RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W TAF7Q05021 590 aa16.68■□□□□ 0.26
TRM5YHR070W NTE1Q04958 1679 aa16.67■□□□□ 0.26
TRM5YHR070W PDR15Q04182 1529 aaKnown RBP16.66■□□□□ 0.26
TRM5YHR070W ULS1Q08562 1619 aa16.66■□□□□ 0.26
TRM5YHR070W MET5P47169 1442 aa16.64■□□□□ 0.25
TRM5YHR070W RPO21P04050 1733 aaKnown RBP16.63■□□□□ 0.25
TRM5YHR070W NUP159P40477 1460 aa16.59■□□□□ 0.25
TRM5YHR070W YRF1-1P0CX20 1796 aa16.5■□□□□ 0.23
TRM5YHR070W YRF1-5P0CX21 1796 aa16.5■□□□□ 0.23
TRM5YHR070W YRF1-8P0CX22 1796 aa16.5■□□□□ 0.23
TRM5YHR070W GEA1P47102 1408 aaPredicted RBP16.49■□□□□ 0.23
TRM5YHR070W IFH1P39520 1085 aa16.48■□□□□ 0.23
TRM5YHR070W GEA2P39993 1459 aaKnown RBP16.48■□□□□ 0.23
TRM5YHR070W RTT106P40161 455 aa16.44■□□□□ 0.22
TRM5YHR070W IRC20Q06554 1556 aa16.42■□□□□ 0.22
TRM5YHR070W TY3B-GQ99315 1547 aa16.38■□□□□ 0.21
TRM5YHR070W VPS15P22219 1454 aa16.35■□□□□ 0.21
TRM5YHR070W PDR12Q02785 1511 aa16.34■□□□□ 0.21
TRM5YHR070W MET10P39692 1035 aa16.33■□□□□ 0.2
TRM5YHR070W SPO14P36126 1683 aa16.32■□□□□ 0.2
TRM5YHR070W YBT1P32386 1661 aa16.29■□□□□ 0.2
TRM5YHR070W LTE1P07866 1435 aa16.27■□□□□ 0.2
TRM5YHR070W IKI3Q06706 1349 aaKnown RBP16.27■□□□□ 0.19
TRM5YHR070W GDB1Q06625 1536 aa16.27■□□□□ 0.19
TRM5YHR070W CAT8P39113 1433 aa16.26■□□□□ 0.19
TRM5YHR070W NUP170P38181 1502 aa16.23■□□□□ 0.19
TRM5YHR070W PDR10P51533 1564 aa16.22■□□□□ 0.19
TRM5YHR070W NUP157P40064 1391 aaKnown RBP16.2■□□□□ 0.18
TRM5YHR070W ARO1P08566 1588 aaKnown RBP16.11■□□□□ 0.17
TRM5YHR070W SSM4P40318 1319 aa16.07■□□□□ 0.16
TRM5YHR070W IQG1Q12280 1495 aa16.07■□□□□ 0.16
TRM5YHR070W BNI1P41832 1953 aa16.03■□□□□ 0.16
TRM5YHR070W BUD3P25558 1636 aa16.01■□□□□ 0.15
TRM5YHR070W DRS2P39524 1355 aa16.01■□□□□ 0.15
TRM5YHR070W CKB1P43639 278 aa16■□□□□ 0.15
TRM5YHR070W SRB8P25648 1427 aa15.99■□□□□ 0.15
TRM5YHR070W YSP2Q06681 1438 aa15.99■□□□□ 0.15
TRM5YHR070W ITT1Q04638 464 aa15.97■□□□□ 0.15
TRM5YHR070W DOP1Q03921 1698 aa15.9■□□□□ 0.14
TRM5YHR070W SEC7P11075 2009 aaKnown RBP15.88■□□□□ 0.13
TRM5YHR070W TRM3Q07527 1436 aa15.88■□□□□ 0.13
TRM5YHR070W MMS1Q06211 1407 aa15.83■□□□□ 0.12
TRM5YHR070W BNR1P40450 1375 aa15.82■□□□□ 0.12
TRM5YHR070W CHC1P22137 1653 aaKnown RBP15.8■□□□□ 0.12
TRM5YHR070W BUD21Q08492 214 aaPredicted RBP15.78■□□□□ 0.12
TRM5YHR070W GCN2P15442 1659 aa15.69■□□□□ 0.1
TRM5YHR070W DNF2Q12675 1612 aa15.63■□□□□ 0.09
TRM5YHR070W YOR093CQ12275 1648 aa15.56■□□□□ 0.08
TRM5YHR070W PDR5P33302 1511 aaKnown RBP15.52■□□□□ 0.07
TRM5YHR070W NUP188P52593 1655 aaKnown RBP15.52■□□□□ 0.07
TRM5YHR070W VMR1P38735 1592 aa15.51■□□□□ 0.07
TRM5YHR070W IML1P47170 1584 aa15.42■□□□□ 0.06
TRM5YHR070W PDR11P40550 1411 aa15.41■□□□□ 0.06
TRM5YHR070W URN1Q06525 465 aaKnown RBP15.39■□□□□ 0.05
TRM5YHR070W YAP3P38749 330 aa15.38■□□□□ 0.05
TRM5YHR070W ABP1P15891 592 aaKnown RBP15.38■□□□□ 0.05
TRM5YHR070W PAF1P38351 445 aa15.36■□□□□ 0.05
TRM5YHR070W IPL1P38991 367 aa15.36■□□□□ 0.05
TRM5YHR070W NOP7P53261 605 aaKnown RBP15.35■□□□□ 0.05
TRM5YHR070W TYS1P36421 394 aaKnown RBP15.33■□□□□ 0.04
TRM5YHR070W RAV1P47104 1357 aa15.32■□□□□ 0.04
TRM5YHR070W BFR2Q06631 534 aaKnown RBP15.32■□□□□ 0.04
TRM5YHR070W DNF3Q12674 1656 aa15.31■□□□□ 0.04
TRM5YHR070W RTC1Q08281 1341 aa15.25■□□□□ 0.03
TRM5YHR070W HAP1P0CE41 1502 aa15.24■□□□□ 0.03
TRM5YHR070W NUP192P47054 1683 aa15.17■□□□□ 0.02
TRM5YHR070W MAK10Q02197 733 aa15.09■□□□□ 0.01
TRM5YHR070W POL5P39985 1022 aaKnown RBP15.05■□□□□ -0
TRM5YHR070W ESL2P36168 1195 aa15.04■□□□□ -0
TRM5YHR070W TAF5P38129 798 aa15.04■□□□□ -0
TRM5YHR070W TY3B-IQ7LHG5 1498 aaKnown RBP15.04■□□□□ -0
TRM5YHR070W BCK1Q01389 1478 aa15.01□□□□□ -0.01
TRM5YHR070W MIF2P35201 549 aa15.01□□□□□ -0.01
TRM5YHR070W ALD4P46367 519 aaKnown RBP15□□□□□ -0.01
TRM5YHR070W RAD9P14737 1309 aa15□□□□□ -0.01
TRM5YHR070W ORC1P54784 914 aaPredicted RBP14.94□□□□□ -0.02
TRM5YHR070W CAB1Q04430 367 aa14.93□□□□□ -0.02
TRM5YHR070W KRE5P22023 1365 aa14.93□□□□□ -0.02
TRM5YHR070W USO1P25386 1790 aa14.92□□□□□ -0.02
TRM5YHR070W KIP3P53086 805 aaKnown RBP14.91□□□□□ -0.02
TRM5YHR070W TY1B-NL2Q99337 1749 aaKnown RBP14.89□□□□□ -0.03
TRM5YHR070W CFT1Q06632 1357 aaKnown RBP14.89□□□□□ -0.03
TRM5YHR070W YLR419WQ06698 1435 aaKnown RBP14.89□□□□□ -0.03
TRM5YHR070W MRX12P47084 519 aa14.88□□□□□ -0.03
TRM5YHR070W TAF8Q03750 510 aa14.88□□□□□ -0.03
TRM5YHR070W RIA1P53893 1110 aa14.86□□□□□ -0.03
TRM5YHR070W SPE2P21182 396 aa14.84□□□□□ -0.03
TRM5YHR070W MHP1P43638 1398 aa14.8□□□□□ -0.04
TRM5YHR070W NAP1P25293 417 aaKnown RBP14.79□□□□□ -0.04
TRM5YHR070W YNR029CP53729 429 aaKnown RBP14.76□□□□□ -0.05
TRM5YHR070W YMR196WQ04336 1088 aa14.75□□□□□ -0.05
TRM5YHR070W SCT1P32784 759 aa14.71□□□□□ -0.05
TRM5YHR070W CHZ1P40019 153 aaPredicted RBP14.68□□□□□ -0.06
TRM5YHR070W THI12P42883 340 aa14.68□□□□□ -0.06
TRM5YHR070W THI5P43534 340 aa14.68□□□□□ -0.06
TRM5YHR070W THI11P47183 340 aa14.68□□□□□ -0.06
TRM5YHR070W THI13Q07748 340 aa14.68□□□□□ -0.06
TRM5YHR070W RCM1P53972 490 aa14.66□□□□□ -0.06
TRM5YHR070W PDS5Q04264 1277 aa14.66□□□□□ -0.06
TRM5YHR070W SEC3P33332 1336 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms