143C CKB1P43639 278 aa11.57□□□□□ -0.56
SSL2YIL143C NOP7P53261 605 aaKnown RBP11.55□□□□□ -0.56
SSL2YIL143C RPA190P10964 1664 aaKnown RBP11.54□□□□□ -0.56
SSL2YIL143C ORC1P54784 914 aaPredicted RBP11.53□□□□□ -0.56
SSL2YIL143C PSD2P53037 1138 aaKnown RBP11.53□□□□□ -0.56
SSL2YIL143C URN1Q06525 465 aaKnown RBP11.49□□□□□ -0.57
SSL2YIL143C BUD3P25558 1636 aa11.49□□□□□ -0.57
SSL2YIL143C BUD21Q08492 214 aaPredicted RBP11.47□□□□□ -0.57
SSL2YIL143C MHP1P43638 1398 aa11.46□□□□□ -0.57
SSL2YIL143C IQG1Q12280 1495 aa11.43□□□□□ -0.58
SSL2YIL143C YLR419WQ06698 1435 aaKnown RBP11.43□□□□□ -0.58
SSL2YIL143C PDR5P33302 1511 aaKnown RBP11.42□□□□□ -0.58
SSL2YIL143C SPO14P36126 1683 aa11.42□□□□□ -0.58
SSL2YIL143C NUP157P40064 1391 aaKnown RBP11.4□□□□□ -0.58
SSL2YIL143C PDR12Q02785 1511 aa11.39□□□□□ -0.59
SSL2YIL143C PAF1P38351 445 aa11.37□□□□□ -0.59
SSL2YIL143C MET10P39692 1035 aa11.36□□□□□ -0.59
SSL2YIL143C YSP2Q06681 1438 aa11.36□□□□□ -0.59
SSL2YIL143C MMS1Q06211 1407 aa11.35□□□□□ -0.59
SSL2YIL143C YOR093CQ12275 1648 aa11.34□□□□□ -0.59
SSL2YIL143C CFT1Q06632 1357 aaKnown RBP11.33□□□□□ -0.6
SSL2YIL143C YRF1-1P0CX20 1796 aa11.3□□□□□ -0.6
SSL2YIL143C YRF1-5P0CX21 1796 aa11.3□□□□□ -0.6
SSL2YIL143C YRF1-8P0CX22 1796 aa11.3□□□□□ -0.6
SSL2YIL143C PDS5Q04264 1277 aa11.3□□□□□ -0.6
SSL2YIL143C LTE1P07866 1435 aa11.29□□□□□ -0.6
SSL2YIL143C TY3B-IQ7LHG5 1498 aaKnown RBP11.29□□□□□ -0.6
SSL2YIL143C NST1P53935 1240 aa11.29□□□□□ -0.6
SSL2YIL143C FUN12P39730 1002 aaKnown RBP11.28□□□□□ -0.6
SSL2YIL143C TAF5P38129 798 aa11.25□□□□□ -0.61
SSL2YIL143C CHC1P22137 1653 aaKnown RBP11.23□□□□□ -0.61
SSL2YIL143C MTC1P47018 478 aaKnown RBP11.23□□□□□ -0.61
SSL2YIL143C LEO1P38439 464 aa11.22□□□□□ -0.61
SSL2YIL143C DMA1P38823 416 aa11.22□□□□□ -0.61
SSL2YIL143C KIP3P53086 805 aaKnown RBP11.2□□□□□ -0.62
SSL2YIL143C BNR1P40450 1375 aa11.2□□□□□ -0.62
SSL2YIL143C RAV1P47104 1357 aa11.2□□□□□ -0.62
SSL2YIL143C PDR11P40550 1411 aa11.19□□□□□ -0.62
SSL2YIL143C RTC1Q08281 1341 aa11.18□□□□□ -0.62
SSL2YIL143C DOP1Q03921 1698 aa11.15□□□□□ -0.63
SSL2YIL143C DRS2P39524 1355 aa11.14□□□□□ -0.63
SSL2YIL143C SEC7P11075 2009 aaKnown RBP11.14□□□□□ -0.63
SSL2YIL143C VMR1P38735 1592 aa11.13□□□□□ -0.63
SSL2YIL143C RPC31P17890 251 aa11.12□□□□□ -0.63
SSL2YIL143C ESL2P36168 1195 aa11.11□□□□□ -0.63
SSL2YIL143C YPR148CQ06523 435 aa11.1□□□□□ -0.63
SSL2YIL143C NUP192P47054 1683 aa11.09□□□□□ -0.63
SSL2YIL143C RVB2Q12464 471 aaKnown RBP11.07□□□□□ -0.64
SSL2YIL143C CDC45Q08032 650 aa11.07□□□□□ -0.64
SSL2YIL143C IME2P32581 645 aa11.06□□□□□ -0.64
SSL2YIL143C VPS27P40343 622 aaKnown RBP11.06□□□□□ -0.64
SSL2YIL143C YFR016CP43597 1233 aaKnown RBP11.06□□□□□ -0.64
SSL2YIL143C IOC4Q04213 475 aa11.06□□□□□ -0.64
SSL2YIL143C IML1P47170 1584 aa11.06□□□□□ -0.64
SSL2YIL143C RTG3P38165 486 aa11.03□□□□□ -0.64
SSL2YIL143C MET5P47169 1442 aa11.03□□□□□ -0.64
SSL2YIL143C RPP0P05317 312 aaKnown RBP11.03□□□□□ -0.64
SSL2YIL143C SPE2P21182 396 aa11.03□□□□□ -0.64
SSL2YIL143C NUP188P52593 1655 aaKnown RBP11.03□□□□□ -0.64
SSL2YIL143C FPR3P38911 411 aaKnown RBP11.02□□□□□ -0.65
SSL2YIL143C MLP1Q02455 1875 aaKnown RBP11.02□□□□□ -0.65
SSL2YIL143C OPY1P38271 328 aa11.01□□□□□ -0.65
SSL2YIL143C YDL144CQ07589 356 aa11.01□□□□□ -0.65
SSL2YIL143C DNF2Q12675 1612 aa11□□□□□ -0.65
SSL2YIL143C TRK1P12685 1235 aa10.97□□□□□ -0.65
SSL2YIL143C CLC1P17891 233 aa10.95□□□□□ -0.66
SSL2YIL143C SUI2P20459 304 aaKnown RBP10.95□□□□□ -0.66
SSL2YIL143C SCT1P32784 759 aa10.95□□□□□ -0.66
SSL2YIL143C YAP3P38749 330 aa10.95□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms