RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W RGA2Q06407 1009 aa6.69□□□□□ -1.34
APQ12YIL040W DCW1P36091 449 aa6.68□□□□□ -1.34
APQ12YIL040W PRE3P38624 215 aa6.67□□□□□ -1.34
APQ12YIL040W RCR1P38212 213 aa6.65□□□□□ -1.34
APQ12YIL040W YEL023CP39992 682 aa6.64□□□□□ -1.35
APQ12YIL040W PTC4P38089 393 aa6.63□□□□□ -1.35
APQ12YIL040W VRP1P37370 817 aa6.57□□□□□ -1.36
APQ12YIL040W ELP4Q02884 456 aaKnown RBP6.55□□□□□ -1.36
APQ12YIL040W XDJ1P39102 459 aa6.54□□□□□ -1.36
APQ12YIL040W PML39Q03760 334 aa6.53□□□□□ -1.36
APQ12YIL040W GRE2Q12068 342 aaKnown RBP6.52□□□□□ -1.37
APQ12YIL040W DPS1P04802 557 aaKnown RBP6.48□□□□□ -1.37
APQ12YIL040W YDR344CQ05510 147 aa6.48□□□□□ -1.37
APQ12YIL040W MIF2P35201 549 aa6.46□□□□□ -1.38
APQ12YIL040W ATH1P48016 1211 aa6.46□□□□□ -1.38
APQ12YIL040W PEX29Q03370 554 aa6.42□□□□□ -1.38
APQ12YIL040W GUT1P32190 709 aa6.41□□□□□ -1.38
APQ12YIL040W ARH1P48360 493 aa6.41□□□□□ -1.38
APQ12YIL040W MID1P41821 548 aa6.4□□□□□ -1.38
APQ12YIL040W PTC3P34221 468 aaKnown RBP6.38□□□□□ -1.39
APQ12YIL040W SPT23P35210 1082 aa6.37□□□□□ -1.39
APQ12YIL040W MAK11P20484 414 aaKnown RBP6.36□□□□□ -1.39
APQ12YIL040W EDS1P38073 919 aa6.34□□□□□ -1.39
APQ12YIL040W HAP5Q02516 242 aa6.32□□□□□ -1.4
APQ12YIL040W AI4P03878 556 aa6.29□□□□□ -1.4
APQ12YIL040W MPH3P0CE00 602 aa6.29□□□□□ -1.4
APQ12YIL040W RAM2P29703 316 aa6.29□□□□□ -1.4
APQ12YIL040W PTC2P39966 464 aaKnown RBP6.29□□□□□ -1.4
APQ12YIL040W NST1P53935 1240 aa6.29□□□□□ -1.4
APQ12YIL040W COQ8P27697 501 aa6.28□□□□□ -1.4
APQ12YIL040W SOL3P38858 249 aa6.27□□□□□ -1.41
APQ12YIL040W BNI4P53858 892 aa6.26□□□□□ -1.41
APQ12YIL040W SRC1Q03707 834 aa6.24□□□□□ -1.41
APQ12YIL040W RGA1P39083 1007 aa6.23□□□□□ -1.41
APQ12YIL040W YML082WQ04533 649 aaKnown RBP6.23□□□□□ -1.41
APQ12YIL040W ILV3P39522 585 aaKnown RBP6.21□□□□□ -1.42
APQ12YIL040W MPC54Q08550 464 aa6.21□□□□□ -1.42
APQ12YIL040W NMA111P53920 997 aa6.19□□□□□ -1.42
APQ12YIL040W YGR273CP53329 174 aa6.17□□□□□ -1.42
APQ12YIL040W DPL1Q05567 589 aa6.14□□□□□ -1.43
APQ12YIL040W RAS1P01119 309 aa6.13□□□□□ -1.43
APQ12YIL040W SLI15P38283 698 aa6.13□□□□□ -1.43
APQ12YIL040W GYP1Q08484 637 aa6.1□□□□□ -1.43
APQ12YIL040W NOP53Q12080 455 aaKnown RBP6.1□□□□□ -1.43
APQ12YIL040W ISU2Q12056 156 aa6.06□□□□□ -1.44
APQ12YIL040W YPR015CQ12531 247 aa6.06□□□□□ -1.44
APQ12YIL040W TRK1P12685 1235 aa6.05□□□□□ -1.44
APQ12YIL040W AMS1P22855 1083 aa6.04□□□□□ -1.44
APQ12YIL040W KEX1P09620 729 aa6.02□□□□□ -1.45
APQ12YIL040W RAM1P22007 431 aa6.02□□□□□ -1.45
APQ12YIL040W CDC73Q06697 393 aa6□□□□□ -1.45
APQ12YIL040W SAS4Q04003 481 aa5.98□□□□□ -1.45
APQ12YIL040W PDR1P12383 1068 aa5.97□□□□□ -1.45
APQ12YIL040W YEL077CQ3E7X8 1277 aa5.96□□□□□ -1.46
APQ12YIL040W RPP1BP10622 106 aaKnown RBP5.94□□□□□ -1.46
APQ12YIL040W MRF1P30775 413 aaPredicted RBP5.92□□□□□ -1.46
APQ12YIL040W VHR2P40041 505 aa5.92□□□□□ -1.46
APQ12YIL040W SDH2P21801 266 aa5.91□□□□□ -1.46
APQ12YIL040W YLR326WQ06170 240 aaKnown RBP5.91□□□□□ -1.46
APQ12YIL040W RAD54P32863 898 aa5.89□□□□□ -1.47
APQ12YIL040W PCS60P38137 543 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
APQ12YIL040W UBP14P38237 781 aaKnown RBP5.87□□□□□ -1.47
APQ12YIL040W SET1P38827 1080 aaKnown RBP5.86□□□□□ -1.47
APQ12YIL040W PEX21P50091 288 aa5.86□□□□□ -1.47
APQ12YIL040W YPL062WQ02781 134 aa5.86□□□□□ -1.47
APQ12YIL040W GBP2P25555 427 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
APQ12YIL040W PRT1P06103 763 aaKnown RBP5.84□□□□□ -1.47
APQ12YIL040W ERG12P07277 443 aa5.84□□□□□ -1.47
APQ12YIL040W YRR1Q12172 810 aa5.84□□□□□ -1.47
APQ12YIL040W GAR1P28007 205 aaKnown RBP5.83□□□□□ -1.48
APQ12YIL040W KIC1P38692 1080 aa5.82□□□□□ -1.48
APQ12YIL040W BRE2P43132 505 aa5.82□□□□□ -1.48
APQ12YIL040W GCR2Q01722 534 aa5.82□□□□□ -1.48
APQ12YIL040W BUD20Q08004 166 aaPredicted RBP5.82□□□□□ -1.48
APQ12YIL040W NPL4P33755 580 aa5.78□□□□□ -1.48
APQ12YIL040W AIR1P40507 360 aaKnown RBP5.78□□□□□ -1.48
APQ12YIL040W STR2P47164 639 aa5.77□□□□□ -1.49
APQ12YIL040W ISM1P48526 1002 aa5.77□□□□□ -1.49
APQ12YIL040W NUD1P32336 851 aa5.76□□□□□ -1.49
APQ12YIL040W TUM1Q08686 304 aaKnown RBP5.76□□□□□ -1.49
APQ12YIL040W SPT16P32558 1035 aaKnown RBP5.75□□□□□ -1.49
APQ12YIL040W IFH1P39520 1085 aa5.74□□□□□ -1.49
APQ12YIL040W CST6P40535 587 aa5.74□□□□□ -1.49
APQ12YIL040W CLA4P48562 842 aa5.74□□□□□ -1.49
APQ12YIL040W TFB4Q12004 338 aa5.74□□□□□ -1.49
APQ12YIL040W GCD11P32481 527 aaKnown RBP5.73□□□□□ -1.49
APQ12YIL040W FRK1Q03002 865 aaPredicted RBP5.73□□□□□ -1.49
APQ12YIL040W CSC1Q06538 782 aa5.73□□□□□ -1.49
APQ12YIL040W YDR090CQ03193 310 aa5.72□□□□□ -1.49
APQ12YIL040W LAM6Q08001 693 aa5.69□□□□□ -1.5
APQ12YIL040W GAP1P19145 602 aaPredicted RBP5.68□□□□□ -1.5
APQ12YIL040W PAT1P25644 796 aaKnown RBP5.67□□□□□ -1.5
APQ12YIL040W CDC4P07834 779 aa5.66□□□□□ -1.5
APQ12YIL040W RRN7P40992 514 aa5.66□□□□□ -1.5
APQ12YIL040W TY1A-DR4O74302 440 aa5.65□□□□□ -1.5
APQ12YIL040W TY1A-HP0C2I4 478 aaKnown RBP5.65□□□□□ -1.5
APQ12YIL040W TY1A-AP0CX57 440 aa5.65□□□□□ -1.5
APQ12YIL040W TY1A-PR1P0CX58 440 aa5.65□□□□□ -1.5
APQ12YIL040W TY1A-ORP0CX59 440 aa5.65□□□□□ -1.5
APQ12YIL040W TY1A-PR2P0CX60 440 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms