RNA–Protein interactions for RNA: YEL071W

DLD3, Transcript of D-lactate dehydrogenase, yeastyeast

Gene DLD3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DLD3YEL071W TY1B-JR2P47100 1755 aaKnown RBP12.48□□□□□ -0.41
DLD3YEL071W TY1B-ER2Q03619 1755 aa12.48□□□□□ -0.41
DLD3YEL071W TY1B-MR1Q04214 1755 aa12.48□□□□□ -0.41
DLD3YEL071W TY1B-MR2Q04670 1755 aaKnown RBP12.48□□□□□ -0.41
DLD3YEL071W TY1B-LR1Q12088 1755 aaKnown RBP12.48□□□□□ -0.41
DLD3YEL071W TY1B-NL1Q12112 1755 aa12.48□□□□□ -0.41
DLD3YEL071W TY1B-GR1Q12141 1755 aa12.48□□□□□ -0.41
DLD3YEL071W TY1B-BLQ12490 1755 aa12.48□□□□□ -0.41
DLD3YEL071W ESC1Q03661 1658 aaKnown RBP12.48□□□□□ -0.41
DLD3YEL071W TY3B-GQ99315 1547 aa12.45□□□□□ -0.42
DLD3YEL071W SNT2P53127 1403 aa12.45□□□□□ -0.42
DLD3YEL071W YBT1P32386 1661 aa12.36□□□□□ -0.43
DLD3YEL071W NTE1Q04958 1679 aa12.36□□□□□ -0.43
DLD3YEL071W RPA190P10964 1664 aaKnown RBP12.36□□□□□ -0.43
DLD3YEL071W DNF1P32660 1571 aa12.34□□□□□ -0.43
DLD3YEL071W RPO21P04050 1733 aaKnown RBP12.33□□□□□ -0.44
DLD3YEL071W IRC20Q06554 1556 aa12.32□□□□□ -0.44
DLD3YEL071W VPS15P22219 1454 aa12.32□□□□□ -0.44
DLD3YEL071W GEA2P39993 1459 aaKnown RBP12.32□□□□□ -0.44
DLD3YEL071W RTT106P40161 455 aa12.31□□□□□ -0.44
DLD3YEL071W CAT8P39113 1433 aa12.26□□□□□ -0.45
DLD3YEL071W NUP159P40477 1460 aa12.21□□□□□ -0.45
DLD3YEL071W GDB1Q06625 1536 aa12.18□□□□□ -0.46
DLD3YEL071W ARO1P08566 1588 aaKnown RBP12.17□□□□□ -0.46
DLD3YEL071W SRB8P25648 1427 aa12.14□□□□□ -0.47
DLD3YEL071W PDR10P51533 1564 aa12.14□□□□□ -0.47
DLD3YEL071W SPO14P36126 1683 aa12.12□□□□□ -0.47
DLD3YEL071W PDR12Q02785 1511 aa12.11□□□□□ -0.47
DLD3YEL071W YRF1-1P0CX20 1796 aa12.1□□□□□ -0.47
DLD3YEL071W YRF1-5P0CX21 1796 aa12.1□□□□□ -0.47
DLD3YEL071W YRF1-8P0CX22 1796 aa12.1□□□□□ -0.47
DLD3YEL071W CKB1P43639 278 aa12.09□□□□□ -0.47
DLD3YEL071W MET10P39692 1035 aa12.08□□□□□ -0.48
DLD3YEL071W NUP157P40064 1391 aaKnown RBP12.07□□□□□ -0.48
DLD3YEL071W POL5P39985 1022 aaKnown RBP12.05□□□□□ -0.48
DLD3YEL071W GCN2P15442 1659 aa12.05□□□□□ -0.48
DLD3YEL071W BUD3P25558 1636 aa12.05□□□□□ -0.48
DLD3YEL071W NSR1P27476 414 aaKnown RBP RIP-Chip data12.02□□□□□ -0.48not detected
DLD3YEL071W MET5P47169 1442 aa11.99□□□□□ -0.49
DLD3YEL071W BUD21Q08492 214 aaPredicted RBP11.97□□□□□ -0.49
DLD3YEL071W YSP2Q06681 1438 aa11.96□□□□□ -0.49
DLD3YEL071W MMS1Q06211 1407 aa11.94□□□□□ -0.5
DLD3YEL071W IQG1Q12280 1495 aa11.91□□□□□ -0.5
DLD3YEL071W NOP7P53261 605 aaKnown RBP11.89□□□□□ -0.51
DLD3YEL071W YOR093CQ12275 1648 aa11.85□□□□□ -0.51
DLD3YEL071W PDR5P33302 1511 aaKnown RBP11.84□□□□□ -0.51
DLD3YEL071W BNR1P40450 1375 aa11.82□□□□□ -0.52
DLD3YEL071W SEC7P11075 2009 aaKnown RBP11.82□□□□□ -0.52
DLD3YEL071W SPT7P35177 1332 aa11.82□□□□□ -0.52
DLD3YEL071W ENP1P38333 483 aaKnown RBP11.82□□□□□ -0.52
DLD3YEL071W SEC3P33332 1336 aaKnown RBP11.81□□□□□ -0.52
DLD3YEL071W CHC1P22137 1653 aaKnown RBP11.79□□□□□ -0.52
DLD3YEL071W PAF1P38351 445 aa11.79□□□□□ -0.52
DLD3YEL071W LTE1P07866 1435 aa11.76□□□□□ -0.53
DLD3YEL071W NOP2P40991 618 aaKnown RBP11.76□□□□□ -0.53
DLD3YEL071W ISW2Q08773 1120 aa11.74□□□□□ -0.53
DLD3YEL071W ORC1P54784 914 aaPredicted RBP11.71□□□□□ -0.53
DLD3YEL071W FAP1P53971 965 aa11.7□□□□□ -0.54
DLD3YEL071W MHP1P43638 1398 aa11.69□□□□□ -0.54
DLD3YEL071W VMR1P38735 1592 aa11.69□□□□□ -0.54
DLD3YEL071W DOP1Q03921 1698 aa11.69□□□□□ -0.54
DLD3YEL071W PDR11P40550 1411 aa11.68□□□□□ -0.54
DLD3YEL071W RAV1P47104 1357 aa11.67□□□□□ -0.54
DLD3YEL071W TRM3Q07527 1436 aa11.66□□□□□ -0.54
DLD3YEL071W TY3B-IQ7LHG5 1498 aaKnown RBP11.64□□□□□ -0.55
DLD3YEL071W NUP188P52593 1655 aaKnown RBP11.64□□□□□ -0.55
DLD3YEL071W RTC1Q08281 1341 aa11.64□□□□□ -0.55
DLD3YEL071W LEU3P08638 886 aa11.63□□□□□ -0.55
DLD3YEL071W IML1P47170 1584 aa11.62□□□□□ -0.55
DLD3YEL071W PSD2P53037 1138 aaKnown RBP11.61□□□□□ -0.55
DLD3YEL071W DRS2P39524 1355 aa11.6□□□□□ -0.55
DLD3YEL071W TAF5P38129 798 aa11.59□□□□□ -0.55
DLD3YEL071W PRI1P10363 409 aa11.57□□□□□ -0.56
DLD3YEL071W RPG1P38249 964 aaKnown RBP11.57□□□□□ -0.56
DLD3YEL071W NUP192P47054 1683 aa11.55□□□□□ -0.56
DLD3YEL071W YLR419WQ06698 1435 aaKnown RBP11.55□□□□□ -0.56
DLD3YEL071W DNF2Q12675 1612 aa11.53□□□□□ -0.56
DLD3YEL071W PRS1P32895 427 aaKnown RBP11.52□□□□□ -0.56
DLD3YEL071W KIP3P53086 805 aaKnown RBP11.52□□□□□ -0.56
DLD3YEL071W ESL2P36168 1195 aa11.51□□□□□ -0.57
DLD3YEL071W PDS5Q04264 1277 aa11.51□□□□□ -0.57
DLD3YEL071W BNI1P41832 1953 aa11.45□□□□□ -0.58
DLD3YEL071W TYS1P36421 394 aaKnown RBP11.44□□□□□ -0.58
DLD3YEL071W NST1P53935 1240 aa11.44□□□□□ -0.58
DLD3YEL071W ITT1Q04638 464 aa11.44□□□□□ -0.58
DLD3YEL071W IPL1P38991 367 aa11.41□□□□□ -0.58
DLD3YEL071W SPE2P21182 396 aa11.4□□□□□ -0.58
DLD3YEL071W URN1Q06525 465 aaKnown RBP11.38□□□□□ -0.59
DLD3YEL071W SCT1P32784 759 aa11.36□□□□□ -0.59
DLD3YEL071W YAP3P38749 330 aa11.36□□□□□ -0.59
DLD3YEL071W RAD9P14737 1309 aa11.35□□□□□ -0.59
DLD3YEL071W BCK1Q01389 1478 aa11.35□□□□□ -0.59
DLD3YEL071W TAF8Q03750 510 aa11.35□□□□□ -0.59
DLD3YEL071W MLP1Q02455 1875 aaKnown RBP11.34□□□□□ -0.59
DLD3YEL071W AAD16Q02895 342 aa11.33□□□□□ -0.6
DLD3YEL071W RPL17AP05740 184 aaKnown RBP11.32□□□□□ -0.6
DLD3YEL071W ALD4P46367 519 aaKnown RBP11.32□□□□□ -0.6
DLD3YEL071W RPL17BP46990 184 aaKnown RBP11.32□□□□□ -0.6
DLD3YEL071W RTG3P38165 486 aa11.31□□□□□ -0.6
DLD3YEL071W CHZ1P40019 153 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms