RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	YDL129W	Q07555	291 aa		4.3	□□□□□ -1.72
YDL196W	YDL196W	YEL023C	P39992	682 aa		4.29	□□□□□ -1.72
YDL196W	YDL196W	CHL1	P22516	861 aa	Predicted RBP	4.27	□□□□□ -1.73
YDL196W	YDL196W	GRE2	Q12068	342 aa	Known RBP	4.27	□□□□□ -1.73
YDL196W	YDL196W	MAK11	P20484	414 aa	Known RBP	4.26	□□□□□ -1.73
YDL196W	YDL196W	MIF2	P35201	549 aa		4.25	□□□□□ -1.73
YDL196W	YDL196W	PRE3	P38624	215 aa		4.25	□□□□□ -1.73
YDL196W	YDL196W	RAM2	P29703	316 aa		4.24	□□□□□ -1.73
YDL196W	YDL196W	BCK2	P33306	851 aa		4.24	□□□□□ -1.73
YDL196W	YDL196W	GUT1	P32190	709 aa		4.23	□□□□□ -1.73
YDL196W	YDL196W	ATH1	P48016	1211 aa		4.23	□□□□□ -1.73
YDL196W	YDL196W	PTC3	P34221	468 aa	Known RBP	4.22	□□□□□ -1.73
YDL196W	YDL196W	EDS1	P38073	919 aa		4.22	□□□□□ -1.73
YDL196W	YDL196W	PML39	Q03760	334 aa		4.21	□□□□□ -1.74
YDL196W	YDL196W	COQ8	P27697	501 aa		4.2	□□□□□ -1.74
YDL196W	YDL196W	ELP4	Q02884	456 aa	Known RBP	4.18	□□□□□ -1.74
YDL196W	YDL196W	NST1	P53935	1240 aa		4.17	□□□□□ -1.74
YDL196W	YDL196W	VRP1	P37370	817 aa		4.16	□□□□□ -1.74
YDL196W	YDL196W	NOP53	Q12080	455 aa	Known RBP	4.16	□□□□□ -1.74
YDL196W	YDL196W	SOL3	P38858	249 aa		4.15	□□□□□ -1.75
YDL196W	YDL196W	XDJ1	P39102	459 aa		4.15	□□□□□ -1.75
YDL196W	YDL196W	ARH1	P48360	493 aa		4.15	□□□□□ -1.75
YDL196W	YDL196W	YDR344C	Q05510	147 aa		4.15	□□□□□ -1.75
YDL196W	YDL196W	AI4	P03878	556 aa		4.14	□□□□□ -1.75
YDL196W	YDL196W	MPH3	P0CE00	602 aa		4.14	□□□□□ -1.75
YDL196W	YDL196W	MID1	P41821	548 aa		4.14	□□□□□ -1.75
YDL196W	YDL196W	PEX29	Q03370	554 aa		4.13	□□□□□ -1.75
YDL196W	YDL196W	SPT23	P35210	1082 aa		4.11	□□□□□ -1.75
YDL196W	YDL196W	ILV3	P39522	585 aa	Known RBP	4.1	□□□□□ -1.75
YDL196W	YDL196W	YGR273C	P53329	174 aa		4.1	□□□□□ -1.75
YDL196W	YDL196W	HAP5	Q02516	242 aa		4.09	□□□□□ -1.75
YDL196W	YDL196W	BNI4	P53858	892 aa		4.06	□□□□□ -1.76
YDL196W	YDL196W	MPC54	Q08550	464 aa		4.06	□□□□□ -1.76
YDL196W	YDL196W	DPS1	P04802	557 aa	Known RBP	4.05	□□□□□ -1.76
YDL196W	YDL196W	YML082W	Q04533	649 aa	Known RBP	4.05	□□□□□ -1.76
YDL196W	YDL196W	SLI15	P38283	698 aa		4.04	□□□□□ -1.76
YDL196W	YDL196W	PTC2	P39966	464 aa	Known RBP	4.04	□□□□□ -1.76
YDL196W	YDL196W	NMA111	P53920	997 aa		4.04	□□□□□ -1.76
YDL196W	YDL196W	DPL1	Q05567	589 aa		4.03	□□□□□ -1.76
YDL196W	YDL196W	KEX1	P09620	729 aa		4.01	□□□□□ -1.77
YDL196W	YDL196W	SET1	P38827	1080 aa	Known RBP	4.01	□□□□□ -1.77
YDL196W	YDL196W	ISU2	Q12056	156 aa		3.99	□□□□□ -1.77
YDL196W	YDL196W	UBP14	P38237	781 aa	Known RBP	3.97	□□□□□ -1.77
YDL196W	YDL196W	CDC73	Q06697	393 aa		3.97	□□□□□ -1.77
YDL196W	YDL196W	VHR2	P40041	505 aa		3.96	□□□□□ -1.78
YDL196W	YDL196W	YLR326W	Q06170	240 aa	Known RBP	3.96	□□□□□ -1.78
YDL196W	YDL196W	YPR015C	Q12531	247 aa		3.95	□□□□□ -1.78
YDL196W	YDL196W	RPP1B	P10622	106 aa	Known RBP	3.94	□□□□□ -1.78
YDL196W	YDL196W	RAM1	P22007	431 aa		3.94	□□□□□ -1.78
YDL196W	YDL196W	RAD54	P32863	898 aa		3.94	□□□□□ -1.78
YDL196W	YDL196W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
YDL196W	YDL196W	SRC1	Q03707	834 aa		3.93	□□□□□ -1.78
YDL196W	YDL196W	GYP1	Q08484	637 aa		3.93	□□□□□ -1.78
YDL196W	YDL196W	IFH1	P39520	1085 aa		3.92	□□□□□ -1.78
YDL196W	YDL196W	RAS1	P01119	309 aa		3.91	□□□□□ -1.78
YDL196W	YDL196W	PDR1	P12383	1068 aa		3.91	□□□□□ -1.78
YDL196W	YDL196W	SAS4	Q04003	481 aa		3.91	□□□□□ -1.78
YDL196W	YDL196W	KIC1	P38692	1080 aa		3.89	□□□□□ -1.79
YDL196W	YDL196W	YDR090C	Q03193	310 aa		3.89	□□□□□ -1.79
YDL196W	YDL196W	AMS1	P22855	1083 aa		3.88	□□□□□ -1.79
YDL196W	YDL196W	REF2	P42073	533 aa	Predicted RBP	3.87	□□□□□ -1.79
YDL196W	YDL196W	PEX21	P50091	288 aa		3.87	□□□□□ -1.79
YDL196W	YDL196W	RGA2	Q06407	1009 aa		3.87	□□□□□ -1.79
YDL196W	YDL196W	CSC1	Q06538	782 aa		3.86	□□□□□ -1.79
YDL196W	YDL196W	YRR1	Q12172	810 aa		3.86	□□□□□ -1.79
YDL196W	YDL196W	TRK1	P12685	1235 aa		3.85	□□□□□ -1.79
YDL196W	YDL196W	GAP1	P19145	602 aa	Predicted RBP	3.85	□□□□□ -1.79
YDL196W	YDL196W	SDH2	P21801	266 aa		3.85	□□□□□ -1.79
YDL196W	YDL196W	MRF1	P30775	413 aa	Predicted RBP	3.85	□□□□□ -1.79
YDL196W	YDL196W	YPR148C	Q06523	435 aa		3.85	□□□□□ -1.79
YDL196W	YDL196W	TFB4	Q12004	338 aa		3.85	□□□□□ -1.79
YDL196W	YDL196W	PRT1	P06103	763 aa	Known RBP	3.84	□□□□□ -1.79
YDL196W	YDL196W	BUD20	Q08004	166 aa	Predicted RBP	3.84	□□□□□ -1.79
YDL196W	YDL196W	YEL077C	Q3E7X8	1277 aa		3.84	□□□□□ -1.79
YDL196W	YDL196W	TUM1	Q08686	304 aa	Known RBP	3.83	□□□□□ -1.8
YDL196W	YDL196W	STR2	P47164	639 aa		3.82	□□□□□ -1.8
YDL196W	YDL196W	NUD1	P32336	851 aa		3.81	□□□□□ -1.8
YDL196W	YDL196W	NPL4	P33755	580 aa		3.81	□□□□□ -1.8
YDL196W	YDL196W	ORC6	P38826	435 aa		3.81	□□□□□ -1.8
YDL196W	YDL196W	VPS70	P47161	811 aa		3.81	□□□□□ -1.8
YDL196W	YDL196W	ISM1	P48526	1002 aa		3.81	□□□□□ -1.8
YDL196W	YDL196W	MAK21	Q12176	1025 aa	Known RBP	3.81	□□□□□ -1.8
YDL196W	YDL196W	COX6	P00427	148 aa		3.8	□□□□□ -1.8
YDL196W	YDL196W	ERG12	P07277	443 aa		3.8	□□□□□ -1.8
YDL196W	YDL196W	RGA1	P39083	1007 aa		3.79	□□□□□ -1.8
YDL196W	YDL196W	GCD11	P32481	527 aa	Known RBP	3.78	□□□□□ -1.8
YDL196W	YDL196W	MVP1	P40959	511 aa	Known RBP	3.78	□□□□□ -1.8
YDL196W	YDL196W	SPT16	P32558	1035 aa	Known RBP	3.77	□□□□□ -1.81
YDL196W	YDL196W	TY1A-DR4	O74302	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-H	P0C2I4	478 aa	Known RBP	3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-A	P0CX57	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-PR1	P0CX58	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-OR	P0CX59	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-PR2	P0CX60	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-DR5	P0CX65	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-ER2	P0CX66	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-GR3	P0CX67	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-LR1	P0CX68	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	TY1A-MR2	P0CX69	440 aa		3.75	□□□□□ -1.81
YDL196W	YDL196W	SEC2	P17065	759 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms