RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W STS1P38637 319 aa4.88□□□□□ -1.63
SPB1YCL054W BCK2P33306 851 aa4.87□□□□□ -1.63
SPB1YCL054W DCW1P36091 449 aa4.86□□□□□ -1.63
SPB1YCL054W CHL1P22516 861 aaPredicted RBP4.86□□□□□ -1.63
SPB1YCL054W PTC4P38089 393 aa4.82□□□□□ -1.64
SPB1YCL054W PRE3P38624 215 aa4.82□□□□□ -1.64
SPB1YCL054W YEL023CP39992 682 aa4.81□□□□□ -1.64
SPB1YCL054W GRE2Q12068 342 aaKnown RBP4.81□□□□□ -1.64
SPB1YCL054W SAS10Q12136 610 aaPredicted RBP4.81□□□□□ -1.64
SPB1YCL054W DAN4P47179 1161 aa4.8□□□□□ -1.64
SPB1YCL054W ELP4Q02884 456 aaKnown RBP4.79□□□□□ -1.64
SPB1YCL054W ATH1P48016 1211 aa4.78□□□□□ -1.64
SPB1YCL054W RCR1P38212 213 aa4.78□□□□□ -1.64
SPB1YCL054W MIF2P35201 549 aa4.77□□□□□ -1.65
SPB1YCL054W PEX29Q03370 554 aa4.76□□□□□ -1.65
SPB1YCL054W LEU3P08638 886 aa4.75□□□□□ -1.65
SPB1YCL054W GUT1P32190 709 aa4.73□□□□□ -1.65
SPB1YCL054W VRP1P37370 817 aa4.73□□□□□ -1.65
SPB1YCL054W PML39Q03760 334 aa4.73□□□□□ -1.65
SPB1YCL054W XDJ1P39102 459 aa4.72□□□□□ -1.65
SPB1YCL054W MAK11P20484 414 aaKnown RBP4.71□□□□□ -1.66
SPB1YCL054W PTC3P34221 468 aaKnown RBP4.68□□□□□ -1.66
SPB1YCL054W SPT23P35210 1082 aa4.67□□□□□ -1.66
SPB1YCL054W ARH1P48360 493 aa4.67□□□□□ -1.66
SPB1YCL054W DPS1P04802 557 aaKnown RBP4.66□□□□□ -1.66
SPB1YCL054W COQ8P27697 501 aa4.63□□□□□ -1.67
SPB1YCL054W AI4P03878 556 aa4.62□□□□□ -1.67
SPB1YCL054W RAM2P29703 316 aa4.62□□□□□ -1.67
SPB1YCL054W EDS1P38073 919 aa4.62□□□□□ -1.67
SPB1YCL054W HAP5Q02516 242 aa4.62□□□□□ -1.67
SPB1YCL054W MPH3P0CE00 602 aa4.61□□□□□ -1.67
SPB1YCL054W PTC2P39966 464 aaKnown RBP4.61□□□□□ -1.67
SPB1YCL054W NOP53Q12080 455 aaKnown RBP4.61□□□□□ -1.67
SPB1YCL054W MID1P41821 548 aa4.6□□□□□ -1.67
SPB1YCL054W BNI4P53858 892 aa4.58□□□□□ -1.68
SPB1YCL054W DMA2P53924 522 aa4.58□□□□□ -1.68
SPB1YCL054W RPN1P38764 993 aaKnown RBP4.54□□□□□ -1.68
SPB1YCL054W RPP1BP10622 106 aaKnown RBP4.54□□□□□ -1.68
SPB1YCL054W YGR273CP53329 174 aa4.54□□□□□ -1.68
SPB1YCL054W YDR344CQ05510 147 aa4.54□□□□□ -1.68
SPB1YCL054W YML082WQ04533 649 aaKnown RBP4.53□□□□□ -1.68
SPB1YCL054W YPR148CQ06523 435 aa4.52□□□□□ -1.69
SPB1YCL054W MPC54Q08550 464 aa4.52□□□□□ -1.69
SPB1YCL054W SOL3P38858 249 aa4.51□□□□□ -1.69
SPB1YCL054W DPL1Q05567 589 aa4.51□□□□□ -1.69
SPB1YCL054W NMA111P53920 997 aa4.51□□□□□ -1.69
SPB1YCL054W NST1P53935 1240 aa4.51□□□□□ -1.69
SPB1YCL054W SET1P38827 1080 aaKnown RBP4.49□□□□□ -1.69
SPB1YCL054W GYP1Q08484 637 aa4.49□□□□□ -1.69
SPB1YCL054W ISU2Q12056 156 aa4.48□□□□□ -1.69
SPB1YCL054W ILV3P39522 585 aaKnown RBP4.48□□□□□ -1.69
SPB1YCL054W SLI15P38283 698 aa4.46□□□□□ -1.69
SPB1YCL054W VPS70P47161 811 aa4.45□□□□□ -1.7
SPB1YCL054W CKB1P43639 278 aa4.45□□□□□ -1.7
SPB1YCL054W YEL077CQ3E7X8 1277 aa4.44□□□□□ -1.7
SPB1YCL054W SPB4P25808 606 aaPredicted RBP4.44□□□□□ -1.7
SPB1YCL054W IFH1P39520 1085 aa4.44□□□□□ -1.7
SPB1YCL054W SAS4Q04003 481 aa4.43□□□□□ -1.7
SPB1YCL054W KEX1P09620 729 aa4.43□□□□□ -1.7
SPB1YCL054W DSF2P38213 736 aa4.43□□□□□ -1.7
SPB1YCL054W KIC1P38692 1080 aa4.42□□□□□ -1.7
SPB1YCL054W TRK1P12685 1235 aa4.42□□□□□ -1.7
SPB1YCL054W RAD54P32863 898 aa4.41□□□□□ -1.7
SPB1YCL054W PEX21P50091 288 aa4.41□□□□□ -1.7
SPB1YCL054W RLF2Q12495 606 aa4.41□□□□□ -1.7
SPB1YCL054W AMS1P22855 1083 aa4.41□□□□□ -1.7
SPB1YCL054W MRF1P30775 413 aaPredicted RBP4.41□□□□□ -1.7
SPB1YCL054W SRC1Q03707 834 aa4.38□□□□□ -1.71
SPB1YCL054W CDC73Q06697 393 aa4.38□□□□□ -1.71
SPB1YCL054W VHR2P40041 505 aa4.38□□□□□ -1.71
SPB1YCL054W PBS2P08018 668 aa4.37□□□□□ -1.71
SPB1YCL054W RAS1P01119 309 aa4.37□□□□□ -1.71
SPB1YCL054W KIN1P13185 1064 aa4.36□□□□□ -1.71
SPB1YCL054W GBP2P25555 427 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71 RIP-Chip
SPB1YCL054W NPL4P33755 580 aa4.35□□□□□ -1.71
SPB1YCL054W YNR021WP53723 404 aaKnown RBP4.35□□□□□ -1.71
SPB1YCL054W INO80P53115 1489 aa4.35□□□□□ -1.71
SPB1YCL054W ERG12P07277 443 aa4.34□□□□□ -1.71
SPB1YCL054W NUP42P49686 430 aaKnown RBP4.34□□□□□ -1.71
SPB1YCL054W YLR326WQ06170 240 aaKnown RBP4.34□□□□□ -1.71
SPB1YCL054W YPR015CQ12531 247 aa4.34□□□□□ -1.72
SPB1YCL054W RGA1P39083 1007 aa4.33□□□□□ -1.72
SPB1YCL054W GCR2Q01722 534 aa4.33□□□□□ -1.72
SPB1YCL054W MON2P48563 1636 aaPredicted RBP4.33□□□□□ -1.72
SPB1YCL054W DIT2P21595 489 aa4.33□□□□□ -1.72
SPB1YCL054W GLC3P32775 704 aa4.33□□□□□ -1.72
SPB1YCL054W RAM1P22007 431 aa4.32□□□□□ -1.72
SPB1YCL054W PDR1P12383 1068 aa4.32□□□□□ -1.72
SPB1YCL054W AIM7Q12156 149 aa4.32□□□□□ -1.72
SPB1YCL054W PRT1P06103 763 aaKnown RBP4.31□□□□□ -1.72
SPB1YCL054W GUA1P38625 525 aaKnown RBP4.31□□□□□ -1.72
SPB1YCL054W UBP14P38237 781 aaKnown RBP4.31□□□□□ -1.72
SPB1YCL054W CSC1Q06538 782 aa4.31□□□□□ -1.72
SPB1YCL054W TFB4Q12004 338 aa4.31□□□□□ -1.72
SPB1YCL054W YRR1Q12172 810 aa4.31□□□□□ -1.72
SPB1YCL054W PCS60P38137 543 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SPB1YCL054W IES2P40154 320 aa4.29□□□□□ -1.72
SPB1YCL054W PAT1P25644 796 aaKnown RBP4.29□□□□□ -1.72
SPB1YCL054W MAM3Q12296 706 aa4.29□□□□□ -1.72
SPB1YCL054W SPT16P32558 1035 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms