RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W HTA2P04912 132 aa7.78□□□□□ -1.16
LSB1YGR136W PTC4P38089 393 aa7.78□□□□□ -1.16
LSB1YGR136W RQC2Q12532 1038 aaKnown RBP7.76□□□□□ -1.17
LSB1YGR136W DCW1P36091 449 aa7.75□□□□□ -1.17
LSB1YGR136W RCR1P38212 213 aa7.75□□□□□ -1.17
LSB1YGR136W YEL023CP39992 682 aa7.74□□□□□ -1.17
LSB1YGR136W XDJ1P39102 459 aa7.68□□□□□ -1.18
LSB1YGR136W INO80P53115 1489 aa7.68□□□□□ -1.18
LSB1YGR136W VRP1P37370 817 aa7.65□□□□□ -1.18
LSB1YGR136W PML39Q03760 334 aa7.6□□□□□ -1.19
LSB1YGR136W ELP4Q02884 456 aaKnown RBP7.59□□□□□ -1.19
LSB1YGR136W YDR344CQ05510 147 aa7.59□□□□□ -1.19
LSB1YGR136W GRE2Q12068 342 aaKnown RBP7.59□□□□□ -1.19
LSB1YGR136W MON2P48563 1636 aaPredicted RBP7.59□□□□□ -1.19
LSB1YGR136W ARH1P48360 493 aa7.53□□□□□ -1.2
LSB1YGR136W DPS1P04802 557 aaKnown RBP7.52□□□□□ -1.21
LSB1YGR136W GUT1P32190 709 aa7.5□□□□□ -1.21
LSB1YGR136W ATH1P48016 1211 aa7.49□□□□□ -1.21
LSB1YGR136W PTC3P34221 468 aaKnown RBP7.46□□□□□ -1.22
LSB1YGR136W MIF2P35201 549 aa7.46□□□□□ -1.22
LSB1YGR136W NST1P53935 1240 aa7.46□□□□□ -1.22
LSB1YGR136W MAK11P20484 414 aaKnown RBP7.45□□□□□ -1.22
LSB1YGR136W SPT23P35210 1082 aa7.45□□□□□ -1.22
LSB1YGR136W MID1P41821 548 aa7.45□□□□□ -1.22
LSB1YGR136W SGS1P35187 1447 aa7.44□□□□□ -1.22
LSB1YGR136W EDS1P38073 919 aa7.43□□□□□ -1.22
LSB1YGR136W SOL3P38858 249 aa7.4□□□□□ -1.22
LSB1YGR136W AI4P03878 556 aa7.39□□□□□ -1.23
LSB1YGR136W MPH3P0CE00 602 aa7.39□□□□□ -1.23
LSB1YGR136W PEX29Q03370 554 aa7.39□□□□□ -1.23
LSB1YGR136W TCB3Q03640 1545 aaKnown RBP7.38□□□□□ -1.23
LSB1YGR136W RAM2P29703 316 aa7.38□□□□□ -1.23
LSB1YGR136W HAP5Q02516 242 aa7.37□□□□□ -1.23
LSB1YGR136W BNI4P53858 892 aa7.35□□□□□ -1.23
LSB1YGR136W SRC1Q03707 834 aa7.35□□□□□ -1.23
LSB1YGR136W YML082WQ04533 649 aaKnown RBP7.35□□□□□ -1.23
LSB1YGR136W RGA2Q06407 1009 aa7.35□□□□□ -1.23
LSB1YGR136W COQ8P27697 501 aa7.33□□□□□ -1.24
LSB1YGR136W SWR1Q05471 1514 aa7.32□□□□□ -1.24
LSB1YGR136W TY1B-DR4Q07793 1604 aa7.3□□□□□ -1.24
LSB1YGR136W ILV3P39522 585 aaKnown RBP7.3□□□□□ -1.24
LSB1YGR136W PTC2P39966 464 aaKnown RBP7.3□□□□□ -1.24
LSB1YGR136W DNA2P38859 1522 aa7.28□□□□□ -1.24
LSB1YGR136W MPC54Q08550 464 aa7.27□□□□□ -1.25
LSB1YGR136W RGA1P39083 1007 aa7.26□□□□□ -1.25
LSB1YGR136W NOP53Q12080 455 aaKnown RBP7.25□□□□□ -1.25
LSB1YGR136W YGR273CP53329 174 aa7.24□□□□□ -1.25
LSB1YGR136W NMA111P53920 997 aa7.23□□□□□ -1.25
LSB1YGR136W KOG1P38873 1557 aa7.19□□□□□ -1.26
LSB1YGR136W DPL1Q05567 589 aa7.18□□□□□ -1.26
LSB1YGR136W RAS1P01119 309 aa7.17□□□□□ -1.26
LSB1YGR136W SLI15P38283 698 aa7.17□□□□□ -1.26
LSB1YGR136W YPR015CQ12531 247 aa7.12□□□□□ -1.27
LSB1YGR136W SPT6P23615 1451 aaKnown RBP7.11□□□□□ -1.27
LSB1YGR136W RAM1P22007 431 aa7.11□□□□□ -1.27
LSB1YGR136W ISU2Q12056 156 aa7.1□□□□□ -1.27
LSB1YGR136W HSL1P34244 1518 aa7.1□□□□□ -1.27
LSB1YGR136W SPA2P23201 1466 aaKnown RBP7.1□□□□□ -1.27
LSB1YGR136W AMS1P22855 1083 aa7.07□□□□□ -1.28
LSB1YGR136W TRK1P12685 1235 aa7.06□□□□□ -1.28
LSB1YGR136W DMA1P38823 416 aa7.06□□□□□ -1.28
LSB1YGR136W GYP1Q08484 637 aa7.06□□□□□ -1.28
LSB1YGR136W KEX1P09620 729 aa7.04□□□□□ -1.28
LSB1YGR136W SAS4Q04003 481 aa7.02□□□□□ -1.29
LSB1YGR136W CDC73Q06697 393 aa7□□□□□ -1.29
LSB1YGR136W SDH2P21801 266 aa6.98□□□□□ -1.29
LSB1YGR136W HIR3P47171 1648 aa6.98□□□□□ -1.29
LSB1YGR136W PDR1P12383 1068 aa6.97□□□□□ -1.29
LSB1YGR136W ECM5Q03214 1411 aa6.94□□□□□ -1.3
LSB1YGR136W YEL077CQ3E7X8 1277 aa6.94□□□□□ -1.3
LSB1YGR136W UBP14P38237 781 aaKnown RBP6.93□□□□□ -1.3
LSB1YGR136W YLR326WQ06170 240 aaKnown RBP6.93□□□□□ -1.3
LSB1YGR136W SSN2P38931 1420 aa6.91□□□□□ -1.3
LSB1YGR136W MRF1P30775 413 aaPredicted RBP6.9□□□□□ -1.3
LSB1YGR136W XRN1P22147 1528 aaKnown RBP6.9□□□□□ -1.31
LSB1YGR136W RPP1BP10622 106 aaKnown RBP6.89□□□□□ -1.31
LSB1YGR136W PCS60P38137 543 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
LSB1YGR136W YPL062WQ02781 134 aa6.89□□□□□ -1.31
LSB1YGR136W BUD4P47136 1447 aa6.87□□□□□ -1.31
LSB1YGR136W VHR2P40041 505 aa6.87□□□□□ -1.31
LSB1YGR136W RAD54P32863 898 aa6.86□□□□□ -1.31
LSB1YGR136W THO2P53552 1597 aaKnown RBP6.84□□□□□ -1.31
LSB1YGR136W SET1P38827 1080 aaKnown RBP6.84□□□□□ -1.31
LSB1YGR136W BUD20Q08004 166 aaPredicted RBP6.84□□□□□ -1.31
LSB1YGR136W PRT1P06103 763 aaKnown RBP6.83□□□□□ -1.32
LSB1YGR136W TAF7Q05021 590 aa6.82□□□□□ -1.32
LSB1YGR136W ERG12P07277 443 aa6.78□□□□□ -1.32
LSB1YGR136W BRE2P43132 505 aa6.78□□□□□ -1.32
LSB1YGR136W YRR1Q12172 810 aa6.78□□□□□ -1.32
LSB1YGR136W LEO1P38439 464 aa6.77□□□□□ -1.33
LSB1YGR136W GCR2Q01722 534 aa6.77□□□□□ -1.33
LSB1YGR136W STR2P47164 639 aa6.76□□□□□ -1.33
LSB1YGR136W PEX21P50091 288 aa6.76□□□□□ -1.33
LSB1YGR136W MDS3P53094 1487 aa6.76□□□□□ -1.33
LSB1YGR136W TAF2P23255 1407 aa6.76□□□□□ -1.33
LSB1YGR136W GAP1P19145 602 aaPredicted RBP6.75□□□□□ -1.33
LSB1YGR136W ISM1P48526 1002 aa6.75□□□□□ -1.33
LSB1YGR136W YDR090CQ03193 310 aa6.75□□□□□ -1.33
LSB1YGR136W TFB4Q12004 338 aa6.74□□□□□ -1.33
LSB1YGR136W REV3P14284 1504 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms