RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W RCR1P38212 213 aa7.76□□□□□ -1.17
LIF1YGL090W PTC4P38089 393 aa7.75□□□□□ -1.17
LIF1YGL090W DCW1P36091 449 aa7.74□□□□□ -1.17
LIF1YGL090W PRE3P38624 215 aa7.74□□□□□ -1.17
LIF1YGL090W YEL023CP39992 682 aa7.72□□□□□ -1.17
LIF1YGL090W VRP1P37370 817 aa7.61□□□□□ -1.19
LIF1YGL090W XDJ1P39102 459 aa7.6□□□□□ -1.19
LIF1YGL090W PML39Q03760 334 aa7.59□□□□□ -1.19
LIF1YGL090W GRE2Q12068 342 aaKnown RBP7.59□□□□□ -1.19
LIF1YGL090W ELP4Q02884 456 aaKnown RBP7.58□□□□□ -1.2
LIF1YGL090W YDR344CQ05510 147 aa7.53□□□□□ -1.2
LIF1YGL090W ATH1P48016 1211 aa7.52□□□□□ -1.21
LIF1YGL090W MIF2P35201 549 aa7.51□□□□□ -1.21
LIF1YGL090W GUT1P32190 709 aa7.49□□□□□ -1.21
LIF1YGL090W DPS1P04802 557 aaKnown RBP7.48□□□□□ -1.21
LIF1YGL090W ARH1P48360 493 aa7.48□□□□□ -1.21
LIF1YGL090W PTC3P34221 468 aaKnown RBP7.46□□□□□ -1.22
LIF1YGL090W MAK11P20484 414 aaKnown RBP7.45□□□□□ -1.22
LIF1YGL090W MID1P41821 548 aa7.44□□□□□ -1.22
LIF1YGL090W EDS1P38073 919 aa7.42□□□□□ -1.22
LIF1YGL090W SPT23P35210 1082 aa7.41□□□□□ -1.22
LIF1YGL090W PEX29Q03370 554 aa7.41□□□□□ -1.22
LIF1YGL090W NST1P53935 1240 aa7.4□□□□□ -1.22
LIF1YGL090W RAM2P29703 316 aa7.38□□□□□ -1.23
LIF1YGL090W AI4P03878 556 aa7.36□□□□□ -1.23
LIF1YGL090W MPH3P0CE00 602 aa7.36□□□□□ -1.23
LIF1YGL090W COQ8P27697 501 aa7.35□□□□□ -1.23
LIF1YGL090W SOL3P38858 249 aa7.35□□□□□ -1.23
LIF1YGL090W HAP5Q02516 242 aa7.35□□□□□ -1.23
LIF1YGL090W BNI4P53858 892 aa7.31□□□□□ -1.24
LIF1YGL090W PTC2P39966 464 aaKnown RBP7.29□□□□□ -1.24
LIF1YGL090W YML082WQ04533 649 aaKnown RBP7.29□□□□□ -1.24
LIF1YGL090W ILV3P39522 585 aaKnown RBP7.26□□□□□ -1.25
LIF1YGL090W SRC1Q03707 834 aa7.25□□□□□ -1.25
LIF1YGL090W MPC54Q08550 464 aa7.24□□□□□ -1.25
LIF1YGL090W YGR273CP53329 174 aa7.23□□□□□ -1.25
LIF1YGL090W NOP53Q12080 455 aaKnown RBP7.22□□□□□ -1.25
LIF1YGL090W NMA111P53920 997 aa7.21□□□□□ -1.26
LIF1YGL090W DPL1Q05567 589 aa7.17□□□□□ -1.26
LIF1YGL090W RGA2Q06407 1009 aa7.17□□□□□ -1.26
LIF1YGL090W SLI15P38283 698 aa7.16□□□□□ -1.26
LIF1YGL090W RGA1P39083 1007 aa7.13□□□□□ -1.27
LIF1YGL090W RAS1P01119 309 aa7.12□□□□□ -1.27
LIF1YGL090W ISU2Q12056 156 aa7.09□□□□□ -1.27
LIF1YGL090W YPR015CQ12531 247 aa7.08□□□□□ -1.28
LIF1YGL090W GYP1Q08484 637 aa7.07□□□□□ -1.28
LIF1YGL090W KEX1P09620 729 aa7.05□□□□□ -1.28
LIF1YGL090W RAM1P22007 431 aa7.05□□□□□ -1.28
LIF1YGL090W AMS1P22855 1083 aa7.03□□□□□ -1.28
LIF1YGL090W TRK1P12685 1235 aa7.02□□□□□ -1.29
LIF1YGL090W CDC73Q06697 393 aa7□□□□□ -1.29
LIF1YGL090W SAS4Q04003 481 aa6.99□□□□□ -1.29
LIF1YGL090W PDR1P12383 1068 aa6.96□□□□□ -1.3
LIF1YGL090W SET1P38827 1080 aaKnown RBP6.96□□□□□ -1.3
LIF1YGL090W YLR326WQ06170 240 aaKnown RBP6.93□□□□□ -1.3
LIF1YGL090W YEL077CQ3E7X8 1277 aa6.93□□□□□ -1.3
LIF1YGL090W RPP1BP10622 106 aaKnown RBP6.92□□□□□ -1.3
LIF1YGL090W UBP14P38237 781 aaKnown RBP6.92□□□□□ -1.3
LIF1YGL090W SDH2P21801 266 aa6.91□□□□□ -1.3
LIF1YGL090W MRF1P30775 413 aaPredicted RBP6.9□□□□□ -1.3
LIF1YGL090W VHR2P40041 505 aa6.9□□□□□ -1.3
LIF1YGL090W RAD54P32863 898 aa6.89□□□□□ -1.31
LIF1YGL090W PCS60P38137 543 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
LIF1YGL090W PRT1P06103 763 aaKnown RBP6.82□□□□□ -1.32
LIF1YGL090W BUD20Q08004 166 aaPredicted RBP6.82□□□□□ -1.32
LIF1YGL090W PEX21P50091 288 aa6.81□□□□□ -1.32
LIF1YGL090W ERG12P07277 443 aa6.8□□□□□ -1.32
LIF1YGL090W YPL062WQ02781 134 aa6.8□□□□□ -1.32
LIF1YGL090W YRR1Q12172 810 aa6.8□□□□□ -1.32
LIF1YGL090W KIC1P38692 1080 aa6.78□□□□□ -1.32
LIF1YGL090W GCR2Q01722 534 aa6.76□□□□□ -1.33
LIF1YGL090W BRE2P43132 505 aa6.75□□□□□ -1.33
LIF1YGL090W STR2P47164 639 aa6.75□□□□□ -1.33
LIF1YGL090W ISM1P48526 1002 aa6.74□□□□□ -1.33
LIF1YGL090W YDR090CQ03193 310 aa6.74□□□□□ -1.33
LIF1YGL090W TFB4Q12004 338 aa6.74□□□□□ -1.33
LIF1YGL090W CSC1Q06538 782 aa6.73□□□□□ -1.33
LIF1YGL090W GBP2P25555 427 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
LIF1YGL090W NUD1P32336 851 aa6.72□□□□□ -1.33
LIF1YGL090W NPL4P33755 580 aa6.72□□□□□ -1.33
LIF1YGL090W TUM1Q08686 304 aaKnown RBP6.72□□□□□ -1.33
LIF1YGL090W GAP1P19145 602 aaPredicted RBP6.71□□□□□ -1.34
LIF1YGL090W GAR1P28007 205 aaKnown RBP6.71□□□□□ -1.34
LIF1YGL090W IFH1P39520 1085 aa6.71□□□□□ -1.34
LIF1YGL090W AIR1P40507 360 aaKnown RBP6.71□□□□□ -1.34
LIF1YGL090W CST6P40535 587 aa6.7□□□□□ -1.34
LIF1YGL090W VPS70P47161 811 aa6.69□□□□□ -1.34
LIF1YGL090W SPT16P32558 1035 aaKnown RBP6.68□□□□□ -1.34
LIF1YGL090W GCD11P32481 527 aaKnown RBP6.67□□□□□ -1.34
LIF1YGL090W CLA4P48562 842 aa6.67□□□□□ -1.34
LIF1YGL090W YPR148CQ06523 435 aa6.67□□□□□ -1.34
LIF1YGL090W LAM6Q08001 693 aa6.66□□□□□ -1.34
LIF1YGL090W REF2P42073 533 aaPredicted RBP6.64□□□□□ -1.35
LIF1YGL090W FRK1Q03002 865 aaPredicted RBP6.63□□□□□ -1.35
LIF1YGL090W CDC4P07834 779 aa6.62□□□□□ -1.35
LIF1YGL090W TY1A-DR4O74302 440 aa6.61□□□□□ -1.35
LIF1YGL090W TY1A-HP0C2I4 478 aaKnown RBP6.61□□□□□ -1.35
LIF1YGL090W TY1A-AP0CX57 440 aa6.61□□□□□ -1.35
LIF1YGL090W TY1A-PR1P0CX58 440 aa6.61□□□□□ -1.35
LIF1YGL090W TY1A-ORP0CX59 440 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms