RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C NTE1Q04958 1679 aa16.53■□□□□ 0.24
SPC25YER018C TAF7Q05021 590 aa16.52■□□□□ 0.24
SPC25YER018C NUP159P40477 1460 aa16.48■□□□□ 0.23
SPC25YER018C RPO21P04050 1733 aaKnown RBP16.48■□□□□ 0.23
SPC25YER018C PDR15Q04182 1529 aaKnown RBP16.45■□□□□ 0.22
SPC25YER018C SNT2P53127 1403 aa16.44■□□□□ 0.22
SPC25YER018C ULS1Q08562 1619 aa16.42■□□□□ 0.22
SPC25YER018C IFH1P39520 1085 aa16.4■□□□□ 0.22
SPC25YER018C RTT106P40161 455 aa16.4■□□□□ 0.22
SPC25YER018C YRF1-1P0CX20 1796 aa16.38■□□□□ 0.21
SPC25YER018C YRF1-5P0CX21 1796 aa16.38■□□□□ 0.21
SPC25YER018C YRF1-8P0CX22 1796 aa16.38■□□□□ 0.21
SPC25YER018C GEA2P39993 1459 aaKnown RBP16.29■□□□□ 0.2
SPC25YER018C VPS15P22219 1454 aa16.26■□□□□ 0.19
SPC25YER018C GEA1P47102 1408 aaPredicted RBP16.26■□□□□ 0.19
SPC25YER018C MET10P39692 1035 aa16.25■□□□□ 0.19
SPC25YER018C LTE1P07866 1435 aa16.23■□□□□ 0.19
SPC25YER018C IRC20Q06554 1556 aa16.18■□□□□ 0.18
SPC25YER018C SPO14P36126 1683 aa16.18■□□□□ 0.18
SPC25YER018C PDR12Q02785 1511 aa16.13■□□□□ 0.17
SPC25YER018C TY3B-GQ99315 1547 aa16.1■□□□□ 0.17
SPC25YER018C NUP157P40064 1391 aaKnown RBP16.09■□□□□ 0.17
SPC25YER018C GDB1Q06625 1536 aa16.08■□□□□ 0.16
SPC25YER018C YBT1P32386 1661 aa16.06■□□□□ 0.16
SPC25YER018C CAT8P39113 1433 aa16.05■□□□□ 0.16
SPC25YER018C PDR10P51533 1564 aa16.03■□□□□ 0.16
SPC25YER018C DRS2P39524 1355 aa16■□□□□ 0.15
SPC25YER018C NUP170P38181 1502 aa16■□□□□ 0.15
SPC25YER018C IKI3Q06706 1349 aaKnown RBP15.97■□□□□ 0.15
SPC25YER018C ITT1Q04638 464 aa15.97■□□□□ 0.15
SPC25YER018C BNI1P41832 1953 aa15.95■□□□□ 0.14
SPC25YER018C CKB1P43639 278 aa15.95■□□□□ 0.14
SPC25YER018C IQG1Q12280 1495 aa15.95■□□□□ 0.14
SPC25YER018C ARO1P08566 1588 aaKnown RBP15.91■□□□□ 0.14
SPC25YER018C BUD3P25558 1636 aa15.89■□□□□ 0.13
SPC25YER018C DOP1Q03921 1698 aa15.8■□□□□ 0.12
SPC25YER018C SRB8P25648 1427 aa15.79■□□□□ 0.12
SPC25YER018C MMS1Q06211 1407 aa15.79■□□□□ 0.12
SPC25YER018C SSM4P40318 1319 aa15.79■□□□□ 0.12
SPC25YER018C YSP2Q06681 1438 aa15.77■□□□□ 0.11
SPC25YER018C TRM3Q07527 1436 aa15.76■□□□□ 0.11
SPC25YER018C BNR1P40450 1375 aa15.7■□□□□ 0.1
SPC25YER018C SEC7P11075 2009 aaKnown RBP15.7■□□□□ 0.1
SPC25YER018C BUD21Q08492 214 aaPredicted RBP15.68■□□□□ 0.1
SPC25YER018C CHC1P22137 1653 aaKnown RBP15.67■□□□□ 0.1
SPC25YER018C DNF2Q12675 1612 aa15.59■□□□□ 0.09
SPC25YER018C ABP1P15891 592 aaKnown RBP15.54■□□□□ 0.08
SPC25YER018C GCN2P15442 1659 aa15.44■□□□□ 0.06
SPC25YER018C YOR093CQ12275 1648 aa15.4■□□□□ 0.06
SPC25YER018C URN1Q06525 465 aaKnown RBP15.37■□□□□ 0.05
SPC25YER018C NUP188P52593 1655 aaKnown RBP15.35■□□□□ 0.05
SPC25YER018C YAP3P38749 330 aa15.33■□□□□ 0.04
SPC25YER018C VMR1P38735 1592 aa15.31■□□□□ 0.04
SPC25YER018C PDR5P33302 1511 aaKnown RBP15.27■□□□□ 0.03
SPC25YER018C PAF1P38351 445 aa15.26■□□□□ 0.03
SPC25YER018C IPL1P38991 367 aa15.26■□□□□ 0.03
SPC25YER018C IML1P47170 1584 aa15.25■□□□□ 0.03
SPC25YER018C DNF3Q12674 1656 aa15.23■□□□□ 0.03
SPC25YER018C TYS1P36421 394 aaKnown RBP15.22■□□□□ 0.03
SPC25YER018C NOP7P53261 605 aaKnown RBP15.22■□□□□ 0.03
SPC25YER018C MIF2P35201 549 aa15.21■□□□□ 0.03
SPC25YER018C PDR11P40550 1411 aa15.17■□□□□ 0.02
SPC25YER018C BFR2Q06631 534 aaKnown RBP15.16■□□□□ 0.02
SPC25YER018C RAV1P47104 1357 aa15.1■□□□□ 0.01
SPC25YER018C MAK10Q02197 733 aa15.08■□□□□ 0
SPC25YER018C RTC1Q08281 1341 aa15.04■□□□□ -0
SPC25YER018C HAP1P0CE41 1502 aa15.02□□□□□ -0.01
SPC25YER018C NUP192P47054 1683 aa14.93□□□□□ -0.02
SPC25YER018C TAF5P38129 798 aa14.92□□□□□ -0.02
SPC25YER018C USO1P25386 1790 aa14.92□□□□□ -0.02
SPC25YER018C ESL2P36168 1195 aa14.89□□□□□ -0.03
SPC25YER018C MRX12P47084 519 aa14.88□□□□□ -0.03
SPC25YER018C RAD9P14737 1309 aa14.87□□□□□ -0.03
SPC25YER018C ALD4P46367 519 aaKnown RBP14.86□□□□□ -0.03
SPC25YER018C ORC1P54784 914 aaPredicted RBP14.86□□□□□ -0.03
SPC25YER018C CAB1Q04430 367 aa14.85□□□□□ -0.03
SPC25YER018C KRE5P22023 1365 aa14.85□□□□□ -0.03
SPC25YER018C BCK1Q01389 1478 aa14.84□□□□□ -0.03
SPC25YER018C RIA1P53893 1110 aa14.82□□□□□ -0.04
SPC25YER018C TY1B-NL2Q99337 1749 aaKnown RBP14.81□□□□□ -0.04
SPC25YER018C POL5P39985 1022 aaKnown RBP14.81□□□□□ -0.04
SPC25YER018C YFR006WP43590 535 aa14.77□□□□□ -0.05
SPC25YER018C KIP3P53086 805 aaKnown RBP14.76□□□□□ -0.05
SPC25YER018C TAF8Q03750 510 aa14.76□□□□□ -0.05
SPC25YER018C NAP1P25293 417 aaKnown RBP14.75□□□□□ -0.05
SPC25YER018C YMR196WQ04336 1088 aa14.74□□□□□ -0.05
SPC25YER018C TY3B-IQ7LHG5 1498 aaKnown RBP14.74□□□□□ -0.05
SPC25YER018C CFT1Q06632 1357 aaKnown RBP14.73□□□□□ -0.05
SPC25YER018C SPE2P21182 396 aa14.69□□□□□ -0.06
SPC25YER018C THI12P42883 340 aa14.68□□□□□ -0.06
SPC25YER018C THI5P43534 340 aa14.68□□□□□ -0.06
SPC25YER018C THI11P47183 340 aa14.68□□□□□ -0.06
SPC25YER018C THI13Q07748 340 aa14.68□□□□□ -0.06
SPC25YER018C YNR029CP53729 429 aaKnown RBP14.67□□□□□ -0.06
SPC25YER018C YLR419WQ06698 1435 aaKnown RBP14.64□□□□□ -0.07
SPC25YER018C SCT1P32784 759 aa14.59□□□□□ -0.07
SPC25YER018C CHZ1P40019 153 aaPredicted RBP14.57□□□□□ -0.08
SPC25YER018C RCM1P53972 490 aa14.57□□□□□ -0.08
SPC25YER018C MHP1P43638 1398 aa14.54□□□□□ -0.08
SPC25YER018C PPH3P32345 308 aa14.5□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms