RNA–Protein interactions for RNA: YFL045C

SEC53, Transcript of Phosphomannomutase, yeastyeast

Gene SEC53, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC53YFL045C DMA1P38823 416 aa6.6□□□□□ -1.35
SEC53YFL045C ATH1P48016 1211 aa6.6□□□□□ -1.35
SEC53YFL045C SOL3P38858 249 aa6.59□□□□□ -1.35
SEC53YFL045C DAN4P47179 1161 aa6.59□□□□□ -1.35
SEC53YFL045C YNL035CP53962 389 aaKnown RBP6.59□□□□□ -1.35
SEC53YFL045C JIP4Q03361 876 aa6.58□□□□□ -1.36
SEC53YFL045C YPR148CQ06523 435 aa6.58□□□□□ -1.36
SEC53YFL045C RTG1P32607 177 aa6.57□□□□□ -1.36
SEC53YFL045C SEC61P32915 480 aa6.56□□□□□ -1.36
SEC53YFL045C YEL023CP39992 682 aa6.56□□□□□ -1.36
SEC53YFL045C PTC4P38089 393 aa6.55□□□□□ -1.36
SEC53YFL045C IFH1P39520 1085 aa6.53□□□□□ -1.36
SEC53YFL045C YGR273CP53329 174 aa6.53□□□□□ -1.36
SEC53YFL045C ILV3P39522 585 aaKnown RBP6.51□□□□□ -1.37
SEC53YFL045C NCR1Q12200 1170 aa6.51□□□□□ -1.37
SEC53YFL045C AI4P03878 556 aa6.5□□□□□ -1.37
SEC53YFL045C MPH3P0CE00 602 aa6.5□□□□□ -1.37
SEC53YFL045C SAS10Q12136 610 aaPredicted RBP6.5□□□□□ -1.37
SEC53YFL045C RQC2Q12532 1038 aaKnown RBP6.46□□□□□ -1.38
SEC53YFL045C UBP14P38237 781 aaKnown RBP6.45□□□□□ -1.38
SEC53YFL045C YDL129WQ07555 291 aa6.45□□□□□ -1.38
SEC53YFL045C YLR326WQ06170 240 aaKnown RBP6.44□□□□□ -1.38
SEC53YFL045C BMT6Q12291 365 aa6.44□□□□□ -1.38
SEC53YFL045C YJL171CP46992 396 aa6.43□□□□□ -1.38
SEC53YFL045C KEX1P09620 729 aa6.42□□□□□ -1.38
SEC53YFL045C VPS70P47161 811 aa6.42□□□□□ -1.38
SEC53YFL045C TFG1P41895 735 aaPredicted RBP6.41□□□□□ -1.38
SEC53YFL045C PML39Q03760 334 aa6.4□□□□□ -1.38
SEC53YFL045C VHR2P40041 505 aa6.39□□□□□ -1.39
SEC53YFL045C REF2P42073 533 aaPredicted RBP6.39□□□□□ -1.39
SEC53YFL045C YDR090CQ03193 310 aa6.39□□□□□ -1.39
SEC53YFL045C SAP30P38429 201 aa6.38□□□□□ -1.39
SEC53YFL045C SLI15P38283 698 aa6.37□□□□□ -1.39
SEC53YFL045C MID1P41821 548 aa6.37□□□□□ -1.39
SEC53YFL045C PCS60P38137 543 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SEC53YFL045C CKB1P43639 278 aa6.36□□□□□ -1.39
SEC53YFL045C YDR344CQ05510 147 aa6.36□□□□□ -1.39
SEC53YFL045C RAD54P32863 898 aa6.34□□□□□ -1.39
SEC53YFL045C MAK21Q12176 1025 aaKnown RBP6.33□□□□□ -1.4
SEC53YFL045C ARH1P48360 493 aa6.32□□□□□ -1.4
SEC53YFL045C MPC54Q08550 464 aa6.32□□□□□ -1.4
SEC53YFL045C COX6P00427 148 aa6.31□□□□□ -1.4
SEC53YFL045C PRE3P38624 215 aa6.31□□□□□ -1.4
SEC53YFL045C CHL1P22516 861 aaPredicted RBP6.29□□□□□ -1.4
SEC53YFL045C PEX29Q03370 554 aa6.29□□□□□ -1.4
SEC53YFL045C PBS2P08018 668 aa6.28□□□□□ -1.4
SEC53YFL045C DSF2P38213 736 aa6.28□□□□□ -1.4
SEC53YFL045C DPL1Q05567 589 aa6.28□□□□□ -1.4
SEC53YFL045C GAP1P19145 602 aaPredicted RBP6.27□□□□□ -1.41
SEC53YFL045C CDC73Q06697 393 aa6.27□□□□□ -1.41
SEC53YFL045C KIC1P38692 1080 aa6.25□□□□□ -1.41
SEC53YFL045C ORC6P38826 435 aa6.25□□□□□ -1.41
SEC53YFL045C HAP5Q02516 242 aa6.25□□□□□ -1.41
SEC53YFL045C NMA111P53920 997 aa6.24□□□□□ -1.41
SEC53YFL045C ELP4Q02884 456 aaKnown RBP6.24□□□□□ -1.41
SEC53YFL045C BNI4P53858 892 aa6.23□□□□□ -1.41
SEC53YFL045C ISU2Q12056 156 aa6.23□□□□□ -1.41
SEC53YFL045C SPT23P35210 1082 aa6.22□□□□□ -1.41
SEC53YFL045C RPP1BP10622 106 aaKnown RBP6.19□□□□□ -1.42
SEC53YFL045C CSC1Q06538 782 aa6.19□□□□□ -1.42
SEC53YFL045C MAM3Q12296 706 aa6.19□□□□□ -1.42
SEC53YFL045C RAM1P22007 431 aa6.18□□□□□ -1.42
SEC53YFL045C NUP42P49686 430 aaKnown RBP6.18□□□□□ -1.42
SEC53YFL045C YML082WQ04533 649 aaKnown RBP6.18□□□□□ -1.42
SEC53YFL045C TFB4Q12004 338 aa6.18□□□□□ -1.42
SEC53YFL045C SPB4P25808 606 aaPredicted RBP6.16□□□□□ -1.42
SEC53YFL045C BCK2P33306 851 aa6.16□□□□□ -1.42
SEC53YFL045C IES2P40154 320 aa6.16□□□□□ -1.42
SEC53YFL045C RGR1P19263 1082 aa6.15□□□□□ -1.42
SEC53YFL045C MVP1P40959 511 aaKnown RBP6.15□□□□□ -1.42
SEC53YFL045C PSE1P32337 1089 aaKnown RBP6.14□□□□□ -1.43
SEC53YFL045C PTC2P39966 464 aaKnown RBP6.14□□□□□ -1.43
SEC53YFL045C YPR015CQ12531 247 aa6.14□□□□□ -1.43
SEC53YFL045C PDR1P12383 1068 aa6.12□□□□□ -1.43
SEC53YFL045C VRP1P37370 817 aa6.11□□□□□ -1.43
SEC53YFL045C DIT2P21595 489 aa6.1□□□□□ -1.43
SEC53YFL045C YRR1Q12172 810 aa6.1□□□□□ -1.43
SEC53YFL045C LEU3P08638 886 aa6.09□□□□□ -1.43
SEC53YFL045C XDJ1P39102 459 aa6.09□□□□□ -1.43
SEC53YFL045C PEX21P50091 288 aa6.09□□□□□ -1.43
SEC53YFL045C TUM1Q08686 304 aaKnown RBP6.09□□□□□ -1.43
SEC53YFL045C YPR109WQ06104 294 aa6.08□□□□□ -1.44
SEC53YFL045C STR2P47164 639 aa6.06□□□□□ -1.44
SEC53YFL045C YNR021WP53723 404 aaKnown RBP6.06□□□□□ -1.44
SEC53YFL045C SGS1P35187 1447 aa6.06□□□□□ -1.44
SEC53YFL045C CLB5P30283 435 aa6.05□□□□□ -1.44
SEC53YFL045C NUD1P32336 851 aa6.05□□□□□ -1.44
SEC53YFL045C ISM1P48526 1002 aa6.04□□□□□ -1.44
SEC53YFL045C BUD20Q08004 166 aaPredicted RBP6.04□□□□□ -1.44
SEC53YFL045C TY1A-DR4O74302 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-HP0C2I4 478 aaKnown RBP6□□□□□ -1.45
SEC53YFL045C TY1A-AP0CX57 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-PR1P0CX58 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-ORP0CX59 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-PR2P0CX60 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-DR5P0CX65 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-ER2P0CX66 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-GR3P0CX67 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-LR1P0CX68 440 aa6□□□□□ -1.45
SEC53YFL045C TY1A-MR2P0CX69 440 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms