RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeastyeast

Gene HTA1, Length 399 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTA1YDR225W YPR148CQ06523 435 aa5.56□□□□□ -1.52
HTA1YDR225W RTG1P32607 177 aa5.55□□□□□ -1.52
HTA1YDR225W DCW1P36091 449 aa5.55□□□□□ -1.52
HTA1YDR225W VPS70P47161 811 aa5.55□□□□□ -1.52
HTA1YDR225W COQ8P27697 501 aa5.54□□□□□ -1.52
HTA1YDR225W YJL171CP46992 396 aa5.54□□□□□ -1.52
HTA1YDR225W HTA1P04911 132 aaKnown RBP5.52□□□□□ -1.53
HTA1YDR225W HTA2P04912 132 aa5.52□□□□□ -1.53
HTA1YDR225W PTC3P34221 468 aaKnown RBP5.52□□□□□ -1.53
HTA1YDR225W YNL035CP53962 389 aaKnown RBP5.52□□□□□ -1.53
HTA1YDR225W GRE2Q12068 342 aaKnown RBP5.52□□□□□ -1.53
HTA1YDR225W RLF2Q12495 606 aa5.52□□□□□ -1.53
HTA1YDR225W ABP1P15891 592 aaKnown RBP5.51□□□□□ -1.53
HTA1YDR225W IFH1P39520 1085 aa5.51□□□□□ -1.53
HTA1YDR225W NCR1Q12200 1170 aa5.5□□□□□ -1.53
HTA1YDR225W SEC61P32915 480 aa5.49□□□□□ -1.53
HTA1YDR225W BMT6Q12291 365 aa5.49□□□□□ -1.53
HTA1YDR225W YEL023CP39992 682 aa5.48□□□□□ -1.53
HTA1YDR225W DAN4P47179 1161 aa5.48□□□□□ -1.53
HTA1YDR225W ATH1P48016 1211 aa5.48□□□□□ -1.53
HTA1YDR225W DSF2P38213 736 aa5.47□□□□□ -1.53
HTA1YDR225W JIP4Q03361 876 aa5.47□□□□□ -1.53
HTA1YDR225W GUT1P32190 709 aa5.45□□□□□ -1.54
HTA1YDR225W PTC4P38089 393 aa5.45□□□□□ -1.54
HTA1YDR225W PBS2P08018 668 aa5.44□□□□□ -1.54
HTA1YDR225W TFG1P41895 735 aaPredicted RBP5.44□□□□□ -1.54
HTA1YDR225W KIN1P13185 1064 aa5.43□□□□□ -1.54
HTA1YDR225W SOL3P38858 249 aa5.42□□□□□ -1.54
HTA1YDR225W YNR021WP53723 404 aaKnown RBP5.42□□□□□ -1.54
HTA1YDR225W NST1P53935 1240 aa5.42□□□□□ -1.54
HTA1YDR225W SAP30P38429 201 aa5.41□□□□□ -1.54
HTA1YDR225W YDL129WQ07555 291 aa5.4□□□□□ -1.54
HTA1YDR225W NOP53Q12080 455 aaKnown RBP5.39□□□□□ -1.55
HTA1YDR225W PML39Q03760 334 aa5.38□□□□□ -1.55
HTA1YDR225W ILV3P39522 585 aaKnown RBP5.36□□□□□ -1.55
HTA1YDR225W AIM7Q12156 149 aa5.36□□□□□ -1.55
HTA1YDR225W GLC3P32775 704 aa5.35□□□□□ -1.55
HTA1YDR225W HGH1P48362 394 aaKnown RBP5.35□□□□□ -1.55
HTA1YDR225W YGR273CP53329 174 aa5.35□□□□□ -1.55
HTA1YDR225W YDR344CQ05510 147 aa5.35□□□□□ -1.55
HTA1YDR225W MAM3Q12296 706 aa5.35□□□□□ -1.55
HTA1YDR225W MPH3P0CE00 602 aa5.34□□□□□ -1.55
HTA1YDR225W MID1P41821 548 aa5.34□□□□□ -1.55
HTA1YDR225W REF2P42073 533 aaPredicted RBP5.34□□□□□ -1.55
HTA1YDR225W AI4P03878 556 aa5.33□□□□□ -1.56
HTA1YDR225W DIT2P21595 489 aa5.33□□□□□ -1.56
HTA1YDR225W IES2P40154 320 aa5.32□□□□□ -1.56
HTA1YDR225W NUP42P49686 430 aaKnown RBP5.32□□□□□ -1.56
HTA1YDR225W GUA1P38625 525 aaKnown RBP5.31□□□□□ -1.56
HTA1YDR225W PRE3P38624 215 aa5.3□□□□□ -1.56
HTA1YDR225W CHL1P22516 861 aaPredicted RBP5.29□□□□□ -1.56
HTA1YDR225W MAK21Q12176 1025 aaKnown RBP5.28□□□□□ -1.56
HTA1YDR225W KEX1P09620 729 aa5.27□□□□□ -1.57
HTA1YDR225W ELP4Q02884 456 aaKnown RBP5.27□□□□□ -1.57
HTA1YDR225W PEX29Q03370 554 aa5.27□□□□□ -1.57
HTA1YDR225W COX6P00427 148 aa5.26□□□□□ -1.57
HTA1YDR225W SLI15P38283 698 aa5.26□□□□□ -1.57
HTA1YDR225W VHR2P40041 505 aa5.26□□□□□ -1.57
HTA1YDR225W ATF2P53296 535 aa5.26□□□□□ -1.57
HTA1YDR225W UBP14P38237 781 aaKnown RBP5.25□□□□□ -1.57
HTA1YDR225W ARH1P48360 493 aa5.25□□□□□ -1.57
HTA1YDR225W HPC2Q01448 625 aa5.25□□□□□ -1.57
HTA1YDR225W YLR326WQ06170 240 aaKnown RBP5.25□□□□□ -1.57
HTA1YDR225W MPC54Q08550 464 aa5.24□□□□□ -1.57
HTA1YDR225W BCK2P33306 851 aa5.22□□□□□ -1.57
HTA1YDR225W TFB3Q03290 321 aa5.21□□□□□ -1.58
HTA1YDR225W PCS60P38137 543 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
HTA1YDR225W HAP5Q02516 242 aa5.2□□□□□ -1.58
HTA1YDR225W RAD54P32863 898 aa5.19□□□□□ -1.58
HTA1YDR225W NMA111P53920 997 aa5.19□□□□□ -1.58
HTA1YDR225W DPL1Q05567 589 aa5.19□□□□□ -1.58
HTA1YDR225W CDC73Q06697 393 aa5.19□□□□□ -1.58
HTA1YDR225W SPT23P35210 1082 aa5.18□□□□□ -1.58
HTA1YDR225W VRP1P37370 817 aa5.18□□□□□ -1.58
HTA1YDR225W YDR090CQ03193 310 aa5.18□□□□□ -1.58
HTA1YDR225W PKC1P24583 1151 aa5.16□□□□□ -1.58
HTA1YDR225W BRL1P38770 471 aa5.16□□□□□ -1.58
HTA1YDR225W YML020WQ03722 664 aa5.16□□□□□ -1.58
HTA1YDR225W BNI4P53858 892 aa5.15□□□□□ -1.59
HTA1YDR225W SSA1P10591 642 aaKnown RBP5.14□□□□□ -1.59
HTA1YDR225W SSA2P10592 639 aaKnown RBP5.14□□□□□ -1.59
HTA1YDR225W SUB2Q07478 446 aaKnown RBP5.14□□□□□ -1.59
HTA1YDR225W NOP8Q08287 484 aaPredicted RBP5.14□□□□□ -1.59
HTA1YDR225W GEF1P37020 779 aa5.13□□□□□ -1.59
HTA1YDR225W KIC1P38692 1080 aa5.13□□□□□ -1.59
HTA1YDR225W PTC2P39966 464 aaKnown RBP5.13□□□□□ -1.59
HTA1YDR225W SLX8P40072 274 aa5.13□□□□□ -1.59
HTA1YDR225W CSN12P47130 423 aa5.13□□□□□ -1.59
HTA1YDR225W ISU2Q12056 156 aa5.13□□□□□ -1.59
HTA1YDR225W PSE1P32337 1089 aaKnown RBP5.12□□□□□ -1.59
HTA1YDR225W BIM1P40013 344 aa5.12□□□□□ -1.59
HTA1YDR225W GLN1P32288 370 aaKnown RBP5.11□□□□□ -1.59
HTA1YDR225W XDJ1P39102 459 aa5.11□□□□□ -1.59
HTA1YDR225W YJL007CP47080 104 aa5.1□□□□□ -1.59
HTA1YDR225W YML082WQ04533 649 aaKnown RBP5.1□□□□□ -1.59
HTA1YDR225W YPR015CQ12531 247 aa5.1□□□□□ -1.59
HTA1YDR225W PDR1P12383 1068 aa5.09□□□□□ -1.59
HTA1YDR225W RAM1P22007 431 aa5.09□□□□□ -1.59
HTA1YDR225W ATG32P40458 529 aa5.09□□□□□ -1.59
HTA1YDR225W RPP1BP10622 106 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms