RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	HEM3	P28789	327 aa		4.55	□□□□□ -1.68
CCM1	YGR150C	GLN1	P32288	370 aa	Known RBP	4.55	□□□□□ -1.68
CCM1	YGR150C	BIM1	P40013	344 aa		4.55	□□□□□ -1.68
CCM1	YGR150C	ATF2	P53296	535 aa		4.55	□□□□□ -1.68
CCM1	YGR150C	SEN54	Q02825	467 aa	Predicted RBP	4.55	□□□□□ -1.68
CCM1	YGR150C	RCR1	P38212	213 aa		4.54	□□□□□ -1.68
CCM1	YGR150C	LAM6	Q08001	693 aa		4.54	□□□□□ -1.68
CCM1	YGR150C	SWE1	P32944	819 aa		4.53	□□□□□ -1.68
CCM1	YGR150C	OCA5	P38738	679 aa		4.53	□□□□□ -1.68
CCM1	YGR150C	SSF1	P38789	453 aa	Predicted RBP	4.53	□□□□□ -1.68
CCM1	YGR150C	ATG32	P40458	529 aa		4.53	□□□□□ -1.68
CCM1	YGR150C	MAK11	P20484	414 aa	Known RBP	4.53	□□□□□ -1.68
CCM1	YGR150C	RPL34A	P87262	121 aa	Predicted RBP	4.53	□□□□□ -1.68
CCM1	YGR150C	YJL007C	P47080	104 aa		4.52	□□□□□ -1.69
CCM1	YGR150C	CDC3	P32457	520 aa	Known RBP	4.52	□□□□□ -1.69
CCM1	YGR150C	REF2	P42073	533 aa	Predicted RBP	4.52	□□□□□ -1.69
CCM1	YGR150C	RTS3	P53289	263 aa		4.51	□□□□□ -1.69
CCM1	YGR150C	CPS1	P27614	576 aa		4.5	□□□□□ -1.69
CCM1	YGR150C	ASF1	P32447	279 aa		4.5	□□□□□ -1.69
CCM1	YGR150C	UBP9	P39967	754 aa		4.5	□□□□□ -1.69
CCM1	YGR150C	SUB1	P54000	292 aa	Known RBP	4.5	□□□□□ -1.69
CCM1	YGR150C	SSA2	P10592	639 aa	Known RBP	4.49	□□□□□ -1.69
CCM1	YGR150C	NOB1	Q08444	459 aa	Known RBP	4.49	□□□□□ -1.69
CCM1	YGR150C	YJR008W	P47085	338 aa		4.49	□□□□□ -1.69
CCM1	YGR150C	TIF1	P10081	395 aa	Known RBP	4.48	□□□□□ -1.69
CCM1	YGR150C	ERG12	P07277	443 aa		4.48	□□□□□ -1.69
CCM1	YGR150C	ITT1	Q04638	464 aa		4.48	□□□□□ -1.69
CCM1	YGR150C	COX6	P00427	148 aa		4.47	□□□□□ -1.69
CCM1	YGR150C	YAF9	P53930	226 aa		4.47	□□□□□ -1.69
CCM1	YGR150C	VPS72	Q03388	795 aa		4.47	□□□□□ -1.69
CCM1	YGR150C	FPR4	Q06205	392 aa	Predicted RBP	4.47	□□□□□ -1.69
CCM1	YGR150C	HO	P09932	586 aa		4.47	□□□□□ -1.69
CCM1	YGR150C	TFC8	Q12308	588 aa		4.47	□□□□□ -1.69
CCM1	YGR150C	MRM1	P25270	412 aa		4.46	□□□□□ -1.7
CCM1	YGR150C	TTI1	P36097	1038 aa		4.46	□□□□□ -1.7
CCM1	YGR150C	RPL34B	P40525	121 aa	Known RBP	4.46	□□□□□ -1.7
CCM1	YGR150C	ALD4	P46367	519 aa	Known RBP	4.46	□□□□□ -1.7
CCM1	YGR150C	BBC1	P47068	1157 aa		4.46	□□□□□ -1.7
CCM1	YGR150C	HAT1	Q12341	374 aa		4.46	□□□□□ -1.7
CCM1	YGR150C	COQ8	P27697	501 aa		4.46	□□□□□ -1.7
CCM1	YGR150C	UBP10	P53874	792 aa	Predicted RBP	4.46	□□□□□ -1.7
CCM1	YGR150C	RTG3	P38165	486 aa		4.45	□□□□□ -1.7
CCM1	YGR150C	NMD2	P38798	1089 aa	Known RBP	4.45	□□□□□ -1.7
CCM1	YGR150C	CSN12	P47130	423 aa		4.45	□□□□□ -1.7
CCM1	YGR150C	OSW7	P43611	510 aa		4.44	□□□□□ -1.7
CCM1	YGR150C	NOP53	Q12080	455 aa	Known RBP	4.44	□□□□□ -1.7
CCM1	YGR150C	KEX1	P09620	729 aa		4.44	□□□□□ -1.7
CCM1	YGR150C	ALD2	P47771	506 aa		4.44	□□□□□ -1.7
CCM1	YGR150C	IPL1	P38991	367 aa		4.43	□□□□□ -1.7
CCM1	YGR150C	CST6	P40535	587 aa		4.43	□□□□□ -1.7
CCM1	YGR150C	YPR204W	Q08995	1032 aa		4.43	□□□□□ -1.7
CCM1	YGR150C	GIN4	Q12263	1142 aa		4.43	□□□□□ -1.7
CCM1	YGR150C	DCD1	P06773	312 aa		4.43	□□□□□ -1.7
CCM1	YGR150C	TPO2	P53283	614 aa		4.43	□□□□□ -1.7
CCM1	YGR150C	NNF1	P47149	201 aa		4.42	□□□□□ -1.7
CCM1	YGR150C	RTG2	P32608	588 aa	Known RBP	4.42	□□□□□ -1.7
CCM1	YGR150C	CDC27	P38042	758 aa		4.42	□□□□□ -1.7
CCM1	YGR150C	MAP2	P38174	421 aa	Known RBP	4.42	□□□□□ -1.7
CCM1	YGR150C	YML083C	Q04526	418 aa		4.42	□□□□□ -1.7
CCM1	YGR150C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
CCM1	YGR150C	PUP1	P25043	261 aa		4.4	□□□□□ -1.7
CCM1	YGR150C	BIO2	P32451	375 aa		4.4	□□□□□ -1.7
CCM1	YGR150C	UBP14	P38237	781 aa	Known RBP	4.4	□□□□□ -1.7
CCM1	YGR150C	STM1	P39015	273 aa	Known RBP	4.4	□□□□□ -1.7
CCM1	YGR150C	MDG1	P53885	366 aa		4.4	□□□□□ -1.7
CCM1	YGR150C	UBX5	Q06682	500 aa		4.4	□□□□□ -1.71
CCM1	YGR150C	BUD21	Q08492	214 aa	Predicted RBP	4.4	□□□□□ -1.71
CCM1	YGR150C	RRP15	Q06511	250 aa	Predicted RBP	4.39	□□□□□ -1.71
CCM1	YGR150C	KTR1	P27810	393 aa	Known RBP	4.39	□□□□□ -1.71
CCM1	YGR150C	SEC20	P28791	383 aa		4.39	□□□□□ -1.71
CCM1	YGR150C	RNH70	P53331	553 aa		4.39	□□□□□ -1.71
CCM1	YGR150C	TOM20	P35180	183 aa		4.38	□□□□□ -1.71
CCM1	YGR150C	YBL036C	P38197	257 aa		4.38	□□□□□ -1.71
CCM1	YGR150C	SVF1	Q05515	481 aa		4.38	□□□□□ -1.71
CCM1	YGR150C	BCH2	P36122	765 aa		4.38	□□□□□ -1.71
CCM1	YGR150C	PDR1	P12383	1068 aa		4.37	□□□□□ -1.71
CCM1	YGR150C	EDS1	P38073	919 aa		4.36	□□□□□ -1.71
CCM1	YGR150C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
CCM1	YGR150C	YOL098C	Q12496	1037 aa		4.36	□□□□□ -1.71
CCM1	YGR150C	ATE1	P16639	503 aa		4.36	□□□□□ -1.71
CCM1	YGR150C	YNL108C	P53929	270 aa		4.36	□□□□□ -1.71
CCM1	YGR150C	MSC6	Q08818	692 aa	Known RBP	4.36	□□□□□ -1.71
CCM1	YGR150C	YBL113C	Q7M4S9	792 aa		4.36	□□□□□ -1.71
CCM1	YGR150C	MIF2	P35201	549 aa		4.35	□□□□□ -1.71
CCM1	YGR150C	TIF4632	P39936	914 aa	Known RBP	4.35	□□□□□ -1.71
CCM1	YGR150C	YDR090C	Q03193	310 aa		4.35	□□□□□ -1.71
CCM1	YGR150C	RRP14	P36080	434 aa	Known RBP	4.35	□□□□□ -1.71
CCM1	YGR150C	VPS29	P38759	282 aa		4.35	□□□□□ -1.71
CCM1	YGR150C	EPS1	P40557	701 aa		4.35	□□□□□ -1.71
CCM1	YGR150C	MAK16	P10962	306 aa	Predicted RBP	4.34	□□□□□ -1.71
CCM1	YGR150C	PSE1	P32337	1089 aa	Known RBP	4.34	□□□□□ -1.71
CCM1	YGR150C	POL32	P47110	350 aa		4.34	□□□□□ -1.71
CCM1	YGR150C	TSR4	P25040	408 aa		4.34	□□□□□ -1.72
CCM1	YGR150C	PPG1	P32838	368 aa		4.34	□□□□□ -1.72
CCM1	YGR150C	SIS2	P36024	562 aa		4.34	□□□□□ -1.72
CCM1	YGR150C	FPR3	P38911	411 aa	Known RBP	4.34	□□□□□ -1.72
CCM1	YGR150C	MAG2	Q06436	670 aa	Known RBP	4.34	□□□□□ -1.72
CCM1	YGR150C	TYW1	Q08960	810 aa	Known RBP	4.34	□□□□□ -1.72
CCM1	YGR150C	SUP45	P12385	437 aa	Known RBP	4.33	□□□□□ -1.72
CCM1	YGR150C	ERP5	P38819	212 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms