RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 GEA1P47102 1408 aaPredicted RBP14.98□□□□□ -0.01
RDN18-1RDN18-1 IFH1P39520 1085 aa14.96□□□□□ -0.01
RDN18-1RDN18-1 NUP170P38181 1502 aa14.94□□□□□ -0.02
RDN18-1RDN18-1 SNT2P53127 1403 aa14.91□□□□□ -0.02
RDN18-1RDN18-1 TY3B-GQ99315 1547 aa14.89□□□□□ -0.03
RDN18-1RDN18-1 DNF1P32660 1571 aa14.88□□□□□ -0.03
RDN18-1RDN18-1 RPA190P10964 1664 aaKnown RBP14.87□□□□□ -0.03
RDN18-1RDN18-1 SSM4P40318 1319 aa14.86□□□□□ -0.03
RDN18-1RDN18-1 NTE1Q04958 1679 aa14.82□□□□□ -0.04
RDN18-1RDN18-1 RPO21P04050 1733 aaKnown RBP14.78□□□□□ -0.04
RDN18-1RDN18-1 YBT1P32386 1661 aa14.77□□□□□ -0.04
RDN18-1RDN18-1 IRC20Q06554 1556 aa14.74□□□□□ -0.05
RDN18-1RDN18-1 MTC1P47018 478 aaKnown RBP14.72□□□□□ -0.05
RDN18-1RDN18-1 GEA2P39993 1459 aaKnown RBP14.71□□□□□ -0.05
RDN18-1RDN18-1 VPS15P22219 1454 aa14.67□□□□□ -0.06
RDN18-1RDN18-1 RTT106P40161 455 aa14.66□□□□□ -0.06
RDN18-1RDN18-1 NUP159P40477 1460 aa14.64□□□□□ -0.07
RDN18-1RDN18-1 CAT8P39113 1433 aa14.59□□□□□ -0.07
RDN18-1RDN18-1 YRF1-1P0CX20 1796 aa14.58□□□□□ -0.07
RDN18-1RDN18-1 YRF1-5P0CX21 1796 aa14.58□□□□□ -0.07
RDN18-1RDN18-1 YRF1-8P0CX22 1796 aa14.58□□□□□ -0.07
RDN18-1RDN18-1 GDB1Q06625 1536 aa14.58□□□□□ -0.08
RDN18-1RDN18-1 SPO14P36126 1683 aa14.53□□□□□ -0.08
RDN18-1RDN18-1 PDR10P51533 1564 aa14.53□□□□□ -0.08
RDN18-1RDN18-1 ARO1P08566 1588 aaKnown RBP14.52□□□□□ -0.09
RDN18-1RDN18-1 PDR12Q02785 1511 aa14.51□□□□□ -0.09
RDN18-1RDN18-1 SRB8P25648 1427 aa14.45□□□□□ -0.1
RDN18-1RDN18-1 MET10P39692 1035 aa14.44□□□□□ -0.1
RDN18-1RDN18-1 MET5P47169 1442 aa14.43□□□□□ -0.1
RDN18-1RDN18-1 NUP157P40064 1391 aaKnown RBP14.43□□□□□ -0.1
RDN18-1RDN18-1 BUD3P25558 1636 aa14.42□□□□□ -0.1
RDN18-1RDN18-1 CKB1P43639 278 aa14.4□□□□□ -0.1
RDN18-1RDN18-1 GCN2P15442 1659 aa14.32□□□□□ -0.12
RDN18-1RDN18-1 YSP2Q06681 1438 aa14.32□□□□□ -0.12
RDN18-1RDN18-1 BUD21Q08492 214 aaPredicted RBP14.22□□□□□ -0.13
RDN18-1RDN18-1 IQG1Q12280 1495 aa14.22□□□□□ -0.13
RDN18-1RDN18-1 MMS1Q06211 1407 aa14.2□□□□□ -0.14
RDN18-1RDN18-1 SEC7P11075 2009 aaKnown RBP14.18□□□□□ -0.14
RDN18-1RDN18-1 POL5P39985 1022 aaKnown RBP14.15□□□□□ -0.14
RDN18-1RDN18-1 YOR093CQ12275 1648 aa14.12□□□□□ -0.15
RDN18-1RDN18-1 BNR1P40450 1375 aa14.11□□□□□ -0.15
RDN18-1RDN18-1 NSR1P27476 414 aaKnown RBP RIP-Chip data14.1□□□□□ -0.15not detected
RDN18-1RDN18-1 CHC1P22137 1653 aaKnown RBP14.07□□□□□ -0.16
RDN18-1RDN18-1 PDR5P33302 1511 aaKnown RBP14.05□□□□□ -0.16
RDN18-1RDN18-1 NOP7P53261 605 aaKnown RBP14.04□□□□□ -0.16
RDN18-1RDN18-1 LTE1P07866 1435 aa14.03□□□□□ -0.16
RDN18-1RDN18-1 DOP1Q03921 1698 aa14.02□□□□□ -0.17
RDN18-1RDN18-1 VMR1P38735 1592 aa13.99□□□□□ -0.17
RDN18-1RDN18-1 PDR11P40550 1411 aa13.97□□□□□ -0.17
RDN18-1RDN18-1 PAF1P38351 445 aa13.94□□□□□ -0.18
RDN18-1RDN18-1 BFR2Q06631 534 aaKnown RBP13.94□□□□□ -0.18
RDN18-1RDN18-1 TRM3Q07527 1436 aa13.93□□□□□ -0.18
RDN18-1RDN18-1 DRS2P39524 1355 aa13.92□□□□□ -0.18
RDN18-1RDN18-1 SPT7P35177 1332 aa13.91□□□□□ -0.18
RDN18-1RDN18-1 NUP188P52593 1655 aaKnown RBP13.91□□□□□ -0.18
RDN18-1RDN18-1 RAV1P47104 1357 aa13.88□□□□□ -0.19
RDN18-1RDN18-1 BNI1P41832 1953 aa13.87□□□□□ -0.19
RDN18-1RDN18-1 ORC1P54784 914 aaPredicted RBP13.87□□□□□ -0.19
RDN18-1RDN18-1 IML1P47170 1584 aa13.86□□□□□ -0.19
RDN18-1RDN18-1 SEC3P33332 1336 aaKnown RBP13.84□□□□□ -0.19
RDN18-1RDN18-1 DNF2Q12675 1612 aa13.83□□□□□ -0.2
RDN18-1RDN18-1 TY3B-IQ7LHG5 1498 aaKnown RBP13.83□□□□□ -0.2
RDN18-1RDN18-1 RTC1Q08281 1341 aa13.83□□□□□ -0.2
RDN18-1RDN18-1 ENP1P38333 483 aaKnown RBP13.83□□□□□ -0.2
RDN18-1RDN18-1 ITT1Q04638 464 aa13.82□□□□□ -0.2
RDN18-1RDN18-1 NUP192P47054 1683 aa13.81□□□□□ -0.2
RDN18-1RDN18-1 MHP1P43638 1398 aa13.78□□□□□ -0.2
RDN18-1RDN18-1 TAF5P38129 798 aa13.75□□□□□ -0.21
RDN18-1RDN18-1 PSD2P53037 1138 aaKnown RBP13.71□□□□□ -0.21
RDN18-1RDN18-1 TYS1P36421 394 aaKnown RBP13.7□□□□□ -0.22
RDN18-1RDN18-1 LEU3P08638 886 aa13.69□□□□□ -0.22
RDN18-1RDN18-1 YLR419WQ06698 1435 aaKnown RBP13.69□□□□□ -0.22
RDN18-1RDN18-1 KIP3P53086 805 aaKnown RBP13.67□□□□□ -0.22
RDN18-1RDN18-1 ESL2P36168 1195 aa13.66□□□□□ -0.22
RDN18-1RDN18-1 IPL1P38991 367 aa13.65□□□□□ -0.22
RDN18-1RDN18-1 NOP2P40991 618 aaKnown RBP13.62□□□□□ -0.23
RDN18-1RDN18-1 PDS5Q04264 1277 aa13.6□□□□□ -0.23
RDN18-1RDN18-1 NST1P53935 1240 aa13.58□□□□□ -0.24
RDN18-1RDN18-1 PRS1P32895 427 aaKnown RBP13.56□□□□□ -0.24
RDN18-1RDN18-1 URN1Q06525 465 aaKnown RBP13.55□□□□□ -0.24
RDN18-1RDN18-1 RAD9P14737 1309 aa13.55□□□□□ -0.24
RDN18-1RDN18-1 SPE2P21182 396 aa13.54□□□□□ -0.24
RDN18-1RDN18-1 YAP3P38749 330 aa13.54□□□□□ -0.24
RDN18-1RDN18-1 BCK1Q01389 1478 aa13.52□□□□□ -0.24
RDN18-1RDN18-1 ALD4P46367 519 aaKnown RBP13.5□□□□□ -0.25
RDN18-1RDN18-1 TAF8Q03750 510 aa13.49□□□□□ -0.25
RDN18-1RDN18-1 MLP1Q02455 1875 aaKnown RBP13.47□□□□□ -0.25
RDN18-1RDN18-1 CAB1Q04430 367 aa13.46□□□□□ -0.26
RDN18-1RDN18-1 HAP1P0CE41 1502 aa13.42□□□□□ -0.26
RDN18-1RDN18-1 DNF3Q12674 1656 aa13.42□□□□□ -0.26
RDN18-1RDN18-1 RTG3P38165 486 aa13.41□□□□□ -0.26
RDN18-1RDN18-1 CHZ1P40019 153 aaPredicted RBP13.39□□□□□ -0.27
RDN18-1RDN18-1 FKH1P40466 484 aa13.36□□□□□ -0.27
RDN18-1RDN18-1 KRE5P22023 1365 aa13.35□□□□□ -0.27
RDN18-1RDN18-1 YML133CQ03099 1374 aa13.34□□□□□ -0.27
RDN18-1RDN18-1 YLL067CQ07888 1374 aa13.34□□□□□ -0.27
RDN18-1RDN18-1 YLL066CQ99208 1374 aa13.34□□□□□ -0.27
RDN18-1RDN18-1 SCT1P32784 759 aa13.34□□□□□ -0.27
RDN18-1RDN18-1 YEF3P16521 1044 aaKnown RBP13.29□□□□□ -0.28
RDN18-1RDN18-1 TRK1P12685 1235 aa13.28□□□□□ -0.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms