RNA–Protein interactions for RNA: YDR105C

TMS1, Transcript of Vacuolar membrane protein of unknown function, yeastyeast

Gene TMS1, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TMS1YDR105C TY1B-BLQ12490 1755 aa11.8□□□□□ -0.52
TMS1YDR105C NTE1Q04958 1679 aa11.78□□□□□ -0.52
TMS1YDR105C GEA1P47102 1408 aaPredicted RBP11.78□□□□□ -0.52
TMS1YDR105C RPA190P10964 1664 aaKnown RBP11.77□□□□□ -0.53
TMS1YDR105C IKI3Q06706 1349 aaKnown RBP11.75□□□□□ -0.53
TMS1YDR105C DNF1P32660 1571 aa11.73□□□□□ -0.53
TMS1YDR105C RPO21P04050 1733 aaKnown RBP11.71□□□□□ -0.53
TMS1YDR105C SNT2P53127 1403 aa11.7□□□□□ -0.54
TMS1YDR105C RTT106P40161 455 aa11.69□□□□□ -0.54
TMS1YDR105C GEA2P39993 1459 aaKnown RBP11.66□□□□□ -0.54
TMS1YDR105C NUP170P38181 1502 aa11.64□□□□□ -0.55
TMS1YDR105C TY3B-GQ99315 1547 aa11.62□□□□□ -0.55
TMS1YDR105C NUP159P40477 1460 aa11.62□□□□□ -0.55
TMS1YDR105C YBT1P32386 1661 aa11.62□□□□□ -0.55
TMS1YDR105C IRC20Q06554 1556 aa11.6□□□□□ -0.55
TMS1YDR105C SSM4P40318 1319 aa11.57□□□□□ -0.56
TMS1YDR105C VPS15P22219 1454 aa11.57□□□□□ -0.56
TMS1YDR105C CAT8P39113 1433 aa11.55□□□□□ -0.56
TMS1YDR105C MET5P47169 1442 aa11.5□□□□□ -0.57
TMS1YDR105C YRF1-1P0CX20 1796 aa11.49□□□□□ -0.57
TMS1YDR105C YRF1-5P0CX21 1796 aa11.49□□□□□ -0.57
TMS1YDR105C YRF1-8P0CX22 1796 aa11.49□□□□□ -0.57
TMS1YDR105C SPO14P36126 1683 aa11.49□□□□□ -0.57
TMS1YDR105C GDB1Q06625 1536 aa11.47□□□□□ -0.57
TMS1YDR105C PDR12Q02785 1511 aa11.46□□□□□ -0.57
TMS1YDR105C PDR10P51533 1564 aa11.46□□□□□ -0.58
TMS1YDR105C MET10P39692 1035 aa11.45□□□□□ -0.58
TMS1YDR105C ARO1P08566 1588 aaKnown RBP11.45□□□□□ -0.58
TMS1YDR105C NUP157P40064 1391 aaKnown RBP11.43□□□□□ -0.58
TMS1YDR105C CKB1P43639 278 aa11.42□□□□□ -0.58
TMS1YDR105C SRB8P25648 1427 aa11.41□□□□□ -0.58
TMS1YDR105C BUD3P25558 1636 aa11.35□□□□□ -0.59
TMS1YDR105C IQG1Q12280 1495 aa11.31□□□□□ -0.6
TMS1YDR105C GCN2P15442 1659 aa11.29□□□□□ -0.6
TMS1YDR105C BUD21Q08492 214 aaPredicted RBP11.28□□□□□ -0.6
TMS1YDR105C MMS1Q06211 1407 aa11.26□□□□□ -0.61
TMS1YDR105C LTE1P07866 1435 aa11.25□□□□□ -0.61
TMS1YDR105C YSP2Q06681 1438 aa11.24□□□□□ -0.61
TMS1YDR105C BNR1P40450 1375 aa11.19□□□□□ -0.62
TMS1YDR105C DOP1Q03921 1698 aa11.18□□□□□ -0.62
TMS1YDR105C DRS2P39524 1355 aa11.17□□□□□ -0.62
TMS1YDR105C NOP7P53261 605 aaKnown RBP11.17□□□□□ -0.62
TMS1YDR105C CHC1P22137 1653 aaKnown RBP11.16□□□□□ -0.62
TMS1YDR105C TRM3Q07527 1436 aa11.15□□□□□ -0.62
TMS1YDR105C YOR093CQ12275 1648 aa11.14□□□□□ -0.63
TMS1YDR105C SEC7P11075 2009 aaKnown RBP11.13□□□□□ -0.63
TMS1YDR105C POL5P39985 1022 aaKnown RBP11.12□□□□□ -0.63
TMS1YDR105C PAF1P38351 445 aa11.11□□□□□ -0.63
TMS1YDR105C PDR5P33302 1511 aaKnown RBP11.06□□□□□ -0.64
TMS1YDR105C BFR2Q06631 534 aaKnown RBP11.01□□□□□ -0.65
TMS1YDR105C NUP188P52593 1655 aaKnown RBP11.01□□□□□ -0.65
TMS1YDR105C VMR1P38735 1592 aa11□□□□□ -0.65
TMS1YDR105C IML1P47170 1584 aa10.98□□□□□ -0.65
TMS1YDR105C DNF2Q12675 1612 aa10.97□□□□□ -0.65
TMS1YDR105C ITT1Q04638 464 aa10.97□□□□□ -0.65
TMS1YDR105C BNI1P41832 1953 aa10.96□□□□□ -0.65
TMS1YDR105C RAV1P47104 1357 aa10.93□□□□□ -0.66
TMS1YDR105C PDR11P40550 1411 aa10.9□□□□□ -0.67
TMS1YDR105C SEC3P33332 1336 aaKnown RBP10.88□□□□□ -0.67
TMS1YDR105C RTC1Q08281 1341 aa10.88□□□□□ -0.67
TMS1YDR105C ORC1P54784 914 aaPredicted RBP10.88□□□□□ -0.67
TMS1YDR105C URN1Q06525 465 aaKnown RBP10.87□□□□□ -0.67
TMS1YDR105C TAF5P38129 798 aa10.84□□□□□ -0.67
TMS1YDR105C MHP1P43638 1398 aa10.83□□□□□ -0.68
TMS1YDR105C TY3B-IQ7LHG5 1498 aaKnown RBP10.82□□□□□ -0.68
TMS1YDR105C SPT7P35177 1332 aa10.81□□□□□ -0.68
TMS1YDR105C NSR1P27476 414 aaKnown RBP RIP-Chip data10.8□□□□□ -0.68not detected
TMS1YDR105C ESL2P36168 1195 aa10.8□□□□□ -0.68
TMS1YDR105C NUP192P47054 1683 aa10.79□□□□□ -0.68
TMS1YDR105C ENP1P38333 483 aaKnown RBP10.79□□□□□ -0.68
TMS1YDR105C TYS1P36421 394 aaKnown RBP10.78□□□□□ -0.68
TMS1YDR105C IPL1P38991 367 aa10.78□□□□□ -0.68
TMS1YDR105C KIP3P53086 805 aaKnown RBP10.76□□□□□ -0.69
TMS1YDR105C YLR419WQ06698 1435 aaKnown RBP10.75□□□□□ -0.69
TMS1YDR105C LEU3P08638 886 aa10.74□□□□□ -0.69
TMS1YDR105C YAP3P38749 330 aa10.74□□□□□ -0.69
TMS1YDR105C SCT1P32784 759 aa10.73□□□□□ -0.69
TMS1YDR105C DNF3Q12674 1656 aa10.71□□□□□ -0.69
TMS1YDR105C PSD2P53037 1138 aaKnown RBP10.67□□□□□ -0.7
TMS1YDR105C PDS5Q04264 1277 aa10.67□□□□□ -0.7
TMS1YDR105C BCK1Q01389 1478 aa10.67□□□□□ -0.7
TMS1YDR105C SPE2P21182 396 aa10.67□□□□□ -0.7
TMS1YDR105C NAP1P25293 417 aaKnown RBP10.67□□□□□ -0.7
TMS1YDR105C RAD9P14737 1309 aa10.66□□□□□ -0.7
TMS1YDR105C TAF8Q03750 510 aa10.65□□□□□ -0.7
TMS1YDR105C HAP1P0CE41 1502 aa10.64□□□□□ -0.71
TMS1YDR105C ALD4P46367 519 aaKnown RBP10.64□□□□□ -0.71
TMS1YDR105C CAB1Q04430 367 aa10.62□□□□□ -0.71
TMS1YDR105C MRX12P47084 519 aa10.61□□□□□ -0.71
TMS1YDR105C ABP1P15891 592 aaKnown RBP10.59□□□□□ -0.71
TMS1YDR105C MLP1Q02455 1875 aaKnown RBP10.59□□□□□ -0.71
TMS1YDR105C KRE5P22023 1365 aa10.57□□□□□ -0.72
TMS1YDR105C CHZ1P40019 153 aaPredicted RBP10.55□□□□□ -0.72
TMS1YDR105C RIA1P53893 1110 aa10.54□□□□□ -0.72
TMS1YDR105C NOP2P40991 618 aaKnown RBP10.53□□□□□ -0.72
TMS1YDR105C MAK10Q02197 733 aa10.52□□□□□ -0.73
TMS1YDR105C RTG3P38165 486 aa10.51□□□□□ -0.73
TMS1YDR105C NST1P53935 1240 aa10.51□□□□□ -0.73
TMS1YDR105C CFT1Q06632 1357 aaKnown RBP10.47□□□□□ -0.73
TMS1YDR105C PRS1P32895 427 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms