RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B VPS29P38759 282 aa5.46□□□□□ -1.54
SBH1YER087C-B YEL023CP39992 682 aa5.46□□□□□ -1.54
SBH1YER087C-B YLR271WQ06152 274 aa5.46□□□□□ -1.54
SBH1YER087C-B GYP5Q12344 894 aa5.46□□□□□ -1.54
SBH1YER087C-B PTC4P38089 393 aa5.45□□□□□ -1.54
SBH1YER087C-B PML39Q03760 334 aa5.42□□□□□ -1.54
SBH1YER087C-B ABP1P15891 592 aaKnown RBP5.37□□□□□ -1.55
SBH1YER087C-B RTG3P38165 486 aa5.36□□□□□ -1.55
SBH1YER087C-B MID1P41821 548 aa5.29□□□□□ -1.56
SBH1YER087C-B ARH1P48360 493 aa5.29□□□□□ -1.56
SBH1YER087C-B RAS1P01119 309 aa5.27□□□□□ -1.57
SBH1YER087C-B SPT23P35210 1082 aa5.26□□□□□ -1.57
SBH1YER087C-B RCR1P38212 213 aa5.26□□□□□ -1.57
SBH1YER087C-B CST9Q06032 482 aa5.24□□□□□ -1.57
SBH1YER087C-B PEX29Q03370 554 aa5.23□□□□□ -1.57
SBH1YER087C-B YPL062WQ02781 134 aa5.17□□□□□ -1.58
SBH1YER087C-B PTC2P39966 464 aaKnown RBP5.16□□□□□ -1.58
SBH1YER087C-B HAP5Q02516 242 aa5.16□□□□□ -1.58
SBH1YER087C-B GRE2Q12068 342 aaKnown RBP5.16□□□□□ -1.58
SBH1YER087C-B TRK1P12685 1235 aa5.14□□□□□ -1.59
SBH1YER087C-B ARP8Q12386 881 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SBH1YER087C-B YML082WQ04533 649 aaKnown RBP5.11□□□□□ -1.59
SBH1YER087C-B BNI4P53858 892 aa5.1□□□□□ -1.59
SBH1YER087C-B ATH1P48016 1211 aa5.08□□□□□ -1.6
SBH1YER087C-B GAR1P28007 205 aaKnown RBP5.05□□□□□ -1.6
SBH1YER087C-B MGA2P40578 1113 aa5.04□□□□□ -1.6
SBH1YER087C-B GBP2P25555 427 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
SBH1YER087C-B MIF2P35201 549 aa5.03□□□□□ -1.6
SBH1YER087C-B AMS1P22855 1083 aa5.02□□□□□ -1.61
SBH1YER087C-B SSP1P38871 571 aa5.02□□□□□ -1.61
SBH1YER087C-B NST1P53935 1240 aa5.02□□□□□ -1.61
SBH1YER087C-B GUT1P32190 709 aa5.01□□□□□ -1.61
SBH1YER087C-B GYP1Q08484 637 aa5□□□□□ -1.61
SBH1YER087C-B MPC54Q08550 464 aa5□□□□□ -1.61
SBH1YER087C-B YPR015CQ12531 247 aa5□□□□□ -1.61
SBH1YER087C-B SOL3P38858 249 aa4.99□□□□□ -1.61
SBH1YER087C-B NMA111P53920 997 aa4.99□□□□□ -1.61
SBH1YER087C-B MPH3P0CE00 602 aa4.97□□□□□ -1.61
SBH1YER087C-B PTC3P34221 468 aaKnown RBP4.97□□□□□ -1.61
SBH1YER087C-B ILV3P39522 585 aaKnown RBP4.97□□□□□ -1.61
SBH1YER087C-B AI4P03878 556 aa4.95□□□□□ -1.62
SBH1YER087C-B EDS1P38073 919 aa4.94□□□□□ -1.62
SBH1YER087C-B SDH2P21801 266 aa4.89□□□□□ -1.63
SBH1YER087C-B RAM1P22007 431 aa4.88□□□□□ -1.63
SBH1YER087C-B BRE2P43132 505 aa4.87□□□□□ -1.63
SBH1YER087C-B DPL1Q05567 589 aa4.87□□□□□ -1.63
SBH1YER087C-B SLI15P38283 698 aa4.84□□□□□ -1.63
SBH1YER087C-B YEL077CQ3E7X8 1277 aa4.84□□□□□ -1.63
SBH1YER087C-B AIR1P40507 360 aaKnown RBP4.83□□□□□ -1.64
SBH1YER087C-B GCR2Q01722 534 aa4.82□□□□□ -1.64
SBH1YER087C-B PDR1P12383 1068 aa4.81□□□□□ -1.64
SBH1YER087C-B MAK11P20484 414 aaKnown RBP4.79□□□□□ -1.64
SBH1YER087C-B YGR273CP53329 174 aa4.78□□□□□ -1.64
SBH1YER087C-B ISU2Q12056 156 aa4.78□□□□□ -1.64
SBH1YER087C-B CLA4P48562 842 aa4.77□□□□□ -1.65
SBH1YER087C-B SAS4Q04003 481 aa4.77□□□□□ -1.65
SBH1YER087C-B COQ8P27697 501 aa4.76□□□□□ -1.65
SBH1YER087C-B MET22P32179 357 aa4.73□□□□□ -1.65
SBH1YER087C-B MRF1P30775 413 aaPredicted RBP4.72□□□□□ -1.65
SBH1YER087C-B CDC73Q06697 393 aa4.72□□□□□ -1.65
SBH1YER087C-B RAM2P29703 316 aa4.71□□□□□ -1.66
SBH1YER087C-B ERG12P07277 443 aa4.67□□□□□ -1.66
SBH1YER087C-B CST6P40535 587 aa4.67□□□□□ -1.66
SBH1YER087C-B ENV9Q08651 330 aa4.65□□□□□ -1.67
SBH1YER087C-B YDR444WQ04093 687 aa4.64□□□□□ -1.67
SBH1YER087C-B TFA1P36100 482 aa4.63□□□□□ -1.67
SBH1YER087C-B MTC5Q03897 1148 aa4.63□□□□□ -1.67
SBH1YER087C-B BUD20Q08004 166 aaPredicted RBP4.63□□□□□ -1.67
SBH1YER087C-B PRT1P06103 763 aaKnown RBP4.61□□□□□ -1.67
SBH1YER087C-B KEX1P09620 729 aa4.61□□□□□ -1.67
SBH1YER087C-B FRK1Q03002 865 aaPredicted RBP4.61□□□□□ -1.67
SBH1YER087C-B YDL176WQ12027 708 aa4.6□□□□□ -1.67
SBH1YER087C-B CDC4P07834 779 aa4.57□□□□□ -1.68
SBH1YER087C-B LAM6Q08001 693 aa4.56□□□□□ -1.68
SBH1YER087C-B STR2P47164 639 aa4.54□□□□□ -1.68
SBH1YER087C-B ISM1P48526 1002 aa4.53□□□□□ -1.68
SBH1YER087C-B LCB5Q06147 687 aaKnown RBP4.53□□□□□ -1.68
SBH1YER087C-B YRR1Q12172 810 aa4.52□□□□□ -1.69
SBH1YER087C-B SPT16P32558 1035 aaKnown RBP4.5□□□□□ -1.69
SBH1YER087C-B BDP1P46678 594 aa4.5□□□□□ -1.69
SBH1YER087C-B GCD11P32481 527 aaKnown RBP4.47□□□□□ -1.69
SBH1YER087C-B VHR2P40041 505 aa4.47□□□□□ -1.69
SBH1YER087C-B ASH1P34233 588 aa4.46□□□□□ -1.7
SBH1YER087C-B PEX21P50091 288 aa4.46□□□□□ -1.7
SBH1YER087C-B YLR326WQ06170 240 aaKnown RBP4.46□□□□□ -1.7
SBH1YER087C-B NUD1P32336 851 aa4.45□□□□□ -1.7
SBH1YER087C-B PCS60P38137 543 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SBH1YER087C-B NOP53Q12080 455 aaKnown RBP4.45□□□□□ -1.7
SBH1YER087C-B RPP1BP10622 106 aaKnown RBP4.44□□□□□ -1.7
SBH1YER087C-B CAF120P53836 1060 aa4.44□□□□□ -1.7
SBH1YER087C-B NPL4P33755 580 aa4.43□□□□□ -1.7
SBH1YER087C-B RRD1P40454 393 aaKnown RBP4.43□□□□□ -1.7
SBH1YER087C-B HED1Q03937 162 aa4.43□□□□□ -1.7
SBH1YER087C-B UBP14P38237 781 aaKnown RBP4.42□□□□□ -1.7
SBH1YER087C-B RRN7P40992 514 aa4.42□□□□□ -1.7
SBH1YER087C-B TY1A-DR4O74302 440 aa4.41□□□□□ -1.7
SBH1YER087C-B TY1A-HP0C2I4 478 aaKnown RBP4.41□□□□□ -1.7
SBH1YER087C-B TY1A-AP0CX57 440 aa4.41□□□□□ -1.7
SBH1YER087C-B TY1A-PR1P0CX58 440 aa4.41□□□□□ -1.7
SBH1YER087C-B TY1A-ORP0CX59 440 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms