RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeastyeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM3YBR030W GYP5Q12344 894 aa6.96□□□□□ -1.29
RKM3YBR030W SPB4P25808 606 aaPredicted RBP6.96□□□□□ -1.3
RKM3YBR030W PTC3P34221 468 aaKnown RBP6.96□□□□□ -1.3
RKM3YBR030W DCW1P36091 449 aa6.93□□□□□ -1.3
RKM3YBR030W EAP1P36041 632 aaKnown RBP6.92□□□□□ -1.3
RKM3YBR030W YPR148CQ06523 435 aa6.92□□□□□ -1.3
RKM3YBR030W VPS70P47161 811 aa6.9□□□□□ -1.3
RKM3YBR030W GRE2Q12068 342 aaKnown RBP6.9□□□□□ -1.31
RKM3YBR030W RTG1P32607 177 aa6.89□□□□□ -1.31
RKM3YBR030W DAN4P47179 1161 aa6.88□□□□□ -1.31
RKM3YBR030W NST1P53935 1240 aa6.88□□□□□ -1.31
RKM3YBR030W HTA1P04911 132 aaKnown RBP6.87□□□□□ -1.31
RKM3YBR030W HTA2P04912 132 aa6.87□□□□□ -1.31
RKM3YBR030W SOL3P38858 249 aa6.87□□□□□ -1.31
RKM3YBR030W IFH1P39520 1085 aa6.87□□□□□ -1.31
RKM3YBR030W YNL035CP53962 389 aaKnown RBP6.86□□□□□ -1.31
RKM3YBR030W YEL023CP39992 682 aa6.85□□□□□ -1.31
RKM3YBR030W ATH1P48016 1211 aa6.85□□□□□ -1.31
RKM3YBR030W GUT1P32190 709 aa6.84□□□□□ -1.31
RKM3YBR030W ILV3P39522 585 aaKnown RBP6.82□□□□□ -1.32
RKM3YBR030W DSF2P38213 736 aa6.81□□□□□ -1.32
RKM3YBR030W KIN1P13185 1064 aa6.81□□□□□ -1.32
RKM3YBR030W SEC61P32915 480 aa6.81□□□□□ -1.32
RKM3YBR030W NCR1Q12200 1170 aa6.81□□□□□ -1.32
RKM3YBR030W PTC4P38089 393 aa6.79□□□□□ -1.32
RKM3YBR030W JIP4Q03361 876 aa6.79□□□□□ -1.32
RKM3YBR030W YDR344CQ05510 147 aa6.77□□□□□ -1.32
RKM3YBR030W NOP53Q12080 455 aaKnown RBP6.77□□□□□ -1.32
RKM3YBR030W YNR021WP53723 404 aaKnown RBP6.77□□□□□ -1.33
RKM3YBR030W PBS2P08018 668 aa6.75□□□□□ -1.33
RKM3YBR030W YJL171CP46992 396 aa6.75□□□□□ -1.33
RKM3YBR030W BMT6Q12291 365 aa6.75□□□□□ -1.33
RKM3YBR030W YGR273CP53329 174 aa6.74□□□□□ -1.33
RKM3YBR030W SAP30P38429 201 aa6.72□□□□□ -1.33
RKM3YBR030W MPH3P0CE00 602 aa6.71□□□□□ -1.33
RKM3YBR030W GLC3P32775 704 aa6.71□□□□□ -1.33
RKM3YBR030W MID1P41821 548 aa6.71□□□□□ -1.33
RKM3YBR030W PML39Q03760 334 aa6.71□□□□□ -1.33
RKM3YBR030W YDL129WQ07555 291 aa6.71□□□□□ -1.34
RKM3YBR030W AI4P03878 556 aa6.7□□□□□ -1.34
RKM3YBR030W AIM7Q12156 149 aa6.7□□□□□ -1.34
RKM3YBR030W HGH1P48362 394 aaKnown RBP6.69□□□□□ -1.34
RKM3YBR030W REF2P42073 533 aaPredicted RBP6.68□□□□□ -1.34
RKM3YBR030W UBP14P38237 781 aaKnown RBP6.66□□□□□ -1.34
RKM3YBR030W MAM3Q12296 706 aa6.66□□□□□ -1.34
RKM3YBR030W GUA1P38625 525 aaKnown RBP6.65□□□□□ -1.34
RKM3YBR030W TFG1P41895 735 aaPredicted RBP6.65□□□□□ -1.34
RKM3YBR030W YLR326WQ06170 240 aaKnown RBP6.65□□□□□ -1.34
RKM3YBR030W KEX1P09620 729 aa6.65□□□□□ -1.35
RKM3YBR030W VHR2P40041 505 aa6.65□□□□□ -1.35
RKM3YBR030W IES2P40154 320 aa6.65□□□□□ -1.35
RKM3YBR030W DIT2P21595 489 aa6.64□□□□□ -1.35
RKM3YBR030W NUP42P49686 430 aaKnown RBP6.64□□□□□ -1.35
RKM3YBR030W SLI15P38283 698 aa6.63□□□□□ -1.35
RKM3YBR030W YML020WQ03722 664 aa6.61□□□□□ -1.35
RKM3YBR030W YDR090CQ03193 310 aa6.6□□□□□ -1.35
RKM3YBR030W PCS60P38137 543 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
RKM3YBR030W MAK21Q12176 1025 aaKnown RBP6.59□□□□□ -1.35
RKM3YBR030W MPC54Q08550 464 aa6.58□□□□□ -1.36
RKM3YBR030W COX6P00427 148 aa6.58□□□□□ -1.36
RKM3YBR030W PEX29Q03370 554 aa6.58□□□□□ -1.36
RKM3YBR030W PRE3P38624 215 aa6.57□□□□□ -1.36
RKM3YBR030W HPC2Q01448 625 aa6.57□□□□□ -1.36
RKM3YBR030W NOP8Q08287 484 aaPredicted RBP6.57□□□□□ -1.36
RKM3YBR030W TFB3Q03290 321 aa6.55□□□□□ -1.36
RKM3YBR030W ARH1P48360 493 aa6.54□□□□□ -1.36
RKM3YBR030W ATF2P53296 535 aa6.54□□□□□ -1.36
RKM3YBR030W CDC73Q06697 393 aa6.54□□□□□ -1.36
RKM3YBR030W CHL1P22516 861 aaPredicted RBP6.53□□□□□ -1.36
RKM3YBR030W SSA1P10591 642 aaKnown RBP6.52□□□□□ -1.37
RKM3YBR030W RAD54P32863 898 aa6.52□□□□□ -1.37
RKM3YBR030W SLX8P40072 274 aa6.52□□□□□ -1.37
RKM3YBR030W GEF1P37020 779 aa6.51□□□□□ -1.37
RKM3YBR030W ELP4Q02884 456 aaKnown RBP6.51□□□□□ -1.37
RKM3YBR030W SUB2Q07478 446 aaKnown RBP6.51□□□□□ -1.37
RKM3YBR030W AIM44Q99299 758 aa6.51□□□□□ -1.37
RKM3YBR030W NMA111P53920 997 aa6.49□□□□□ -1.37
RKM3YBR030W DPL1Q05567 589 aa6.49□□□□□ -1.37
RKM3YBR030W HAP5Q02516 242 aa6.49□□□□□ -1.37
RKM3YBR030W PKC1P24583 1151 aa6.48□□□□□ -1.37
RKM3YBR030W ORC1P54784 914 aaPredicted RBP6.48□□□□□ -1.37
RKM3YBR030W KIC1P38692 1080 aa6.47□□□□□ -1.37
RKM3YBR030W BRL1P38770 471 aa6.45□□□□□ -1.38
RKM3YBR030W YPR015CQ12531 247 aa6.45□□□□□ -1.38
RKM3YBR030W ORC6P38826 435 aa6.44□□□□□ -1.38
RKM3YBR030W GAP1P19145 602 aaPredicted RBP6.43□□□□□ -1.38
RKM3YBR030W RAM1P22007 431 aa6.43□□□□□ -1.38
RKM3YBR030W BCK2P33306 851 aa6.43□□□□□ -1.38
RKM3YBR030W BNI4P53858 892 aa6.43□□□□□ -1.38
RKM3YBR030W PDR1P12383 1068 aa6.42□□□□□ -1.38
RKM3YBR030W GLN1P32288 370 aaKnown RBP6.42□□□□□ -1.38
RKM3YBR030W SPT23P35210 1082 aa6.42□□□□□ -1.38
RKM3YBR030W BIM1P40013 344 aa6.42□□□□□ -1.38
RKM3YBR030W SSA2P10592 639 aaKnown RBP6.41□□□□□ -1.38
RKM3YBR030W VRP1P37370 817 aa6.41□□□□□ -1.38
RKM3YBR030W YJL007CP47080 104 aa6.41□□□□□ -1.38
RKM3YBR030W ATG32P40458 529 aa6.4□□□□□ -1.38
RKM3YBR030W ISU2Q12056 156 aa6.4□□□□□ -1.38
RKM3YBR030W PSE1P32337 1089 aaKnown RBP6.39□□□□□ -1.39
RKM3YBR030W CSN12P47130 423 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms