RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W BCK2P33306 851 aa8.31□□□□□ -1.08
SDC1YDR469W CHL1P22516 861 aaPredicted RBP8.29□□□□□ -1.08
SDC1YDR469W YEL023CP39992 682 aa8.28□□□□□ -1.08
SDC1YDR469W PTC4P38089 393 aa8.26□□□□□ -1.09
SDC1YDR469W PRE3P38624 215 aa8.26□□□□□ -1.09
SDC1YDR469W YDR344CQ05510 147 aa8.18□□□□□ -1.1
SDC1YDR469W PML39Q03760 334 aa8.14□□□□□ -1.11
SDC1YDR469W GRE2Q12068 342 aaKnown RBP8.13□□□□□ -1.11
SDC1YDR469W VRP1P37370 817 aa8.12□□□□□ -1.11
SDC1YDR469W MIF2P35201 549 aa8.09□□□□□ -1.11
SDC1YDR469W ELP4Q02884 456 aaKnown RBP8.09□□□□□ -1.11
SDC1YDR469W XDJ1P39102 459 aa8.08□□□□□ -1.12
SDC1YDR469W ATH1P48016 1211 aa8.05□□□□□ -1.12
SDC1YDR469W EDS1P38073 919 aa8.04□□□□□ -1.12
SDC1YDR469W PTC3P34221 468 aaKnown RBP8.03□□□□□ -1.12
SDC1YDR469W MID1P41821 548 aa8.03□□□□□ -1.12
SDC1YDR469W GUT1P32190 709 aa8.02□□□□□ -1.13
SDC1YDR469W MAK11P20484 414 aaKnown RBP8.01□□□□□ -1.13
SDC1YDR469W RAM2P29703 316 aa8□□□□□ -1.13
SDC1YDR469W ARH1P48360 493 aa7.98□□□□□ -1.13
SDC1YDR469W NST1P53935 1240 aa7.98□□□□□ -1.13
SDC1YDR469W DPS1P04802 557 aaKnown RBP7.96□□□□□ -1.14
SDC1YDR469W SOL3P38858 249 aa7.95□□□□□ -1.14
SDC1YDR469W PEX29Q03370 554 aa7.93□□□□□ -1.14
SDC1YDR469W COQ8P27697 501 aa7.92□□□□□ -1.14
SDC1YDR469W MPH3P0CE00 602 aa7.89□□□□□ -1.15
SDC1YDR469W SPT23P35210 1082 aa7.89□□□□□ -1.15
SDC1YDR469W AI4P03878 556 aa7.87□□□□□ -1.15
SDC1YDR469W ILV3P39522 585 aaKnown RBP7.87□□□□□ -1.15
SDC1YDR469W HAP5Q02516 242 aa7.85□□□□□ -1.15
SDC1YDR469W BNI4P53858 892 aa7.79□□□□□ -1.16
SDC1YDR469W MPC54Q08550 464 aa7.79□□□□□ -1.16
SDC1YDR469W SRC1Q03707 834 aa7.78□□□□□ -1.16
SDC1YDR469W PTC2P39966 464 aaKnown RBP7.77□□□□□ -1.17
SDC1YDR469W YGR273CP53329 174 aa7.77□□□□□ -1.17
SDC1YDR469W YML082WQ04533 649 aaKnown RBP7.76□□□□□ -1.17
SDC1YDR469W NMA111P53920 997 aa7.73□□□□□ -1.17
SDC1YDR469W SLI15P38283 698 aa7.71□□□□□ -1.18
SDC1YDR469W NOP53Q12080 455 aaKnown RBP7.68□□□□□ -1.18
SDC1YDR469W DPL1Q05567 589 aa7.67□□□□□ -1.18
SDC1YDR469W RAS1P01119 309 aa7.65□□□□□ -1.18
SDC1YDR469W YPR015CQ12531 247 aa7.65□□□□□ -1.18
SDC1YDR469W RGA2Q06407 1009 aa7.6□□□□□ -1.19
SDC1YDR469W RAM1P22007 431 aa7.59□□□□□ -1.19
SDC1YDR469W KEX1P09620 729 aa7.58□□□□□ -1.2
SDC1YDR469W ISU2Q12056 156 aa7.57□□□□□ -1.2
SDC1YDR469W CDC73Q06697 393 aa7.56□□□□□ -1.2
SDC1YDR469W RGA1P39083 1007 aa7.55□□□□□ -1.2
SDC1YDR469W GYP1Q08484 637 aa7.54□□□□□ -1.2
SDC1YDR469W PDR1P12383 1068 aa7.51□□□□□ -1.21
SDC1YDR469W AMS1P22855 1083 aa7.49□□□□□ -1.21
SDC1YDR469W YLR326WQ06170 240 aaKnown RBP7.48□□□□□ -1.21
SDC1YDR469W VHR2P40041 505 aa7.47□□□□□ -1.21
SDC1YDR469W TRK1P12685 1235 aa7.46□□□□□ -1.22
SDC1YDR469W SDH2P21801 266 aa7.46□□□□□ -1.22
SDC1YDR469W UBP14P38237 781 aaKnown RBP7.46□□□□□ -1.22
SDC1YDR469W PCS60P38137 543 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22 RIP-Chip
SDC1YDR469W SET1P38827 1080 aaKnown RBP7.43□□□□□ -1.22
SDC1YDR469W SAS4Q04003 481 aa7.41□□□□□ -1.22
SDC1YDR469W RAD54P32863 898 aa7.4□□□□□ -1.22
SDC1YDR469W YEL077CQ3E7X8 1277 aa7.36□□□□□ -1.23
SDC1YDR469W RPP1BP10622 106 aaKnown RBP7.34□□□□□ -1.23
SDC1YDR469W BUD20Q08004 166 aaPredicted RBP7.33□□□□□ -1.24
SDC1YDR469W YRR1Q12172 810 aa7.32□□□□□ -1.24
SDC1YDR469W PRT1P06103 763 aaKnown RBP7.3□□□□□ -1.24
SDC1YDR469W MRF1P30775 413 aaPredicted RBP7.3□□□□□ -1.24
SDC1YDR469W YDR090CQ03193 310 aa7.29□□□□□ -1.24
SDC1YDR469W STR2P47164 639 aa7.28□□□□□ -1.24
SDC1YDR469W PEX21P50091 288 aa7.28□□□□□ -1.24
SDC1YDR469W ISM1P48526 1002 aa7.26□□□□□ -1.25
SDC1YDR469W KIC1P38692 1080 aa7.25□□□□□ -1.25
SDC1YDR469W AIR1P40507 360 aaKnown RBP7.24□□□□□ -1.25
SDC1YDR469W ERG12P07277 443 aa7.23□□□□□ -1.25
SDC1YDR469W NUD1P32336 851 aa7.23□□□□□ -1.25
SDC1YDR469W TUM1Q08686 304 aaKnown RBP7.23□□□□□ -1.25
SDC1YDR469W GAP1P19145 602 aaPredicted RBP7.22□□□□□ -1.25
SDC1YDR469W YPL062WQ02781 134 aa7.22□□□□□ -1.25
SDC1YDR469W CST6P40535 587 aa7.21□□□□□ -1.26
SDC1YDR469W CLA4P48562 842 aa7.21□□□□□ -1.26
SDC1YDR469W CSC1Q06538 782 aa7.2□□□□□ -1.26
SDC1YDR469W TFB4Q12004 338 aa7.2□□□□□ -1.26
SDC1YDR469W BRE2P43132 505 aa7.19□□□□□ -1.26
SDC1YDR469W NPL4P33755 580 aa7.17□□□□□ -1.26
SDC1YDR469W GAR1P28007 205 aaKnown RBP7.16□□□□□ -1.26
SDC1YDR469W GCD11P32481 527 aaKnown RBP7.16□□□□□ -1.26
SDC1YDR469W TY1A-DR4O74302 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-HP0C2I4 478 aaKnown RBP7.15□□□□□ -1.26
SDC1YDR469W TY1A-AP0CX57 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-PR1P0CX58 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-ORP0CX59 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-PR2P0CX60 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-DR5P0CX65 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-ER2P0CX66 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-GR3P0CX67 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-LR1P0CX68 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-MR2P0CX69 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-JR2P47099 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-DR1Q03856 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-ML1Q04706 440 aaKnown RBP7.15□□□□□ -1.26
SDC1YDR469W TY1A-BRQ12217 440 aa7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms