RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C NOP53Q12080 455 aaKnown RBP5.06□□□□□ -1.6
HHF1YBR009C MSB4Q12317 492 aa5.06□□□□□ -1.6
HHF1YBR009C GYP5Q12344 894 aa5.06□□□□□ -1.6
HHF1YBR009C VPS70P47161 811 aa5.05□□□□□ -1.6
HHF1YBR009C GRE2Q12068 342 aaKnown RBP5.05□□□□□ -1.6
HHF1YBR009C LDB19Q12502 818 aa5.05□□□□□ -1.6
HHF1YBR009C YPR148CQ06523 435 aa5.04□□□□□ -1.6
HHF1YBR009C IOC2Q12072 812 aa5.04□□□□□ -1.6
HHF1YBR009C AIM44Q99299 758 aa5.04□□□□□ -1.6
HHF1YBR009C DCW1P36091 449 aa5.03□□□□□ -1.6
HHF1YBR009C ULI1P43604 169 aa5.03□□□□□ -1.6
HHF1YBR009C ATH1P48016 1211 aa5.03□□□□□ -1.6
HHF1YBR009C KIN1P13185 1064 aa5.02□□□□□ -1.61
HHF1YBR009C GUT1P32190 709 aa5.02□□□□□ -1.61
HHF1YBR009C EAP1P36041 632 aaKnown RBP5.02□□□□□ -1.61
HHF1YBR009C TRP5P00931 707 aaKnown RBP5□□□□□ -1.61
HHF1YBR009C HTA1P04911 132 aaKnown RBP5□□□□□ -1.61
HHF1YBR009C HTA2P04912 132 aa5□□□□□ -1.61
HHF1YBR009C YML020WQ03722 664 aa4.99□□□□□ -1.61
HHF1YBR009C DSF2P38213 736 aa4.98□□□□□ -1.61
HHF1YBR009C NAP1P25293 417 aaKnown RBP4.97□□□□□ -1.61
HHF1YBR009C YNR021WP53723 404 aaKnown RBP4.97□□□□□ -1.61
HHF1YBR009C ORC1P54784 914 aaPredicted RBP4.97□□□□□ -1.61
HHF1YBR009C RGA2Q06407 1009 aa4.97□□□□□ -1.61
HHF1YBR009C SOL3P38858 249 aa4.96□□□□□ -1.62
HHF1YBR009C YEL023CP39992 682 aa4.96□□□□□ -1.62
HHF1YBR009C HGH1P48362 394 aaKnown RBP4.96□□□□□ -1.62
HHF1YBR009C IOC4Q04213 475 aa4.95□□□□□ -1.62
HHF1YBR009C PBS2P08018 668 aa4.94□□□□□ -1.62
HHF1YBR009C GLC3P32775 704 aa4.94□□□□□ -1.62
HHF1YBR009C PTC4P38089 393 aa4.94□□□□□ -1.62
HHF1YBR009C YGR273CP53329 174 aa4.94□□□□□ -1.62
HHF1YBR009C NOP8Q08287 484 aaPredicted RBP4.94□□□□□ -1.62
HHF1YBR009C RTG1P32607 177 aa4.93□□□□□ -1.62
HHF1YBR009C NST1P53935 1240 aa4.93□□□□□ -1.62
HHF1YBR009C YNL035CP53962 389 aaKnown RBP4.93□□□□□ -1.62
HHF1YBR009C JIP4Q03361 876 aa4.93□□□□□ -1.62
HHF1YBR009C GUA1P38625 525 aaKnown RBP4.91□□□□□ -1.62
HHF1YBR009C REF2P42073 533 aaPredicted RBP4.91□□□□□ -1.62
HHF1YBR009C DAN4P47179 1161 aa4.91□□□□□ -1.62
HHF1YBR009C AIM7Q12156 149 aa4.91□□□□□ -1.62
HHF1YBR009C UBP14P38237 781 aaKnown RBP4.9□□□□□ -1.63
HHF1YBR009C VHR2P40041 505 aa4.9□□□□□ -1.63
HHF1YBR009C SLX8P40072 274 aa4.9□□□□□ -1.63
HHF1YBR009C MPH3P0CE00 602 aa4.89□□□□□ -1.63
HHF1YBR009C SEC61P32915 480 aa4.89□□□□□ -1.63
HHF1YBR009C NCR1Q12200 1170 aa4.89□□□□□ -1.63
HHF1YBR009C AI4P03878 556 aa4.88□□□□□ -1.63
HHF1YBR009C YLR326WQ06170 240 aaKnown RBP4.88□□□□□ -1.63
HHF1YBR009C KEX1P09620 729 aa4.87□□□□□ -1.63
HHF1YBR009C SSA1P10591 642 aaKnown RBP4.87□□□□□ -1.63
HHF1YBR009C GEF1P37020 779 aa4.87□□□□□ -1.63
HHF1YBR009C ILV3P39522 585 aaKnown RBP4.87□□□□□ -1.63
HHF1YBR009C IES2P40154 320 aa4.87□□□□□ -1.63
HHF1YBR009C MAM3Q12296 706 aa4.87□□□□□ -1.63
HHF1YBR009C DIT2P21595 489 aa4.86□□□□□ -1.63
HHF1YBR009C TFG1P41895 735 aaPredicted RBP4.86□□□□□ -1.63
HHF1YBR009C NUP42P49686 430 aaKnown RBP4.85□□□□□ -1.63
HHF1YBR009C YDR090CQ03193 310 aa4.85□□□□□ -1.63
HHF1YBR009C PML39Q03760 334 aa4.85□□□□□ -1.63
HHF1YBR009C SUB2Q07478 446 aaKnown RBP4.85□□□□□ -1.63
HHF1YBR009C COX6P00427 148 aa4.84□□□□□ -1.63
HHF1YBR009C RAD54P32863 898 aa4.84□□□□□ -1.63
HHF1YBR009C BCK2P33306 851 aa4.84□□□□□ -1.63
HHF1YBR009C PCS60P38137 543 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
HHF1YBR009C MID1P41821 548 aa4.84□□□□□ -1.63
HHF1YBR009C KIC1P38692 1080 aa4.83□□□□□ -1.64
HHF1YBR009C HPC2Q01448 625 aa4.83□□□□□ -1.64
HHF1YBR009C TFB3Q03290 321 aa4.83□□□□□ -1.64
HHF1YBR009C MAK21Q12176 1025 aaKnown RBP4.83□□□□□ -1.64
HHF1YBR009C SLI15P38283 698 aa4.82□□□□□ -1.64
HHF1YBR009C YDL129WQ07555 291 aa4.82□□□□□ -1.64
HHF1YBR009C SAP30P38429 201 aa4.81□□□□□ -1.64
HHF1YBR009C NOP7P53261 605 aaKnown RBP4.8□□□□□ -1.64
HHF1YBR009C ATF2P53296 535 aa4.8□□□□□ -1.64
HHF1YBR009C PKC1P24583 1151 aa4.78□□□□□ -1.64
HHF1YBR009C MRX12P47084 519 aa4.78□□□□□ -1.64
HHF1YBR009C PEX29Q03370 554 aa4.77□□□□□ -1.65
HHF1YBR009C CDC73Q06697 393 aa4.77□□□□□ -1.65
HHF1YBR009C CHL1P22516 861 aaPredicted RBP4.76□□□□□ -1.65
HHF1YBR009C BRL1P38770 471 aa4.76□□□□□ -1.65
HHF1YBR009C BIM1P40013 344 aa4.76□□□□□ -1.65
HHF1YBR009C MPC54Q08550 464 aa4.76□□□□□ -1.65
HHF1YBR009C YDR344CQ05510 147 aa4.75□□□□□ -1.65
HHF1YBR009C DPL1Q05567 589 aa4.75□□□□□ -1.65
HHF1YBR009C GLN1P32288 370 aaKnown RBP4.74□□□□□ -1.65
HHF1YBR009C YJL007CP47080 104 aa4.74□□□□□ -1.65
HHF1YBR009C SNU71P53207 620 aaKnown RBP4.74□□□□□ -1.65
HHF1YBR009C RPP1BP10622 106 aaKnown RBP4.73□□□□□ -1.65
HHF1YBR009C SSA4P22202 642 aaKnown RBP4.73□□□□□ -1.65
HHF1YBR009C SLD2P34252 453 aa4.73□□□□□ -1.65
HHF1YBR009C ORC6P38826 435 aa4.73□□□□□ -1.65
HHF1YBR009C RGA1P39083 1007 aa4.73□□□□□ -1.65
HHF1YBR009C ATG32P40458 529 aa4.73□□□□□ -1.65
HHF1YBR009C NMA111P53920 997 aa4.73□□□□□ -1.65
HHF1YBR009C ARH1P48360 493 aa4.72□□□□□ -1.65
HHF1YBR009C ELP4Q02884 456 aaKnown RBP4.72□□□□□ -1.65
HHF1YBR009C GAP1P19145 602 aaPredicted RBP4.71□□□□□ -1.66
HHF1YBR009C ISU2Q12056 156 aa4.71□□□□□ -1.66
HHF1YBR009C SSA2P10592 639 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms