RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W SPP1Q03012 353 aa5.47□□□□□ -1.53
BCD1YHR040W ABP1P15891 592 aaKnown RBP5.45□□□□□ -1.54
BCD1YHR040W EAP1P36041 632 aaKnown RBP5.45□□□□□ -1.54
BCD1YHR040W YJL171CP46992 396 aa5.45□□□□□ -1.54
BCD1YHR040W GUT1P32190 709 aa5.44□□□□□ -1.54
BCD1YHR040W DCW1P36091 449 aa5.44□□□□□ -1.54
BCD1YHR040W TIF11P38912 153 aaKnown RBP5.44□□□□□ -1.54
BCD1YHR040W VPS70P47161 811 aa5.44□□□□□ -1.54
BCD1YHR040W SWR1Q05471 1514 aa5.43□□□□□ -1.54
BCD1YHR040W SAS10Q12136 610 aaPredicted RBP5.43□□□□□ -1.54
BCD1YHR040W HTA1P04911 132 aaKnown RBP5.42□□□□□ -1.54
BCD1YHR040W HTA2P04912 132 aa5.42□□□□□ -1.54
BCD1YHR040W ULI1P43604 169 aa5.42□□□□□ -1.54
BCD1YHR040W FKH1P40466 484 aa5.41□□□□□ -1.54
BCD1YHR040W YPR148CQ06523 435 aa5.41□□□□□ -1.54
BCD1YHR040W TY1B-DR4Q07793 1604 aa5.41□□□□□ -1.54
BCD1YHR040W TRP5P00931 707 aaKnown RBP5.39□□□□□ -1.55
BCD1YHR040W CKB1P43639 278 aa5.38□□□□□ -1.55
BCD1YHR040W SPT6P23615 1451 aaKnown RBP5.37□□□□□ -1.55
BCD1YHR040W YEL023CP39992 682 aa5.36□□□□□ -1.55
BCD1YHR040W HSL1P34244 1518 aa5.35□□□□□ -1.55
BCD1YHR040W IOC2Q12072 812 aa5.35□□□□□ -1.55
BCD1YHR040W LDB19Q12502 818 aa5.35□□□□□ -1.55
BCD1YHR040W SPB4P25808 606 aaPredicted RBP5.34□□□□□ -1.55
BCD1YHR040W REF2P42073 533 aaPredicted RBP5.34□□□□□ -1.55
BCD1YHR040W YGR273CP53329 174 aa5.34□□□□□ -1.55
BCD1YHR040W JIP4Q03361 876 aa5.34□□□□□ -1.55
BCD1YHR040W LEU3P08638 886 aa5.33□□□□□ -1.56
BCD1YHR040W PTC4P38089 393 aa5.33□□□□□ -1.56
BCD1YHR040W RTG1P32607 177 aa5.32□□□□□ -1.56
BCD1YHR040W SOL3P38858 249 aa5.32□□□□□ -1.56
BCD1YHR040W VHR2P40041 505 aa5.32□□□□□ -1.56
BCD1YHR040W YNL035CP53962 389 aaKnown RBP5.32□□□□□ -1.56
BCD1YHR040W PBS2P08018 668 aa5.31□□□□□ -1.56
BCD1YHR040W TFG1P41895 735 aaPredicted RBP5.31□□□□□ -1.56
BCD1YHR040W KIC1P38692 1080 aa5.29□□□□□ -1.56
BCD1YHR040W RGA2Q06407 1009 aa5.29□□□□□ -1.56
BCD1YHR040W AI4P03878 556 aa5.28□□□□□ -1.56
BCD1YHR040W KEX1P09620 729 aa5.28□□□□□ -1.56
BCD1YHR040W MPH3P0CE00 602 aa5.28□□□□□ -1.56
BCD1YHR040W SEC61P32915 480 aa5.28□□□□□ -1.56
BCD1YHR040W UBP14P38237 781 aaKnown RBP5.28□□□□□ -1.56
BCD1YHR040W YLR326WQ06170 240 aaKnown RBP5.28□□□□□ -1.56
BCD1YHR040W NCR1Q12200 1170 aa5.28□□□□□ -1.56
BCD1YHR040W RAD54P32863 898 aa5.27□□□□□ -1.57
BCD1YHR040W DAN4P47179 1161 aa5.27□□□□□ -1.57
BCD1YHR040W NST1P53935 1240 aa5.27□□□□□ -1.57
BCD1YHR040W MAK21Q12176 1025 aaKnown RBP5.27□□□□□ -1.57
BCD1YHR040W BMT6Q12291 365 aa5.27□□□□□ -1.57
BCD1YHR040W HIR3P47171 1648 aa5.26□□□□□ -1.57
BCD1YHR040W XRN1P22147 1528 aaKnown RBP5.25□□□□□ -1.57
BCD1YHR040W COX6P00427 148 aa5.25□□□□□ -1.57
BCD1YHR040W DSF2P38213 736 aa5.24□□□□□ -1.57
BCD1YHR040W PML39Q03760 334 aa5.24□□□□□ -1.57
BCD1YHR040W MAM3Q12296 706 aa5.24□□□□□ -1.57
BCD1YHR040W PCS60P38137 543 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
BCD1YHR040W ILV3P39522 585 aaKnown RBP5.22□□□□□ -1.57
BCD1YHR040W YDR090CQ03193 310 aa5.22□□□□□ -1.57
BCD1YHR040W PEX29Q03370 554 aa5.22□□□□□ -1.57
BCD1YHR040W RPP1BP10622 106 aaKnown RBP5.21□□□□□ -1.58
BCD1YHR040W SLI15P38283 698 aa5.21□□□□□ -1.58
BCD1YHR040W YDL129WQ07555 291 aa5.21□□□□□ -1.58
BCD1YHR040W IES2P40154 320 aa5.2□□□□□ -1.58
BCD1YHR040W MID1P41821 548 aa5.2□□□□□ -1.58
BCD1YHR040W SAP30P38429 201 aa5.19□□□□□ -1.58
BCD1YHR040W REV3P14284 1504 aa5.18□□□□□ -1.58
BCD1YHR040W SIN3P22579 1536 aa5.17□□□□□ -1.58
BCD1YHR040W THO2P53552 1597 aaKnown RBP5.16□□□□□ -1.58
BCD1YHR040W DPL1Q05567 589 aa5.15□□□□□ -1.59
BCD1YHR040W CDC73Q06697 393 aa5.15□□□□□ -1.59
BCD1YHR040W MPC54Q08550 464 aa5.15□□□□□ -1.59
BCD1YHR040W NUP42P49686 430 aaKnown RBP5.14□□□□□ -1.59
BCD1YHR040W PEX21P50091 288 aa5.14□□□□□ -1.59
BCD1YHR040W TAF2P23255 1407 aa5.14□□□□□ -1.59
BCD1YHR040W DIT2P21595 489 aa5.13□□□□□ -1.59
BCD1YHR040W ELP4Q02884 456 aaKnown RBP5.13□□□□□ -1.59
BCD1YHR040W BUD4P47136 1447 aa5.13□□□□□ -1.59
BCD1YHR040W RPN1P38764 993 aaKnown RBP5.12□□□□□ -1.59
BCD1YHR040W YNR021WP53723 404 aaKnown RBP5.12□□□□□ -1.59
BCD1YHR040W NMA111P53920 997 aa5.12□□□□□ -1.59
BCD1YHR040W CSC1Q06538 782 aa5.12□□□□□ -1.59
BCD1YHR040W PSE1P32337 1089 aaKnown RBP5.11□□□□□ -1.59
BCD1YHR040W ORC6P38826 435 aa5.11□□□□□ -1.59
BCD1YHR040W SSK2P53599 1579 aa5.11□□□□□ -1.59
BCD1YHR040W MYO2P19524 1574 aaKnown RBP5.1□□□□□ -1.59
BCD1YHR040W ATF2P53296 535 aa5.1□□□□□ -1.59
BCD1YHR040W HAP5Q02516 242 aa5.1□□□□□ -1.59
BCD1YHR040W ISU2Q12056 156 aa5.1□□□□□ -1.59
BCD1YHR040W GLC3P32775 704 aa5.09□□□□□ -1.59
BCD1YHR040W ARH1P48360 493 aa5.09□□□□□ -1.59
BCD1YHR040W SKI3P17883 1432 aaKnown RBP5.08□□□□□ -1.6
BCD1YHR040W MVP1P40959 511 aaKnown RBP5.08□□□□□ -1.6
BCD1YHR040W DMA2P53924 522 aa5.08□□□□□ -1.6
BCD1YHR040W TFB4Q12004 338 aa5.08□□□□□ -1.6
BCD1YHR040W CHD1P32657 1468 aa5.07□□□□□ -1.6
BCD1YHR040W ECM5Q03214 1411 aa5.07□□□□□ -1.6
BCD1YHR040W RGR1P19263 1082 aa5.07□□□□□ -1.6
BCD1YHR040W PRE3P38624 215 aa5.07□□□□□ -1.6
BCD1YHR040W TUM1Q08686 304 aaKnown RBP5.07□□□□□ -1.6
BCD1YHR040W YTA7P40340 1379 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms