RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W YDL129WQ07555 291 aa8.18□□□□□ -1.1
RTT102YGR275W PTC4P38089 393 aa8.15□□□□□ -1.1
RTT102YGR275W CHL1P22516 861 aaPredicted RBP8.11□□□□□ -1.11
RTT102YGR275W GRE2Q12068 342 aaKnown RBP8.11□□□□□ -1.11
RTT102YGR275W BCK2P33306 851 aa8.1□□□□□ -1.11
RTT102YGR275W MIF2P35201 549 aa8.1□□□□□ -1.11
RTT102YGR275W PRE3P38624 215 aa8.09□□□□□ -1.11
RTT102YGR275W MAK11P20484 414 aaKnown RBP8.04□□□□□ -1.12
RTT102YGR275W ATH1P48016 1211 aa8.04□□□□□ -1.12
RTT102YGR275W RAM2P29703 316 aa8.03□□□□□ -1.12
RTT102YGR275W PML39Q03760 334 aa8.03□□□□□ -1.12
RTT102YGR275W PTC3P34221 468 aaKnown RBP8.01□□□□□ -1.13
RTT102YGR275W EDS1P38073 919 aa8.01□□□□□ -1.13
RTT102YGR275W GUT1P32190 709 aa7.99□□□□□ -1.13
RTT102YGR275W ELP4Q02884 456 aaKnown RBP7.98□□□□□ -1.13
RTT102YGR275W YDR344CQ05510 147 aa7.98□□□□□ -1.13
RTT102YGR275W COQ8P27697 501 aa7.94□□□□□ -1.14
RTT102YGR275W VRP1P37370 817 aa7.93□□□□□ -1.14
RTT102YGR275W MID1P41821 548 aa7.91□□□□□ -1.14
RTT102YGR275W PEX29Q03370 554 aa7.89□□□□□ -1.15
RTT102YGR275W SOL3P38858 249 aa7.87□□□□□ -1.15
RTT102YGR275W XDJ1P39102 459 aa7.87□□□□□ -1.15
RTT102YGR275W NST1P53935 1240 aa7.87□□□□□ -1.15
RTT102YGR275W ARH1P48360 493 aa7.86□□□□□ -1.15
RTT102YGR275W AI4P03878 556 aa7.83□□□□□ -1.16
RTT102YGR275W MPH3P0CE00 602 aa7.83□□□□□ -1.16
RTT102YGR275W ILV3P39522 585 aaKnown RBP7.8□□□□□ -1.16
RTT102YGR275W SPT23P35210 1082 aa7.79□□□□□ -1.16
RTT102YGR275W HAP5Q02516 242 aa7.77□□□□□ -1.17
RTT102YGR275W DPS1P04802 557 aaKnown RBP7.76□□□□□ -1.17
RTT102YGR275W YGR273CP53329 174 aa7.76□□□□□ -1.17
RTT102YGR275W NOP53Q12080 455 aaKnown RBP7.74□□□□□ -1.17
RTT102YGR275W MPC54Q08550 464 aa7.72□□□□□ -1.17
RTT102YGR275W BNI4P53858 892 aa7.71□□□□□ -1.18
RTT102YGR275W PTC2P39966 464 aaKnown RBP7.7□□□□□ -1.18
RTT102YGR275W SLI15P38283 698 aa7.67□□□□□ -1.18
RTT102YGR275W NMA111P53920 997 aa7.66□□□□□ -1.18
RTT102YGR275W YML082WQ04533 649 aaKnown RBP7.64□□□□□ -1.19
RTT102YGR275W DPL1Q05567 589 aa7.63□□□□□ -1.19
RTT102YGR275W KEX1P09620 729 aa7.59□□□□□ -1.19
RTT102YGR275W SET1P38827 1080 aaKnown RBP7.55□□□□□ -1.2
RTT102YGR275W SRC1Q03707 834 aa7.53□□□□□ -1.2
RTT102YGR275W CDC73Q06697 393 aa7.53□□□□□ -1.2
RTT102YGR275W ISU2Q12056 156 aa7.53□□□□□ -1.2
RTT102YGR275W YPR015CQ12531 247 aa7.53□□□□□ -1.2
RTT102YGR275W VHR2P40041 505 aa7.52□□□□□ -1.21
RTT102YGR275W YLR326WQ06170 240 aaKnown RBP7.5□□□□□ -1.21
RTT102YGR275W RAM1P22007 431 aa7.48□□□□□ -1.21
RTT102YGR275W GYP1Q08484 637 aa7.48□□□□□ -1.21
RTT102YGR275W RAS1P01119 309 aa7.47□□□□□ -1.21
RTT102YGR275W UBP14P38237 781 aaKnown RBP7.47□□□□□ -1.21
RTT102YGR275W RAD54P32863 898 aa7.46□□□□□ -1.22
RTT102YGR275W PDR1P12383 1068 aa7.45□□□□□ -1.22
RTT102YGR275W PCS60P38137 543 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
RTT102YGR275W RPP1BP10622 106 aaKnown RBP7.43□□□□□ -1.22
RTT102YGR275W AMS1P22855 1083 aa7.38□□□□□ -1.23
RTT102YGR275W KIC1P38692 1080 aa7.37□□□□□ -1.23
RTT102YGR275W SAS4Q04003 481 aa7.35□□□□□ -1.23
RTT102YGR275W PEX21P50091 288 aa7.34□□□□□ -1.23
RTT102YGR275W IFH1P39520 1085 aa7.33□□□□□ -1.24
RTT102YGR275W TRK1P12685 1235 aa7.32□□□□□ -1.24
RTT102YGR275W SDH2P21801 266 aa7.32□□□□□ -1.24
RTT102YGR275W YDR090CQ03193 310 aa7.32□□□□□ -1.24
RTT102YGR275W YRR1Q12172 810 aa7.32□□□□□ -1.24
RTT102YGR275W YEL077CQ3E7X8 1277 aa7.31□□□□□ -1.24
RTT102YGR275W MRF1P30775 413 aaPredicted RBP7.27□□□□□ -1.25
RTT102YGR275W BUD20Q08004 166 aaPredicted RBP7.27□□□□□ -1.25
RTT102YGR275W PRT1P06103 763 aaKnown RBP7.26□□□□□ -1.25
RTT102YGR275W REF2P42073 533 aaPredicted RBP7.26□□□□□ -1.25
RTT102YGR275W STR2P47164 639 aa7.25□□□□□ -1.25
RTT102YGR275W CSC1Q06538 782 aa7.25□□□□□ -1.25
RTT102YGR275W TUM1Q08686 304 aaKnown RBP7.25□□□□□ -1.25
RTT102YGR275W TFB4Q12004 338 aa7.24□□□□□ -1.25
RTT102YGR275W NUD1P32336 851 aa7.23□□□□□ -1.25
RTT102YGR275W RGA1P39083 1007 aa7.23□□□□□ -1.25
RTT102YGR275W ISM1P48526 1002 aa7.23□□□□□ -1.25
RTT102YGR275W GAP1P19145 602 aaPredicted RBP7.22□□□□□ -1.25
RTT102YGR275W YPR148CQ06523 435 aa7.22□□□□□ -1.25
RTT102YGR275W NPL4P33755 580 aa7.21□□□□□ -1.26
RTT102YGR275W ERG12P07277 443 aa7.2□□□□□ -1.26
RTT102YGR275W ORC6P38826 435 aa7.19□□□□□ -1.26
RTT102YGR275W VPS70P47161 811 aa7.19□□□□□ -1.26
RTT102YGR275W RGA2Q06407 1009 aa7.18□□□□□ -1.26
RTT102YGR275W GCD11P32481 527 aaKnown RBP7.16□□□□□ -1.26
RTT102YGR275W CST6P40535 587 aa7.14□□□□□ -1.27
RTT102YGR275W SPT16P32558 1035 aaKnown RBP7.13□□□□□ -1.27
RTT102YGR275W MAK21Q12176 1025 aaKnown RBP7.13□□□□□ -1.27
RTT102YGR275W TY1A-DR4O74302 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-HP0C2I4 478 aaKnown RBP7.12□□□□□ -1.27
RTT102YGR275W TY1A-AP0CX57 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-PR1P0CX58 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-ORP0CX59 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-PR2P0CX60 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-DR5P0CX65 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-ER2P0CX66 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-GR3P0CX67 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-LR1P0CX68 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-MR2P0CX69 440 aa7.12□□□□□ -1.27
RTT102YGR275W AIR1P40507 360 aaKnown RBP7.12□□□□□ -1.27
RTT102YGR275W TY1A-JR2P47099 440 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 6.3 ms