RNA–Protein interactions for RNA: YDR044W

HEM13, Transcript of Coproporphyrinogen III oxidase, yeastyeast

Gene HEM13, Length 987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEM13YDR044W IFH1P39520 1085 aa13.37□□□□□ -0.27
HEM13YDR044W DNF1P32660 1571 aa13.35□□□□□ -0.27
HEM13YDR044W RPA190P10964 1664 aaKnown RBP13.32□□□□□ -0.28
HEM13YDR044W SNT2P53127 1403 aa13.3□□□□□ -0.28
HEM13YDR044W GEA1P47102 1408 aaPredicted RBP13.29□□□□□ -0.28
HEM13YDR044W IKI3Q06706 1349 aaKnown RBP13.24□□□□□ -0.29
HEM13YDR044W NTE1Q04958 1679 aa13.21□□□□□ -0.3
HEM13YDR044W TY3B-GQ99315 1547 aa13.2□□□□□ -0.3
HEM13YDR044W RPO21P04050 1733 aaKnown RBP13.2□□□□□ -0.3
HEM13YDR044W SSM4P40318 1319 aa13.16□□□□□ -0.3
HEM13YDR044W NUP170P38181 1502 aa13.15□□□□□ -0.3
HEM13YDR044W RTT106P40161 455 aa13.13□□□□□ -0.31
HEM13YDR044W NUP159P40477 1460 aa13.11□□□□□ -0.31
HEM13YDR044W YBT1P32386 1661 aa13.11□□□□□ -0.31
HEM13YDR044W IRC20Q06554 1556 aa13.11□□□□□ -0.31
HEM13YDR044W GEA2P39993 1459 aaKnown RBP13.1□□□□□ -0.31
HEM13YDR044W YRF1-1P0CX20 1796 aa13.09□□□□□ -0.31
HEM13YDR044W YRF1-5P0CX21 1796 aa13.09□□□□□ -0.31
HEM13YDR044W YRF1-8P0CX22 1796 aa13.09□□□□□ -0.31
HEM13YDR044W VPS15P22219 1454 aa13.07□□□□□ -0.32
HEM13YDR044W SPO14P36126 1683 aa12.99□□□□□ -0.33
HEM13YDR044W GDB1Q06625 1536 aa12.98□□□□□ -0.33
HEM13YDR044W CAT8P39113 1433 aa12.97□□□□□ -0.33
HEM13YDR044W MET5P47169 1442 aa12.96□□□□□ -0.33
HEM13YDR044W MET10P39692 1035 aa12.96□□□□□ -0.33
HEM13YDR044W PDR10P51533 1564 aa12.94□□□□□ -0.34
HEM13YDR044W PDR12Q02785 1511 aa12.93□□□□□ -0.34
HEM13YDR044W NUP157P40064 1391 aaKnown RBP12.91□□□□□ -0.34
HEM13YDR044W ARO1P08566 1588 aaKnown RBP12.9□□□□□ -0.34
HEM13YDR044W CKB1P43639 278 aa12.9□□□□□ -0.34
HEM13YDR044W BUD3P25558 1636 aa12.89□□□□□ -0.35
HEM13YDR044W SRB8P25648 1427 aa12.83□□□□□ -0.36
HEM13YDR044W YSP2Q06681 1438 aa12.78□□□□□ -0.36
HEM13YDR044W IQG1Q12280 1495 aa12.72□□□□□ -0.37
HEM13YDR044W BUD21Q08492 214 aaPredicted RBP12.71□□□□□ -0.37
HEM13YDR044W SEC7P11075 2009 aaKnown RBP12.67□□□□□ -0.38
HEM13YDR044W GCN2P15442 1659 aa12.67□□□□□ -0.38
HEM13YDR044W LTE1P07866 1435 aa12.63□□□□□ -0.39
HEM13YDR044W MMS1Q06211 1407 aa12.63□□□□□ -0.39
HEM13YDR044W BNR1P40450 1375 aa12.61□□□□□ -0.39
HEM13YDR044W DOP1Q03921 1698 aa12.54□□□□□ -0.4
HEM13YDR044W DRS2P39524 1355 aa12.53□□□□□ -0.4
HEM13YDR044W BNI1P41832 1953 aa12.52□□□□□ -0.4
HEM13YDR044W ITT1Q04638 464 aa12.51□□□□□ -0.41
HEM13YDR044W YOR093CQ12275 1648 aa12.51□□□□□ -0.41
HEM13YDR044W CHC1P22137 1653 aaKnown RBP12.5□□□□□ -0.41
HEM13YDR044W POL5P39985 1022 aaKnown RBP12.47□□□□□ -0.41
HEM13YDR044W NOP7P53261 605 aaKnown RBP12.46□□□□□ -0.41
HEM13YDR044W TRM3Q07527 1436 aa12.45□□□□□ -0.42
HEM13YDR044W PDR5P33302 1511 aaKnown RBP12.44□□□□□ -0.42
HEM13YDR044W PDR11P40550 1411 aa12.44□□□□□ -0.42
HEM13YDR044W VMR1P38735 1592 aa12.43□□□□□ -0.42
HEM13YDR044W PAF1P38351 445 aa12.4□□□□□ -0.42
HEM13YDR044W BFR2Q06631 534 aaKnown RBP12.39□□□□□ -0.43
HEM13YDR044W NUP188P52593 1655 aaKnown RBP12.38□□□□□ -0.43
HEM13YDR044W ORC1P54784 914 aaPredicted RBP12.36□□□□□ -0.43
HEM13YDR044W DNF2Q12675 1612 aa12.34□□□□□ -0.43
HEM13YDR044W IML1P47170 1584 aa12.33□□□□□ -0.44
HEM13YDR044W RAV1P47104 1357 aa12.32□□□□□ -0.44
HEM13YDR044W NSR1P27476 414 aaKnown RBP RIP-Chip data12.3□□□□□ -0.44not detected
HEM13YDR044W TYS1P36421 394 aaKnown RBP12.29□□□□□ -0.44
HEM13YDR044W RTC1Q08281 1341 aa12.29□□□□□ -0.44
HEM13YDR044W TAF5P38129 798 aa12.26□□□□□ -0.45
HEM13YDR044W NUP192P47054 1683 aa12.26□□□□□ -0.45
HEM13YDR044W SPT7P35177 1332 aa12.23□□□□□ -0.45
HEM13YDR044W IPL1P38991 367 aa12.23□□□□□ -0.45
HEM13YDR044W TY3B-IQ7LHG5 1498 aaKnown RBP12.21□□□□□ -0.46
HEM13YDR044W URN1Q06525 465 aaKnown RBP12.16□□□□□ -0.46
HEM13YDR044W ESL2P36168 1195 aa12.15□□□□□ -0.46
HEM13YDR044W YAP3P38749 330 aa12.14□□□□□ -0.47
HEM13YDR044W KIP3P53086 805 aaKnown RBP12.14□□□□□ -0.47
HEM13YDR044W MHP1P43638 1398 aa12.13□□□□□ -0.47
HEM13YDR044W PSD2P53037 1138 aaKnown RBP12.11□□□□□ -0.47
HEM13YDR044W SEC3P33332 1336 aaKnown RBP12.11□□□□□ -0.47
HEM13YDR044W LEU3P08638 886 aa12.1□□□□□ -0.47
HEM13YDR044W YLR419WQ06698 1435 aaKnown RBP12.1□□□□□ -0.47
HEM13YDR044W ENP1P38333 483 aaKnown RBP12.09□□□□□ -0.47
HEM13YDR044W RAD9P14737 1309 aa12.09□□□□□ -0.47
HEM13YDR044W ALD4P46367 519 aaKnown RBP12.06□□□□□ -0.48
HEM13YDR044W PDS5Q04264 1277 aa12.05□□□□□ -0.48
HEM13YDR044W SPE2P21182 396 aa12.04□□□□□ -0.48
HEM13YDR044W DNF3Q12674 1656 aa12.03□□□□□ -0.48
HEM13YDR044W NST1P53935 1240 aa12.03□□□□□ -0.48
HEM13YDR044W TAF8Q03750 510 aa12.03□□□□□ -0.48
HEM13YDR044W CAB1Q04430 367 aa12.03□□□□□ -0.48
HEM13YDR044W BCK1Q01389 1478 aa12.02□□□□□ -0.48
HEM13YDR044W ABP1P15891 592 aaKnown RBP11.95□□□□□ -0.5
HEM13YDR044W HAP1P0CE41 1502 aa11.95□□□□□ -0.5
HEM13YDR044W KRE5P22023 1365 aa11.94□□□□□ -0.5
HEM13YDR044W MLP1Q02455 1875 aaKnown RBP11.94□□□□□ -0.5
HEM13YDR044W RTG3P38165 486 aa11.93□□□□□ -0.5
HEM13YDR044W CHZ1P40019 153 aaPredicted RBP11.92□□□□□ -0.5
HEM13YDR044W MRX12P47084 519 aa11.9□□□□□ -0.5
HEM13YDR044W MAK10Q02197 733 aa11.9□□□□□ -0.5
HEM13YDR044W RIA1P53893 1110 aa11.89□□□□□ -0.51
HEM13YDR044W PRS1P32895 427 aaKnown RBP11.88□□□□□ -0.51
HEM13YDR044W FKH1P40466 484 aa11.86□□□□□ -0.51
HEM13YDR044W CFT1Q06632 1357 aaKnown RBP11.83□□□□□ -0.52
HEM13YDR044W USO1P25386 1790 aa11.83□□□□□ -0.52
HEM13YDR044W NAP1P25293 417 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms