RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W ATH1P48016 1211 aa10.6□□□□□ -0.71
RRP17YDR412W ABP1P15891 592 aaKnown RBP10.59□□□□□ -0.71
RRP17YDR412W GUT1P32190 709 aa10.59□□□□□ -0.71
RRP17YDR412W YNL035CP53962 389 aaKnown RBP10.58□□□□□ -0.72
RRP17YDR412W YEL023CP39992 682 aa10.57□□□□□ -0.72
RRP17YDR412W DMA1P38823 416 aa10.55□□□□□ -0.72
RRP17YDR412W NOP53Q12080 455 aaKnown RBP10.53□□□□□ -0.72
RRP17YDR412W ILV3P39522 585 aaKnown RBP10.51□□□□□ -0.73
RRP17YDR412W JIP4Q03361 876 aa10.5□□□□□ -0.73
RRP17YDR412W NCR1Q12200 1170 aa10.5□□□□□ -0.73
RRP17YDR412W SEC61P32915 480 aa10.49□□□□□ -0.73
RRP17YDR412W PTC4P38089 393 aa10.48□□□□□ -0.73
RRP17YDR412W YGR273CP53329 174 aa10.45□□□□□ -0.74
RRP17YDR412W YJL171CP46992 396 aa10.41□□□□□ -0.74
RRP17YDR412W YDR344CQ05510 147 aa10.41□□□□□ -0.74
RRP17YDR412W BMT6Q12291 365 aa10.4□□□□□ -0.74
RRP17YDR412W MPH3P0CE00 602 aa10.39□□□□□ -0.75
RRP17YDR412W YPR148CQ06523 435 aa10.38□□□□□ -0.75
RRP17YDR412W AI4P03878 556 aa10.36□□□□□ -0.75
RRP17YDR412W SAP30P38429 201 aa10.36□□□□□ -0.75
RRP17YDR412W MID1P41821 548 aa10.36□□□□□ -0.75
RRP17YDR412W PML39Q03760 334 aa10.36□□□□□ -0.75
RRP17YDR412W YDL129WQ07555 291 aa10.35□□□□□ -0.75
RRP17YDR412W UBP14P38237 781 aaKnown RBP10.31□□□□□ -0.76
RRP17YDR412W VHR2P40041 505 aa10.31□□□□□ -0.76
RRP17YDR412W YLR326WQ06170 240 aaKnown RBP10.31□□□□□ -0.76
RRP17YDR412W KEX1P09620 729 aa10.29□□□□□ -0.76
RRP17YDR412W TFG1P41895 735 aaPredicted RBP10.29□□□□□ -0.76
RRP17YDR412W VPS70P47161 811 aa10.29□□□□□ -0.76
RRP17YDR412W SLI15P38283 698 aa10.25□□□□□ -0.77
RRP17YDR412W YDR090CQ03193 310 aa10.24□□□□□ -0.77
RRP17YDR412W IFH1P39520 1085 aa10.23□□□□□ -0.77
RRP17YDR412W PCS60P38137 543 aaKnown RBP RIP-Chip data10.21□□□□□ -0.77not detected
RRP17YDR412W SAS10Q12136 610 aaPredicted RBP10.2□□□□□ -0.78
RRP17YDR412W PEX29Q03370 554 aa10.16□□□□□ -0.78
RRP17YDR412W MPC54Q08550 464 aa10.16□□□□□ -0.78
RRP17YDR412W REF2P42073 533 aaPredicted RBP10.15□□□□□ -0.78
RRP17YDR412W CDC73Q06697 393 aa10.14□□□□□ -0.79
RRP17YDR412W PRE3P38624 215 aa10.13□□□□□ -0.79
RRP17YDR412W RAD54P32863 898 aa10.11□□□□□ -0.79
RRP17YDR412W ARH1P48360 493 aa10.1□□□□□ -0.79
RRP17YDR412W CHL1P22516 861 aaPredicted RBP10.07□□□□□ -0.8
RRP17YDR412W ELP4Q02884 456 aaKnown RBP10.07□□□□□ -0.8
RRP17YDR412W DPL1Q05567 589 aa10.05□□□□□ -0.8
RRP17YDR412W NMA111P53920 997 aa10.04□□□□□ -0.8
RRP17YDR412W HAP5Q02516 242 aa10.02□□□□□ -0.81
RRP17YDR412W COX6P00427 148 aa10□□□□□ -0.81
RRP17YDR412W PBS2P08018 668 aa9.99□□□□□ -0.81
RRP17YDR412W CKB1P43639 278 aa9.98□□□□□ -0.81
RRP17YDR412W ORC6P38826 435 aa9.97□□□□□ -0.81
RRP17YDR412W GAP1P19145 602 aaPredicted RBP9.96□□□□□ -0.82
RRP17YDR412W KIC1P38692 1080 aa9.96□□□□□ -0.82
RRP17YDR412W SPT23P35210 1082 aa9.94□□□□□ -0.82
RRP17YDR412W YPR015CQ12531 247 aa9.94□□□□□ -0.82
RRP17YDR412W PDR1P12383 1068 aa9.93□□□□□ -0.82
RRP17YDR412W BNI4P53858 892 aa9.93□□□□□ -0.82
RRP17YDR412W RAM1P22007 431 aa9.92□□□□□ -0.82
RRP17YDR412W ISU2Q12056 156 aa9.92□□□□□ -0.82
RRP17YDR412W MAK21Q12176 1025 aaKnown RBP9.92□□□□□ -0.82
RRP17YDR412W RQC2Q12532 1038 aaKnown RBP9.91□□□□□ -0.82
RRP17YDR412W BCK2P33306 851 aa9.9□□□□□ -0.82
RRP17YDR412W VRP1P37370 817 aa9.89□□□□□ -0.83
RRP17YDR412W DSF2P38213 736 aa9.89□□□□□ -0.83
RRP17YDR412W PTC2P39966 464 aaKnown RBP9.85□□□□□ -0.83
RRP17YDR412W IES2P40154 320 aa9.85□□□□□ -0.83
RRP17YDR412W MAM3Q12296 706 aa9.84□□□□□ -0.83
RRP17YDR412W YML082WQ04533 649 aaKnown RBP9.83□□□□□ -0.84
RRP17YDR412W YRR1Q12172 810 aa9.83□□□□□ -0.84
RRP17YDR412W SPB4P25808 606 aaPredicted RBP9.82□□□□□ -0.84
RRP17YDR412W NUP42P49686 430 aaKnown RBP9.82□□□□□ -0.84
RRP17YDR412W MVP1P40959 511 aaKnown RBP9.81□□□□□ -0.84
RRP17YDR412W CSC1Q06538 782 aa9.81□□□□□ -0.84
RRP17YDR412W RGR1P19263 1082 aa9.8□□□□□ -0.84
RRP17YDR412W TUM1Q08686 304 aaKnown RBP9.79□□□□□ -0.84
RRP17YDR412W DIT2P21595 489 aa9.78□□□□□ -0.84
RRP17YDR412W RPP1BP10622 106 aaKnown RBP9.77□□□□□ -0.85
RRP17YDR412W TFB4Q12004 338 aa9.77□□□□□ -0.85
RRP17YDR412W PEX21P50091 288 aa9.75□□□□□ -0.85
RRP17YDR412W STR2P47164 639 aa9.74□□□□□ -0.85
RRP17YDR412W YPR109WQ06104 294 aa9.74□□□□□ -0.85
RRP17YDR412W XDJ1P39102 459 aa9.72□□□□□ -0.85
RRP17YDR412W ISM1P48526 1002 aa9.72□□□□□ -0.85
RRP17YDR412W PSE1P32337 1089 aaKnown RBP9.7□□□□□ -0.86
RRP17YDR412W BUD20Q08004 166 aaPredicted RBP9.7□□□□□ -0.86
RRP17YDR412W NUD1P32336 851 aa9.69□□□□□ -0.86
RRP17YDR412W TY1A-DR4O74302 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-HP0C2I4 478 aaKnown RBP9.66□□□□□ -0.86
RRP17YDR412W TY1A-AP0CX57 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-PR1P0CX58 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-ORP0CX59 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-PR2P0CX60 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-DR5P0CX65 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-ER2P0CX66 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-GR3P0CX67 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-LR1P0CX68 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-MR2P0CX69 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-JR2P47099 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-DR1Q03856 440 aa9.66□□□□□ -0.86
RRP17YDR412W TY1A-ML1Q04706 440 aaKnown RBP9.66□□□□□ -0.86
RRP17YDR412W TY1A-BRQ12217 440 aa9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms