RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeastyeast

Gene RPB3, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB3YIL021W HTA2P04912 132 aa6.83□□□□□ -1.32
RPB3YIL021W GRE2Q12068 342 aaKnown RBP6.83□□□□□ -1.32
RPB3YIL021W JIP4Q03361 876 aa6.81□□□□□ -1.32
RPB3YIL021W BMT6Q12291 365 aa6.81□□□□□ -1.32
RPB3YIL021W YEL023CP39992 682 aa6.8□□□□□ -1.32
RPB3YIL021W PTC4P38089 393 aa6.79□□□□□ -1.32
RPB3YIL021W NST1P53935 1240 aa6.79□□□□□ -1.32
RPB3YIL021W GUT1P32190 709 aa6.78□□□□□ -1.32
RPB3YIL021W SOL3P38858 249 aa6.77□□□□□ -1.33
RPB3YIL021W NOP53Q12080 455 aaKnown RBP6.77□□□□□ -1.33
RPB3YIL021W ATH1P48016 1211 aa6.76□□□□□ -1.33
RPB3YIL021W TFG1P41895 735 aaPredicted RBP6.71□□□□□ -1.34
RPB3YIL021W YDL129WQ07555 291 aa6.71□□□□□ -1.34
RPB3YIL021W SAP30P38429 201 aa6.69□□□□□ -1.34
RPB3YIL021W SET1P38827 1080 aaKnown RBP6.68□□□□□ -1.34
RPB3YIL021W ILV3P39522 585 aaKnown RBP6.68□□□□□ -1.34
RPB3YIL021W MPH3P0CE00 602 aa6.66□□□□□ -1.34
RPB3YIL021W YGR273CP53329 174 aa6.66□□□□□ -1.34
RPB3YIL021W PML39Q03760 334 aa6.66□□□□□ -1.34
RPB3YIL021W AI4P03878 556 aa6.65□□□□□ -1.34
RPB3YIL021W YDR344CQ05510 147 aa6.65□□□□□ -1.34
RPB3YIL021W MID1P41821 548 aa6.62□□□□□ -1.35
RPB3YIL021W PRE3P38624 215 aa6.6□□□□□ -1.35
RPB3YIL021W CHL1P22516 861 aaPredicted RBP6.59□□□□□ -1.35
RPB3YIL021W RQC2Q12532 1038 aaKnown RBP6.58□□□□□ -1.36
RPB3YIL021W ARH1P48360 493 aa6.55□□□□□ -1.36
RPB3YIL021W KEX1P09620 729 aa6.54□□□□□ -1.36
RPB3YIL021W UBP14P38237 781 aaKnown RBP6.54□□□□□ -1.36
RPB3YIL021W SLI15P38283 698 aa6.53□□□□□ -1.36
RPB3YIL021W YLR326WQ06170 240 aaKnown RBP6.52□□□□□ -1.37
RPB3YIL021W YPR148CQ06523 435 aa6.52□□□□□ -1.37
RPB3YIL021W ELP4Q02884 456 aaKnown RBP6.51□□□□□ -1.37
RPB3YIL021W PEX29Q03370 554 aa6.51□□□□□ -1.37
RPB3YIL021W MPC54Q08550 464 aa6.51□□□□□ -1.37
RPB3YIL021W SGS1P35187 1447 aa6.5□□□□□ -1.37
RPB3YIL021W BCK2P33306 851 aa6.49□□□□□ -1.37
RPB3YIL021W VHR2P40041 505 aa6.49□□□□□ -1.37
RPB3YIL021W IFH1P39520 1085 aa6.48□□□□□ -1.37
RPB3YIL021W PCS60P38137 543 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RPB3YIL021W HAP5Q02516 242 aa6.46□□□□□ -1.38
RPB3YIL021W YDR090CQ03193 310 aa6.46□□□□□ -1.38
RPB3YIL021W SPT23P35210 1082 aa6.45□□□□□ -1.38
RPB3YIL021W NMA111P53920 997 aa6.45□□□□□ -1.38
RPB3YIL021W DPL1Q05567 589 aa6.44□□□□□ -1.38
RPB3YIL021W VRP1P37370 817 aa6.43□□□□□ -1.38
RPB3YIL021W BNI4P53858 892 aa6.43□□□□□ -1.38
RPB3YIL021W CDC73Q06697 393 aa6.43□□□□□ -1.38
RPB3YIL021W RAD54P32863 898 aa6.42□□□□□ -1.38
RPB3YIL021W VPS70P47161 811 aa6.41□□□□□ -1.38
RPB3YIL021W REF2P42073 533 aaPredicted RBP6.4□□□□□ -1.38
RPB3YIL021W DMA1P38823 416 aa6.39□□□□□ -1.39
RPB3YIL021W YML082WQ04533 649 aaKnown RBP6.39□□□□□ -1.39
RPB3YIL021W XDJ1P39102 459 aa6.38□□□□□ -1.39
RPB3YIL021W ISU2Q12056 156 aa6.38□□□□□ -1.39
RPB3YIL021W INO80P53115 1489 aa6.37□□□□□ -1.39
RPB3YIL021W RAM1P22007 431 aa6.36□□□□□ -1.39
RPB3YIL021W PTC2P39966 464 aaKnown RBP6.35□□□□□ -1.39
RPB3YIL021W YPR015CQ12531 247 aa6.35□□□□□ -1.39
RPB3YIL021W GAP1P19145 602 aaPredicted RBP6.34□□□□□ -1.39
RPB3YIL021W SPA2P23201 1466 aaKnown RBP6.34□□□□□ -1.4
RPB3YIL021W SAS10Q12136 610 aaPredicted RBP6.33□□□□□ -1.4
RPB3YIL021W COX6P00427 148 aa6.32□□□□□ -1.4
RPB3YIL021W PDR1P12383 1068 aa6.32□□□□□ -1.4
RPB3YIL021W KIC1P38692 1080 aa6.31□□□□□ -1.4
RPB3YIL021W ORC6P38826 435 aa6.3□□□□□ -1.4
RPB3YIL021W MAK21Q12176 1025 aaKnown RBP6.29□□□□□ -1.4
RPB3YIL021W CKB1P43639 278 aa6.28□□□□□ -1.4
RPB3YIL021W RPP1BP10622 106 aaKnown RBP6.27□□□□□ -1.41
RPB3YIL021W SSN2P38931 1420 aa6.26□□□□□ -1.41
RPB3YIL021W CSC1Q06538 782 aa6.26□□□□□ -1.41
RPB3YIL021W PBS2P08018 668 aa6.24□□□□□ -1.41
RPB3YIL021W TFB4Q12004 338 aa6.24□□□□□ -1.41
RPB3YIL021W YRR1Q12172 810 aa6.24□□□□□ -1.41
RPB3YIL021W TCB3Q03640 1545 aaKnown RBP6.24□□□□□ -1.41
RPB3YIL021W MVP1P40959 511 aaKnown RBP6.22□□□□□ -1.41
RPB3YIL021W DPS1P04802 557 aaKnown RBP6.21□□□□□ -1.42
RPB3YIL021W PEX21P50091 288 aa6.21□□□□□ -1.42
RPB3YIL021W TUM1Q08686 304 aaKnown RBP6.21□□□□□ -1.42
RPB3YIL021W RGR1P19263 1082 aa6.2□□□□□ -1.42
RPB3YIL021W DSF2P38213 736 aa6.2□□□□□ -1.42
RPB3YIL021W STR2P47164 639 aa6.2□□□□□ -1.42
RPB3YIL021W BUD20Q08004 166 aaPredicted RBP6.2□□□□□ -1.42
RPB3YIL021W MON2P48563 1636 aaPredicted RBP6.19□□□□□ -1.42
RPB3YIL021W SDH2P21801 266 aa6.19□□□□□ -1.42
RPB3YIL021W ISM1P48526 1002 aa6.18□□□□□ -1.42
RPB3YIL021W NUD1P32336 851 aa6.17□□□□□ -1.42
RPB3YIL021W GYP1Q08484 637 aa6.17□□□□□ -1.42
RPB3YIL021W YPR109WQ06104 294 aa6.16□□□□□ -1.42
RPB3YIL021W RAS1P01119 309 aa6.15□□□□□ -1.42
RPB3YIL021W SAS4Q04003 481 aa6.15□□□□□ -1.42
RPB3YIL021W MAM3Q12296 706 aa6.15□□□□□ -1.42
RPB3YIL021W TY1B-DR4Q07793 1604 aa6.14□□□□□ -1.43
RPB3YIL021W TY1A-DR4O74302 440 aa6.13□□□□□ -1.43
RPB3YIL021W PRT1P06103 763 aaKnown RBP6.13□□□□□ -1.43
RPB3YIL021W TY1A-HP0C2I4 478 aaKnown RBP6.13□□□□□ -1.43
RPB3YIL021W TY1A-AP0CX57 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-PR1P0CX58 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-ORP0CX59 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-PR2P0CX60 440 aa6.13□□□□□ -1.43
RPB3YIL021W TY1A-DR5P0CX65 440 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms