RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB2, Length 633 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB2YHR041C YRF1-8P0CX22 1796 aa20.84■□□□□ 0.93
SRB2YHR041C SNQ2P32568 1501 aaKnown RBP20.83■□□□□ 0.92
SRB2YHR041C ULS1Q08562 1619 aa20.76■□□□□ 0.91
SRB2YHR041C MLP2P40457 1679 aa20.76■□□□□ 0.91
SRB2YHR041C NUP159P40477 1460 aa20.74■□□□□ 0.91
SRB2YHR041C SNT2P53127 1403 aa20.7■□□□□ 0.9
SRB2YHR041C PDR15Q04182 1529 aaKnown RBP20.65■□□□□ 0.9
SRB2YHR041C SAS10Q12136 610 aaPredicted RBP20.65■□□□□ 0.9
SRB2YHR041C STH1P32597 1359 aa20.62■□□□□ 0.89
SRB2YHR041C VPS15P22219 1454 aa20.5■□□□□ 0.87
SRB2YHR041C SPO14P36126 1683 aa20.46■□□□□ 0.87
SRB2YHR041C IRC20Q06554 1556 aa20.44■□□□□ 0.86
SRB2YHR041C LTE1P07866 1435 aa20.44■□□□□ 0.86
SRB2YHR041C BNI1P41832 1953 aa20.4■□□□□ 0.86
SRB2YHR041C GEA2P39993 1459 aaKnown RBP20.39■□□□□ 0.85
SRB2YHR041C TY3B-GQ99315 1547 aa20.37■□□□□ 0.85
SRB2YHR041C PDR12Q02785 1511 aa20.32■□□□□ 0.84
SRB2YHR041C GEA1P47102 1408 aaPredicted RBP20.29■□□□□ 0.84
SRB2YHR041C GDB1Q06625 1536 aa20.28■□□□□ 0.84
SRB2YHR041C IFH1P39520 1085 aa20.28■□□□□ 0.84
SRB2YHR041C YBT1P32386 1661 aa20.28■□□□□ 0.84
SRB2YHR041C RTT106P40161 455 aa20.22■□□□□ 0.83
SRB2YHR041C TAF7Q05021 590 aa20.21■□□□□ 0.83
SRB2YHR041C MET10P39692 1035 aa20.19■□□□□ 0.82
SRB2YHR041C PDR10P51533 1564 aa20.16■□□□□ 0.82
SRB2YHR041C ITT1Q04638 464 aa20.14■□□□□ 0.81
SRB2YHR041C NUP157P40064 1391 aaKnown RBP20.13■□□□□ 0.81
SRB2YHR041C NUP170P38181 1502 aa20.12■□□□□ 0.81
SRB2YHR041C DRS2P39524 1355 aa20.04■□□□□ 0.8
SRB2YHR041C BUD3P25558 1636 aa20.02■□□□□ 0.79
SRB2YHR041C DOP1Q03921 1698 aa20.01■□□□□ 0.79
SRB2YHR041C ARO1P08566 1588 aaKnown RBP20.01■□□□□ 0.79
SRB2YHR041C IQG1Q12280 1495 aa20■□□□□ 0.79
SRB2YHR041C CAT8P39113 1433 aa19.98■□□□□ 0.79
SRB2YHR041C MMS1Q06211 1407 aa19.9■□□□□ 0.78
SRB2YHR041C YSP2Q06681 1438 aa19.81■□□□□ 0.76
SRB2YHR041C CHC1P22137 1653 aaKnown RBP19.81■□□□□ 0.76
SRB2YHR041C DNF2Q12675 1612 aa19.8■□□□□ 0.76
SRB2YHR041C SEC7P11075 2009 aaKnown RBP19.76■□□□□ 0.75
SRB2YHR041C TRM3Q07527 1436 aa19.75■□□□□ 0.75
SRB2YHR041C CKB1P43639 278 aa19.73■□□□□ 0.75
SRB2YHR041C IKI3Q06706 1349 aaKnown RBP19.71■□□□□ 0.75
SRB2YHR041C SSM4P40318 1319 aa19.69■□□□□ 0.74
SRB2YHR041C SRB8P25648 1427 aa19.64■□□□□ 0.73
SRB2YHR041C BNR1P40450 1375 aa19.54■□□□□ 0.72
SRB2YHR041C YOR093CQ12275 1648 aa19.51■□□□□ 0.71
SRB2YHR041C ABP1P15891 592 aaKnown RBP19.41■□□□□ 0.7
SRB2YHR041C VMR1P38735 1592 aa19.36■□□□□ 0.69
SRB2YHR041C BUD21Q08492 214 aaPredicted RBP19.32■□□□□ 0.68
SRB2YHR041C NUP188P52593 1655 aaKnown RBP19.29■□□□□ 0.68
SRB2YHR041C DNF3Q12674 1656 aa19.28■□□□□ 0.68
SRB2YHR041C GCN2P15442 1659 aa19.27■□□□□ 0.67
SRB2YHR041C PDR5P33302 1511 aaKnown RBP19.16■□□□□ 0.66
SRB2YHR041C MIF2P35201 549 aa19.13■□□□□ 0.65
SRB2YHR041C PDR11P40550 1411 aa19.12■□□□□ 0.65
SRB2YHR041C IML1P47170 1584 aa19.1■□□□□ 0.65
SRB2YHR041C YAP3P38749 330 aa19.08■□□□□ 0.64
SRB2YHR041C TYS1P36421 394 aaKnown RBP19.04■□□□□ 0.64
SRB2YHR041C IPL1P38991 367 aa18.97■□□□□ 0.63
SRB2YHR041C USO1P25386 1790 aa18.91■□□□□ 0.62
SRB2YHR041C URN1Q06525 465 aaKnown RBP18.86■□□□□ 0.61
SRB2YHR041C NUP192P47054 1683 aa18.84■□□□□ 0.61
SRB2YHR041C HAP1P0CE41 1502 aa18.84■□□□□ 0.61
SRB2YHR041C MAK10Q02197 733 aa18.8■□□□□ 0.6
SRB2YHR041C RAV1P47104 1357 aa18.77■□□□□ 0.6
SRB2YHR041C YFR006WP43590 535 aa18.65■□□□□ 0.58
SRB2YHR041C BFR2Q06631 534 aaKnown RBP18.64■□□□□ 0.57
SRB2YHR041C RTC1Q08281 1341 aa18.64■□□□□ 0.57
SRB2YHR041C PAF1P38351 445 aa18.62■□□□□ 0.57
SRB2YHR041C NOP7P53261 605 aaKnown RBP18.59■□□□□ 0.57
SRB2YHR041C TY1B-NL2Q99337 1749 aaKnown RBP18.56■□□□□ 0.56
SRB2YHR041C BCK1Q01389 1478 aa18.56■□□□□ 0.56
SRB2YHR041C KRE5P22023 1365 aa18.55■□□□□ 0.56
SRB2YHR041C RAD9P14737 1309 aa18.53■□□□□ 0.56
SRB2YHR041C CFT1Q06632 1357 aaKnown RBP18.46■□□□□ 0.55
SRB2YHR041C CAB1Q04430 367 aa18.44■□□□□ 0.54
SRB2YHR041C TAF5P38129 798 aa18.41■□□□□ 0.54
SRB2YHR041C ALD4P46367 519 aaKnown RBP18.4■□□□□ 0.54
SRB2YHR041C RIA1P53893 1110 aa18.39■□□□□ 0.53
SRB2YHR041C THI12P42883 340 aa18.37■□□□□ 0.53
SRB2YHR041C THI5P43534 340 aa18.37■□□□□ 0.53
SRB2YHR041C THI11P47183 340 aa18.37■□□□□ 0.53
SRB2YHR041C THI13Q07748 340 aa18.37■□□□□ 0.53
SRB2YHR041C TY3B-IQ7LHG5 1498 aaKnown RBP18.34■□□□□ 0.53
SRB2YHR041C MRX12P47084 519 aa18.31■□□□□ 0.52
SRB2YHR041C YNR029CP53729 429 aaKnown RBP18.27■□□□□ 0.52
SRB2YHR041C ORC1P54784 914 aaPredicted RBP18.26■□□□□ 0.51
SRB2YHR041C ESL2P36168 1195 aa18.25■□□□□ 0.51
SRB2YHR041C TAF8Q03750 510 aa18.25■□□□□ 0.51
SRB2YHR041C YMR196WQ04336 1088 aa18.25■□□□□ 0.51
SRB2YHR041C YLR419WQ06698 1435 aaKnown RBP18.19■□□□□ 0.5
SRB2YHR041C KIP3P53086 805 aaKnown RBP18.17■□□□□ 0.5
SRB2YHR041C SPE2P21182 396 aa18.11■□□□□ 0.49
SRB2YHR041C RCM1P53972 490 aa18.09■□□□□ 0.49
SRB2YHR041C PPH3P32345 308 aa18.08■□□□□ 0.48
SRB2YHR041C TY4B-HP0C2J7 1802 aa18.06■□□□□ 0.48
SRB2YHR041C TY4B-JP47024 1803 aa18.06■□□□□ 0.48
SRB2YHR041C CPS1P27614 576 aa17.98■□□□□ 0.47
SRB2YHR041C YML133CQ03099 1374 aa17.97■□□□□ 0.47
SRB2YHR041C YLL067CQ07888 1374 aa17.97■□□□□ 0.47
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms