RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeastyeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAL1YDR348C MSB4Q12317 492 aa6.79□□□□□ -1.32
PAL1YDR348C THO2P53552 1597 aaKnown RBP6.79□□□□□ -1.32
PAL1YDR348C SPP41P38904 1435 aa6.78□□□□□ -1.32
PAL1YDR348C COQ8P27697 501 aa6.78□□□□□ -1.32
PAL1YDR348C EDS1P38073 919 aa6.78□□□□□ -1.32
PAL1YDR348C MON2P48563 1636 aaPredicted RBP6.78□□□□□ -1.32
PAL1YDR348C IOC2Q12072 812 aa6.77□□□□□ -1.33
PAL1YDR348C LDB19Q12502 818 aa6.76□□□□□ -1.33
PAL1YDR348C MYO2P19524 1574 aaKnown RBP6.76□□□□□ -1.33
PAL1YDR348C SSK2P53599 1579 aa6.76□□□□□ -1.33
PAL1YDR348C SIN3P22579 1536 aa6.76□□□□□ -1.33
PAL1YDR348C STU1P38198 1513 aa6.76□□□□□ -1.33
PAL1YDR348C IKI3Q06706 1349 aaKnown RBP6.76□□□□□ -1.33
PAL1YDR348C FKH1P40466 484 aa6.76□□□□□ -1.33
PAL1YDR348C EAP1P36041 632 aaKnown RBP6.75□□□□□ -1.33
PAL1YDR348C YPR148CQ06523 435 aa6.75□□□□□ -1.33
PAL1YDR348C SAM3Q08986 587 aa6.75□□□□□ -1.33
PAL1YDR348C AIR2Q12476 344 aaKnown RBP6.75□□□□□ -1.33
PAL1YDR348C MIF2P35201 549 aa6.73□□□□□ -1.33
PAL1YDR348C EBP2P36049 427 aaKnown RBP6.73□□□□□ -1.33
PAL1YDR348C CAB3P36076 571 aa6.73□□□□□ -1.33
PAL1YDR348C TRP5P00931 707 aaKnown RBP6.71□□□□□ -1.33
PAL1YDR348C STH1P32597 1359 aa6.71□□□□□ -1.34
PAL1YDR348C VPS70P47161 811 aa6.71□□□□□ -1.34
PAL1YDR348C TAF2P23255 1407 aa6.7□□□□□ -1.34
PAL1YDR348C BPT1P14772 1559 aa6.7□□□□□ -1.34
PAL1YDR348C POL1P13382 1468 aa6.69□□□□□ -1.34
PAL1YDR348C YJL171CP46992 396 aa6.69□□□□□ -1.34
PAL1YDR348C SSM4P40318 1319 aa6.69□□□□□ -1.34
PAL1YDR348C YTA7P40340 1379 aa6.68□□□□□ -1.34
PAL1YDR348C POL5P39985 1022 aaKnown RBP6.68□□□□□ -1.34
PAL1YDR348C NUP170P38181 1502 aa6.68□□□□□ -1.34
PAL1YDR348C PTC3P34221 468 aaKnown RBP6.67□□□□□ -1.34
PAL1YDR348C GYP5Q12344 894 aa6.67□□□□□ -1.34
PAL1YDR348C SCC2Q04002 1493 aa6.67□□□□□ -1.34
PAL1YDR348C SPT7P35177 1332 aa6.67□□□□□ -1.34
PAL1YDR348C RTG1P32607 177 aa6.66□□□□□ -1.34
PAL1YDR348C ESP1Q03018 1630 aa6.66□□□□□ -1.34
PAL1YDR348C IFH1P39520 1085 aa6.65□□□□□ -1.35
PAL1YDR348C NOP53Q12080 455 aaKnown RBP6.65□□□□□ -1.35
PAL1YDR348C YNL035CP53962 389 aaKnown RBP6.64□□□□□ -1.35
PAL1YDR348C ECM5Q03214 1411 aa6.64□□□□□ -1.35
PAL1YDR348C DCW1P36091 449 aa6.63□□□□□ -1.35
PAL1YDR348C ABP1P15891 592 aaKnown RBP6.62□□□□□ -1.35
PAL1YDR348C NCR1Q12200 1170 aa6.61□□□□□ -1.35
PAL1YDR348C BMT6Q12291 365 aa6.61□□□□□ -1.35
PAL1YDR348C SEC3P33332 1336 aaKnown RBP6.61□□□□□ -1.35
PAL1YDR348C HTA1P04911 132 aaKnown RBP6.6□□□□□ -1.35
PAL1YDR348C HTA2P04912 132 aa6.6□□□□□ -1.35
PAL1YDR348C LEU3P08638 886 aa6.6□□□□□ -1.35
PAL1YDR348C PRS1P32895 427 aaKnown RBP6.6□□□□□ -1.35
PAL1YDR348C SEC61P32915 480 aa6.6□□□□□ -1.35
PAL1YDR348C CKB1P43639 278 aa6.6□□□□□ -1.35
PAL1YDR348C PDR10P51533 1564 aa6.59□□□□□ -1.35
PAL1YDR348C GRE2Q12068 342 aaKnown RBP6.58□□□□□ -1.36
PAL1YDR348C MYO4P32492 1471 aa6.58□□□□□ -1.36
PAL1YDR348C JIP4Q03361 876 aa6.57□□□□□ -1.36
PAL1YDR348C DNA2P38859 1522 aa6.56□□□□□ -1.36
PAL1YDR348C RTT106P40161 455 aa6.56□□□□□ -1.36
PAL1YDR348C DAN4P47179 1161 aa6.56□□□□□ -1.36
PAL1YDR348C SPB4P25808 606 aaPredicted RBP6.55□□□□□ -1.36
PAL1YDR348C YEL023CP39992 682 aa6.55□□□□□ -1.36
PAL1YDR348C MLP2P40457 1679 aa6.55□□□□□ -1.36
PAL1YDR348C YOR1P53049 1477 aa6.55□□□□□ -1.36
PAL1YDR348C TFG1P41895 735 aaPredicted RBP6.55□□□□□ -1.36
PAL1YDR348C ATH1P48016 1211 aa6.55□□□□□ -1.36
PAL1YDR348C PAN1P32521 1480 aa6.54□□□□□ -1.36
PAL1YDR348C PBS2P08018 668 aa6.54□□□□□ -1.36
PAL1YDR348C PTC4P38089 393 aa6.54□□□□□ -1.36
PAL1YDR348C RKR1Q04781 1562 aa6.54□□□□□ -1.36
PAL1YDR348C TAF7Q05021 590 aa6.54□□□□□ -1.36
PAL1YDR348C SNQ2P32568 1501 aaKnown RBP6.54□□□□□ -1.36
PAL1YDR348C GUT1P32190 709 aa6.53□□□□□ -1.36
PAL1YDR348C SOL3P38858 249 aa6.53□□□□□ -1.36
PAL1YDR348C REF2P42073 533 aaPredicted RBP6.53□□□□□ -1.36
PAL1YDR348C YPK9Q12697 1472 aa6.53□□□□□ -1.36
PAL1YDR348C SWR1Q05471 1514 aa6.52□□□□□ -1.37
PAL1YDR348C DSF2P38213 736 aa6.52□□□□□ -1.37
PAL1YDR348C BUD4P47136 1447 aa6.52□□□□□ -1.37
PAL1YDR348C SMC4Q12267 1418 aa6.52□□□□□ -1.37
PAL1YDR348C LEO1P38439 464 aa6.51□□□□□ -1.37
PAL1YDR348C PEP1P32319 1579 aa6.51□□□□□ -1.37
PAL1YDR348C YCF1P39109 1515 aaKnown RBP6.51□□□□□ -1.37
PAL1YDR348C NST1P53935 1240 aa6.5□□□□□ -1.37
PAL1YDR348C UBP14P38237 781 aaKnown RBP6.49□□□□□ -1.37
PAL1YDR348C SAP30P38429 201 aa6.49□□□□□ -1.37
PAL1YDR348C VHR2P40041 505 aa6.49□□□□□ -1.37
PAL1YDR348C TSC11P40061 1430 aa6.49□□□□□ -1.37
PAL1YDR348C YGR273CP53329 174 aa6.48□□□□□ -1.37
PAL1YDR348C YDL129WQ07555 291 aa6.48□□□□□ -1.37
PAL1YDR348C SRB8P25648 1427 aa6.48□□□□□ -1.37
PAL1YDR348C CFT1Q06632 1357 aaKnown RBP6.47□□□□□ -1.37
PAL1YDR348C YDR090CQ03193 310 aa6.47□□□□□ -1.37
PAL1YDR348C YLR326WQ06170 240 aaKnown RBP6.47□□□□□ -1.37
PAL1YDR348C GEA1P47102 1408 aaPredicted RBP6.47□□□□□ -1.37
PAL1YDR348C KOG1P38873 1557 aa6.47□□□□□ -1.37
PAL1YDR348C PDR15Q04182 1529 aaKnown RBP6.47□□□□□ -1.37
PAL1YDR348C YLR419WQ06698 1435 aaKnown RBP6.45□□□□□ -1.38
PAL1YDR348C ILV3P39522 585 aaKnown RBP6.45□□□□□ -1.38
PAL1YDR348C ATG2P53855 1592 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms