RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C HTA2P04912 132 aa6.88□□□□□ -1.31
PBP4YDL053C ULI1P43604 169 aa6.88□□□□□ -1.31
PBP4YDL053C TRP5P00931 707 aaKnown RBP6.87□□□□□ -1.31
PBP4YDL053C SOL3P38858 249 aa6.85□□□□□ -1.31
PBP4YDL053C IOC2Q12072 812 aa6.84□□□□□ -1.31
PBP4YDL053C CKB1P43639 278 aa6.83□□□□□ -1.32
PBP4YDL053C YGR273CP53329 174 aa6.82□□□□□ -1.32
PBP4YDL053C YEL023CP39992 682 aa6.81□□□□□ -1.32
PBP4YDL053C NST1P53935 1240 aa6.81□□□□□ -1.32
PBP4YDL053C REF2P42073 533 aaPredicted RBP6.8□□□□□ -1.32
PBP4YDL053C LDB19Q12502 818 aa6.8□□□□□ -1.32
PBP4YDL053C VHR2P40041 505 aa6.78□□□□□ -1.32
PBP4YDL053C JIP4Q03361 876 aa6.77□□□□□ -1.33
PBP4YDL053C PTC4P38089 393 aa6.76□□□□□ -1.33
PBP4YDL053C UBP14P38237 781 aaKnown RBP6.76□□□□□ -1.33
PBP4YDL053C YNL035CP53962 389 aaKnown RBP6.76□□□□□ -1.33
PBP4YDL053C YLR326WQ06170 240 aaKnown RBP6.76□□□□□ -1.33
PBP4YDL053C AI4P03878 556 aa6.75□□□□□ -1.33
PBP4YDL053C PBS2P08018 668 aa6.75□□□□□ -1.33
PBP4YDL053C MPH3P0CE00 602 aa6.75□□□□□ -1.33
PBP4YDL053C RTG1P32607 177 aa6.75□□□□□ -1.33
PBP4YDL053C ILV3P39522 585 aaKnown RBP6.75□□□□□ -1.33
PBP4YDL053C DAN4P47179 1161 aa6.75□□□□□ -1.33
PBP4YDL053C KEX1P09620 729 aa6.74□□□□□ -1.33
PBP4YDL053C SPB4P25808 606 aaPredicted RBP6.73□□□□□ -1.33
PBP4YDL053C FKH1P40466 484 aa6.73□□□□□ -1.33
PBP4YDL053C YJL171CP46992 396 aa6.73□□□□□ -1.33
PBP4YDL053C YDR090CQ03193 310 aa6.72□□□□□ -1.33
PBP4YDL053C SEC61P32915 480 aa6.71□□□□□ -1.34
PBP4YDL053C DSF2P38213 736 aa6.71□□□□□ -1.34
PBP4YDL053C MAK21Q12176 1025 aaKnown RBP6.71□□□□□ -1.34
PBP4YDL053C COX6P00427 148 aa6.69□□□□□ -1.34
PBP4YDL053C RAD54P32863 898 aa6.69□□□□□ -1.34
PBP4YDL053C PCS60P38137 543 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
PBP4YDL053C AIR2Q12476 344 aaKnown RBP6.68□□□□□ -1.34
PBP4YDL053C LEU3P08638 886 aa6.67□□□□□ -1.34
PBP4YDL053C KIC1P38692 1080 aa6.67□□□□□ -1.34
PBP4YDL053C NCR1Q12200 1170 aa6.67□□□□□ -1.34
PBP4YDL053C MAM3Q12296 706 aa6.67□□□□□ -1.34
PBP4YDL053C SLI15P38283 698 aa6.65□□□□□ -1.34
PBP4YDL053C PML39Q03760 334 aa6.65□□□□□ -1.34
PBP4YDL053C IES2P40154 320 aa6.64□□□□□ -1.35
PBP4YDL053C TFG1P41895 735 aaPredicted RBP6.64□□□□□ -1.35
PBP4YDL053C MID1P41821 548 aa6.63□□□□□ -1.35
PBP4YDL053C YDL129WQ07555 291 aa6.63□□□□□ -1.35
PBP4YDL053C NUP42P49686 430 aaKnown RBP6.59□□□□□ -1.35
PBP4YDL053C SAP30P38429 201 aa6.58□□□□□ -1.36
PBP4YDL053C ORC6P38826 435 aa6.57□□□□□ -1.36
PBP4YDL053C PEX29Q03370 554 aa6.57□□□□□ -1.36
PBP4YDL053C CDC73Q06697 393 aa6.57□□□□□ -1.36
PBP4YDL053C DIT2P21595 489 aa6.56□□□□□ -1.36
PBP4YDL053C MPC54Q08550 464 aa6.56□□□□□ -1.36
PBP4YDL053C BMT6Q12291 365 aa6.56□□□□□ -1.36
PBP4YDL053C RPP1BP10622 106 aaKnown RBP6.54□□□□□ -1.36
PBP4YDL053C DPL1Q05567 589 aa6.54□□□□□ -1.36
PBP4YDL053C YNR021WP53723 404 aaKnown RBP6.53□□□□□ -1.36
PBP4YDL053C GAP1P19145 602 aaPredicted RBP6.52□□□□□ -1.37
PBP4YDL053C YDR344CQ05510 147 aa6.52□□□□□ -1.37
PBP4YDL053C PSE1P32337 1089 aaKnown RBP6.51□□□□□ -1.37
PBP4YDL053C RPN1P38764 993 aaKnown RBP6.51□□□□□ -1.37
PBP4YDL053C GLC3P32775 704 aa6.5□□□□□ -1.37
PBP4YDL053C CSC1Q06538 782 aa6.5□□□□□ -1.37
PBP4YDL053C ARH1P48360 493 aa6.49□□□□□ -1.37
PBP4YDL053C NMA111P53920 997 aa6.49□□□□□ -1.37
PBP4YDL053C MVP1P40959 511 aaKnown RBP6.48□□□□□ -1.37
PBP4YDL053C ISU2Q12056 156 aa6.48□□□□□ -1.37
PBP4YDL053C RGR1P19263 1082 aa6.47□□□□□ -1.37
PBP4YDL053C LEO1P38439 464 aa6.47□□□□□ -1.37
PBP4YDL053C HAP5Q02516 242 aa6.47□□□□□ -1.37
PBP4YDL053C ELP4Q02884 456 aaKnown RBP6.47□□□□□ -1.37
PBP4YDL053C TFB4Q12004 338 aa6.47□□□□□ -1.37
PBP4YDL053C PEX21P50091 288 aa6.46□□□□□ -1.38
PBP4YDL053C PRE3P38624 215 aa6.45□□□□□ -1.38
PBP4YDL053C AIM7Q12156 149 aa6.44□□□□□ -1.38
PBP4YDL053C ATF2P53296 535 aa6.43□□□□□ -1.38
PBP4YDL053C YPR109WQ06104 294 aa6.43□□□□□ -1.38
PBP4YDL053C TUM1Q08686 304 aaKnown RBP6.43□□□□□ -1.38
PBP4YDL053C YRR1Q12172 810 aa6.43□□□□□ -1.38
PBP4YDL053C CHL1P22516 861 aaPredicted RBP6.42□□□□□ -1.38
PBP4YDL053C BNI4P53858 892 aa6.42□□□□□ -1.38
PBP4YDL053C CLB5P30283 435 aa6.41□□□□□ -1.38
PBP4YDL053C SPT23P35210 1082 aa6.41□□□□□ -1.38
PBP4YDL053C KIN1P13185 1064 aa6.4□□□□□ -1.38
PBP4YDL053C TEA1P47988 759 aa6.4□□□□□ -1.38
PBP4YDL053C PDR1P12383 1068 aa6.39□□□□□ -1.39
PBP4YDL053C PTC2P39966 464 aaKnown RBP6.37□□□□□ -1.39
PBP4YDL053C RAM1P22007 431 aa6.36□□□□□ -1.39
PBP4YDL053C NUD1P32336 851 aa6.35□□□□□ -1.39
PBP4YDL053C NIS1P53939 407 aa6.34□□□□□ -1.39
PBP4YDL053C YPR015CQ12531 247 aa6.34□□□□□ -1.39
PBP4YDL053C RGA1P39083 1007 aa6.33□□□□□ -1.4
PBP4YDL053C YML082WQ04533 649 aaKnown RBP6.33□□□□□ -1.4
PBP4YDL053C STR2P47164 639 aa6.32□□□□□ -1.4
PBP4YDL053C ISM1P48526 1002 aa6.31□□□□□ -1.4
PBP4YDL053C SIT4P20604 311 aa6.3□□□□□ -1.4
PBP4YDL053C FPK1P53739 893 aa6.3□□□□□ -1.4
PBP4YDL053C YMR196WQ04336 1088 aa6.3□□□□□ -1.4
PBP4YDL053C NPL4P33755 580 aa6.29□□□□□ -1.4
PBP4YDL053C KEX2P13134 814 aa6.28□□□□□ -1.4
PBP4YDL053C BUD20Q08004 166 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms