RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W TY1B-ORQ92393 1755 aa3.56□□□□□ -1.84
NUP170YBL079W TY1B-DR3Q99231 1755 aa3.56□□□□□ -1.84
NUP170YBL079W SNQ2P32568 1501 aaKnown RBP3.56□□□□□ -1.84
NUP170YBL079W SPO14P36126 1683 aa3.55□□□□□ -1.84
NUP170YBL079W TY2B-LR1P0C2J3 1770 aa3.54□□□□□ -1.84
NUP170YBL079W TY2B-FP0CX63 1770 aa3.54□□□□□ -1.84
NUP170YBL079W TY2B-GR2P0CX64 1770 aa3.54□□□□□ -1.84
NUP170YBL079W TY2B-CP25384 1770 aa3.54□□□□□ -1.84
NUP170YBL079W TY2B-DR2Q03494 1770 aa3.54□□□□□ -1.84
NUP170YBL079W TY1B-DR1Q03855 1755 aa3.54□□□□□ -1.84
NUP170YBL079W TY2B-DR3Q07791 1770 aaKnown RBP3.54□□□□□ -1.84
NUP170YBL079W TY2B-OR1Q12113 1770 aa3.54□□□□□ -1.84
NUP170YBL079W TY2B-DR1Q12472 1770 aa3.54□□□□□ -1.84
NUP170YBL079W TY2B-OR2Q12501 1770 aa3.54□□□□□ -1.84
NUP170YBL079W BFR2Q06631 534 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W CFT1Q06632 1357 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W TY1B-HO13535 1793 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-DR5P0C2I2 1755 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-DR6P0C2I3 1755 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-LR2P0C2I5 1755 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-LR3P0C2I6 1755 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W TY1B-PR1P0C2I9 1755 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W TY1B-PR2P0C2J0 1756 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-PR3P0C2J1 1755 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W TY1B-JR1P47098 1755 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-ML2Q03434 1755 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W TY1B-ER1Q03612 1755 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-ML1Q04711 1755 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W TY1B-GR2Q12269 1755 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-OLQ12273 1755 aa3.52□□□□□ -1.85
NUP170YBL079W TY1B-PLQ12414 1755 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W BNI1P41832 1953 aa3.52□□□□□ -1.85
NUP170YBL079W NUP157P40064 1391 aaKnown RBP3.52□□□□□ -1.85
NUP170YBL079W TY3B-GQ99315 1547 aa3.51□□□□□ -1.85
NUP170YBL079W TY1B-NL2Q99337 1749 aaKnown RBP3.5□□□□□ -1.85
NUP170YBL079W TY2B-BQ12491 1770 aa3.5□□□□□ -1.85
NUP170YBL079W NAP1P25293 417 aaKnown RBP3.5□□□□□ -1.85
NUP170YBL079W PDR15Q04182 1529 aaKnown RBP3.49□□□□□ -1.85
NUP170YBL079W YAP3P38749 330 aa3.48□□□□□ -1.85
NUP170YBL079W CHC1P22137 1653 aaKnown RBP3.48□□□□□ -1.85
NUP170YBL079W DNF3Q12674 1656 aa3.46□□□□□ -1.86
NUP170YBL079W MAK10Q02197 733 aa3.45□□□□□ -1.86
NUP170YBL079W TY1B-JR2P47100 1755 aaKnown RBP3.44□□□□□ -1.86
NUP170YBL079W TY1B-ER2Q03619 1755 aa3.44□□□□□ -1.86
NUP170YBL079W TY1B-MR1Q04214 1755 aa3.44□□□□□ -1.86
NUP170YBL079W TY1B-MR2Q04670 1755 aaKnown RBP3.44□□□□□ -1.86
NUP170YBL079W TY1B-LR1Q12088 1755 aaKnown RBP3.44□□□□□ -1.86
NUP170YBL079W TY1B-NL1Q12112 1755 aa3.44□□□□□ -1.86
NUP170YBL079W TY1B-GR1Q12141 1755 aa3.44□□□□□ -1.86
NUP170YBL079W TY1B-BLQ12490 1755 aa3.44□□□□□ -1.86
NUP170YBL079W YRF1-1P0CX20 1796 aa3.44□□□□□ -1.86
NUP170YBL079W YRF1-5P0CX21 1796 aa3.44□□□□□ -1.86
NUP170YBL079W YRF1-8P0CX22 1796 aa3.44□□□□□ -1.86
NUP170YBL079W SRB8P25648 1427 aa3.43□□□□□ -1.86
NUP170YBL079W GEA1P47102 1408 aaPredicted RBP3.43□□□□□ -1.86
NUP170YBL079W VMR1P38735 1592 aa3.43□□□□□ -1.86
NUP170YBL079W PRI1P10363 409 aa3.42□□□□□ -1.86
NUP170YBL079W UBP1P25037 809 aa3.41□□□□□ -1.86
NUP170YBL079W YAH1Q12184 172 aaKnown RBP3.4□□□□□ -1.86
NUP170YBL079W PAF1P38351 445 aa3.4□□□□□ -1.86
NUP170YBL079W IRA1P18963 3092 aa3.39□□□□□ -1.87
NUP170YBL079W MRX12P47084 519 aa3.37□□□□□ -1.87
NUP170YBL079W BUD21Q08492 214 aaPredicted RBP3.37□□□□□ -1.87
NUP170YBL079W GTT3P39996 337 aa3.36□□□□□ -1.87
NUP170YBL079W ARO1P08566 1588 aaKnown RBP3.35□□□□□ -1.87
NUP170YBL079W IFH1P39520 1085 aa3.34□□□□□ -1.87
NUP170YBL079W CKB1P43639 278 aa3.34□□□□□ -1.87
NUP170YBL079W SPT7P35177 1332 aa3.34□□□□□ -1.88
NUP170YBL079W RPS9BP05755 195 aaKnown RBP3.33□□□□□ -1.88
NUP170YBL079W PDR5P33302 1511 aaKnown RBP3.33□□□□□ -1.88
NUP170YBL079W BCK1Q01389 1478 aa3.32□□□□□ -1.88
NUP170YBL079W IPL1P38991 367 aa3.32□□□□□ -1.88
NUP170YBL079W SAS10Q12136 610 aaPredicted RBP3.32□□□□□ -1.88
NUP170YBL079W NUP188P52593 1655 aaKnown RBP3.32□□□□□ -1.88
NUP170YBL079W YEF3P16521 1044 aaKnown RBP3.32□□□□□ -1.88
NUP170YBL079W SEC7P11075 2009 aaKnown RBP3.31□□□□□ -1.88
NUP170YBL079W YSP2Q06681 1438 aa3.31□□□□□ -1.88
NUP170YBL079W YMR074CQ04773 145 aa3.31□□□□□ -1.88
NUP170YBL079W IML1P47170 1584 aa3.3□□□□□ -1.88
NUP170YBL079W PDR11P40550 1411 aa3.3□□□□□ -1.88
NUP170YBL079W YBT1P32386 1661 aa3.29□□□□□ -1.88
NUP170YBL079W IRA2P19158 3079 aa3.28□□□□□ -1.88
NUP170YBL079W NSR1P27476 414 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
NUP170YBL079W UGA2P38067 497 aa3.28□□□□□ -1.88
NUP170YBL079W YIL055CP40523 627 aaKnown RBP3.28□□□□□ -1.88
NUP170YBL079W YJL181WP46987 611 aa3.28□□□□□ -1.88
NUP170YBL079W PRP40P33203 583 aaKnown RBP3.27□□□□□ -1.89
NUP170YBL079W THI12P42883 340 aa3.27□□□□□ -1.89
NUP170YBL079W THI5P43534 340 aa3.27□□□□□ -1.89
NUP170YBL079W THI11P47183 340 aa3.27□□□□□ -1.89
NUP170YBL079W THI13Q07748 340 aa3.27□□□□□ -1.89
NUP170YBL079W LEU3P08638 886 aa3.27□□□□□ -1.89
NUP170YBL079W NOP7P53261 605 aaKnown RBP3.26□□□□□ -1.89
NUP170YBL079W ROM2P51862 1356 aaKnown RBP3.26□□□□□ -1.89
NUP170YBL079W IMH1Q06704 911 aaKnown RBP3.25□□□□□ -1.89
NUP170YBL079W YLR419WQ06698 1435 aaKnown RBP3.25□□□□□ -1.89
NUP170YBL079W GLN1P32288 370 aaKnown RBP3.25□□□□□ -1.89
NUP170YBL079W ALD2P47771 506 aa3.25□□□□□ -1.89
NUP170YBL079W PTP3P40048 928 aa3.25□□□□□ -1.89
NUP170YBL079W GCN2P15442 1659 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms