RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W XDJ1P39102 459 aa2.47□□□□□ -2.01
CSE1YGL238W CST9Q06032 482 aa2.47□□□□□ -2.01
CSE1YGL238W YEL023CP39992 682 aa2.46□□□□□ -2.02
CSE1YGL238W MGA2P40578 1113 aa2.46□□□□□ -2.02
CSE1YGL238W DCW1P36091 449 aa2.45□□□□□ -2.02
CSE1YGL238W VRP1P37370 817 aa2.45□□□□□ -2.02
CSE1YGL238W RCR1P38212 213 aa2.44□□□□□ -2.02
CSE1YGL238W PML39Q03760 334 aa2.42□□□□□ -2.02
CSE1YGL238W YDR344CQ05510 147 aa2.42□□□□□ -2.02
CSE1YGL238W ELP4Q02884 456 aaKnown RBP2.41□□□□□ -2.02
CSE1YGL238W DPS1P04802 557 aaKnown RBP2.41□□□□□ -2.02
CSE1YGL238W RGA2Q06407 1009 aa2.4□□□□□ -2.02
CSE1YGL238W ARH1P48360 493 aa2.39□□□□□ -2.03
CSE1YGL238W GRE2Q12068 342 aaKnown RBP2.39□□□□□ -2.03
CSE1YGL238W SPT23P35210 1082 aa2.37□□□□□ -2.03
CSE1YGL238W GUT1P32190 709 aa2.37□□□□□ -2.03
CSE1YGL238W MID1P41821 548 aa2.37□□□□□ -2.03
CSE1YGL238W NST1P53935 1240 aa2.36□□□□□ -2.03
CSE1YGL238W ATH1P48016 1211 aa2.36□□□□□ -2.03
CSE1YGL238W SRC1Q03707 834 aa2.36□□□□□ -2.03
CSE1YGL238W RGA1P39083 1007 aa2.35□□□□□ -2.03
CSE1YGL238W PTC3P34221 468 aaKnown RBP2.35□□□□□ -2.03
CSE1YGL238W MIF2P35201 549 aa2.35□□□□□ -2.03
CSE1YGL238W YML082WQ04533 649 aaKnown RBP2.34□□□□□ -2.03
CSE1YGL238W MPH3P0CE00 602 aa2.34□□□□□ -2.04
CSE1YGL238W EDS1P38073 919 aa2.34□□□□□ -2.04
CSE1YGL238W SOL3P38858 249 aa2.34□□□□□ -2.04
CSE1YGL238W HAP5Q02516 242 aa2.34□□□□□ -2.04
CSE1YGL238W AI4P03878 556 aa2.33□□□□□ -2.04
CSE1YGL238W MAK11P20484 414 aaKnown RBP2.33□□□□□ -2.04
CSE1YGL238W BNI4P53858 892 aa2.33□□□□□ -2.04
CSE1YGL238W PEX29Q03370 554 aa2.33□□□□□ -2.04
CSE1YGL238W PTC2P39966 464 aaKnown RBP2.31□□□□□ -2.04
CSE1YGL238W RAM2P29703 316 aa2.31□□□□□ -2.04
CSE1YGL238W ILV3P39522 585 aaKnown RBP2.3□□□□□ -2.04
CSE1YGL238W COQ8P27697 501 aa2.3□□□□□ -2.04
CSE1YGL238W MPC54Q08550 464 aa2.3□□□□□ -2.04
CSE1YGL238W RAS1P01119 309 aa2.29□□□□□ -2.04
CSE1YGL238W NMA111P53920 997 aa2.29□□□□□ -2.04
CSE1YGL238W YGR273CP53329 174 aa2.28□□□□□ -2.04
CSE1YGL238W NOP53Q12080 455 aaKnown RBP2.28□□□□□ -2.04
CSE1YGL238W DPL1Q05567 589 aa2.27□□□□□ -2.05
CSE1YGL238W SLI15P38283 698 aa2.26□□□□□ -2.05
CSE1YGL238W YPR015CQ12531 247 aa2.26□□□□□ -2.05
CSE1YGL238W TRK1P12685 1235 aa2.26□□□□□ -2.05
CSE1YGL238W RAM1P22007 431 aa2.25□□□□□ -2.05
CSE1YGL238W AMS1P22855 1083 aa2.25□□□□□ -2.05
CSE1YGL238W ISU2Q12056 156 aa2.25□□□□□ -2.05
CSE1YGL238W GYP1Q08484 637 aa2.24□□□□□ -2.05
CSE1YGL238W SAS4Q04003 481 aa2.23□□□□□ -2.05
CSE1YGL238W SDH2P21801 266 aa2.22□□□□□ -2.05
CSE1YGL238W YPL062WQ02781 134 aa2.22□□□□□ -2.05
CSE1YGL238W KEX1P09620 729 aa2.21□□□□□ -2.06
CSE1YGL238W CDC73Q06697 393 aa2.21□□□□□ -2.06
CSE1YGL238W PDR1P12383 1068 aa2.2□□□□□ -2.06
CSE1YGL238W YEL077CQ3E7X8 1277 aa2.2□□□□□ -2.06
CSE1YGL238W MRF1P30775 413 aaPredicted RBP2.19□□□□□ -2.06
CSE1YGL238W UBP14P38237 781 aaKnown RBP2.18□□□□□ -2.06
CSE1YGL238W YLR326WQ06170 240 aaKnown RBP2.17□□□□□ -2.06
CSE1YGL238W BUD20Q08004 166 aaPredicted RBP2.17□□□□□ -2.06
CSE1YGL238W PRT1P06103 763 aaKnown RBP2.16□□□□□ -2.06
CSE1YGL238W PCS60P38137 543 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
CSE1YGL238W RPP1BP10622 106 aaKnown RBP2.16□□□□□ -2.06
CSE1YGL238W BRE2P43132 505 aa2.16□□□□□ -2.06
CSE1YGL238W GCR2Q01722 534 aa2.16□□□□□ -2.06
CSE1YGL238W ERG12P07277 443 aa2.15□□□□□ -2.07
CSE1YGL238W GAR1P28007 205 aaKnown RBP2.15□□□□□ -2.07
CSE1YGL238W VHR2P40041 505 aa2.15□□□□□ -2.07
CSE1YGL238W GBP2P25555 427 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
CSE1YGL238W RAD54P32863 898 aa2.14□□□□□ -2.07
CSE1YGL238W AIR1P40507 360 aaKnown RBP2.14□□□□□ -2.07
CSE1YGL238W STR2P47164 639 aa2.13□□□□□ -2.07
CSE1YGL238W YRR1Q12172 810 aa2.13□□□□□ -2.07
CSE1YGL238W CST6P40535 587 aa2.13□□□□□ -2.07
CSE1YGL238W ISM1P48526 1002 aa2.13□□□□□ -2.07
CSE1YGL238W SET1P38827 1080 aaKnown RBP2.12□□□□□ -2.07
CSE1YGL238W CLA4P48562 842 aa2.12□□□□□ -2.07
CSE1YGL238W PEX21P50091 288 aa2.12□□□□□ -2.07
CSE1YGL238W GAP1P19145 602 aaPredicted RBP2.12□□□□□ -2.07
CSE1YGL238W YDR090CQ03193 310 aa2.12□□□□□ -2.07
CSE1YGL238W LAM6Q08001 693 aa2.12□□□□□ -2.07
CSE1YGL238W TFB4Q12004 338 aa2.12□□□□□ -2.07
CSE1YGL238W CDC4P07834 779 aa2.11□□□□□ -2.07
CSE1YGL238W MET22P32179 357 aa2.11□□□□□ -2.07
CSE1YGL238W CSC1Q06538 782 aa2.11□□□□□ -2.07
CSE1YGL238W NUD1P32336 851 aa2.11□□□□□ -2.07
CSE1YGL238W SPT16P32558 1035 aaKnown RBP2.1□□□□□ -2.07
CSE1YGL238W NPL4P33755 580 aa2.1□□□□□ -2.07
CSE1YGL238W ENV9Q08651 330 aa2.1□□□□□ -2.07
CSE1YGL238W TUM1Q08686 304 aaKnown RBP2.1□□□□□ -2.07
CSE1YGL238W SEC2P17065 759 aa2.09□□□□□ -2.07
CSE1YGL238W GCD11P32481 527 aaKnown RBP2.09□□□□□ -2.07
CSE1YGL238W KIC1P38692 1080 aa2.09□□□□□ -2.07
CSE1YGL238W TY1A-DR4O74302 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-HP0C2I4 478 aaKnown RBP2.09□□□□□ -2.08
CSE1YGL238W TY1A-AP0CX57 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-PR1P0CX58 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-ORP0CX59 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-PR2P0CX60 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-DR5P0CX65 440 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms