RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 VPS8Q8N3P4 1428 aa27.78■■■□□ 2.04
PHGDH-232ENST00000641947 GRIN2AQ12879 1464 aa27.73■■■□□ 2.03
PHGDH-232ENST00000641947 SYNJ2O15056 1496 aa27.71■■■□□ 2.03
PHGDH-232ENST00000641947 EFCAB5A4FU69 1503 aa27.67■■■□□ 2.02
PHGDH-232ENST00000641947 SAMD9Q5K651 1589 aa27.66■■■□□ 2.02
PHGDH-232ENST00000641947 IQGAP2Q13576 1575 aa27.66■■■□□ 2.02
PHGDH-232ENST00000641947 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
PHGDH-232ENST00000641947 CEP170Q5SW79 1584 aa27.63■■■□□ 2.01
PHGDH-232ENST00000641947 CHD1O14646 1710 aa27.59■■■□□ 2.01
PHGDH-232ENST00000641947 FHOD3Q2V2M9 1422 aa27.58■■■□□ 2.01
PHGDH-232ENST00000641947 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
PHGDH-232ENST00000641947 P3H3Q8IVL6 736 aa27.55■■■□□ 2
PHGDH-232ENST00000641947 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
PHGDH-232ENST00000641947 NUP160Q12769 1436 aa27.53■■■□□ 2
PHGDH-232ENST00000641947 FBLN2P98095 1184 aa27.52■■■□□ 2
PHGDH-232ENST00000641947 UGGT2Q9NYU1 1516 aa27.51■■□□□ 1.99
PHGDH-232ENST00000641947 PCGF6Q9BYE7 350 aa27.5■■□□□ 1.99
PHGDH-232ENST00000641947 PCF11O94913 1555 aaKnown RBP27.5■■□□□ 1.99
PHGDH-232ENST00000641947 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
PHGDH-232ENST00000641947 TTBK1Q5TCY1 1321 aaPredicted RBP27.43■■□□□ 1.98
PHGDH-232ENST00000641947 DISP1Q96F81 1524 aa27.41■■□□□ 1.98
PHGDH-232ENST00000641947 KIAA0556O60303 1618 aa27.41■■□□□ 1.98
PHGDH-232ENST00000641947 LRRIQ1Q96JM4 1722 aa27.37■■□□□ 1.97
PHGDH-232ENST00000641947 FMN1Q68DA7 1419 aa27.36■■□□□ 1.97
PHGDH-232ENST00000641947 FYCO1Q9BQS8 1478 aa27.36■■□□□ 1.97
PHGDH-232ENST00000641947 CFAP43Q8NDM7 1665 aa27.36■■□□□ 1.97
PHGDH-232ENST00000641947 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
PHGDH-232ENST00000641947 CASKIN1Q8WXD9 1431 aa27.34■■□□□ 1.97
PHGDH-232ENST00000641947 APLP2Q06481 763 aa27.33■■□□□ 1.97
PHGDH-232ENST00000641947 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
PHGDH-232ENST00000641947 KANK4Q5T7N3 995 aaPredicted RBP27.29■■□□□ 1.96
PHGDH-232ENST00000641947 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
PHGDH-232ENST00000641947 JPH4Q96JJ6 628 aa27.23■■□□□ 1.95
PHGDH-232ENST00000641947 CLASP1Q7Z460 1538 aa27.2■■□□□ 1.94
PHGDH-232ENST00000641947 LRRC9Q6ZRR7 1453 aa27.18■■□□□ 1.94
PHGDH-232ENST00000641947 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
PHGDH-232ENST00000641947 HECW1Q76N89 1606 aa27.17■■□□□ 1.94
PHGDH-232ENST00000641947 CARMIL2Q6F5E8 1435 aa27.13■■□□□ 1.93
PHGDH-232ENST00000641947 RAPGEF6Q8TEU7 1601 aa27.13■■□□□ 1.93
PHGDH-232ENST00000641947 PRG4Q92954 1404 aaPredicted RBP27.12■■□□□ 1.93
PHGDH-232ENST00000641947 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
PHGDH-232ENST00000641947 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
PHGDH-232ENST00000641947 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
PHGDH-232ENST00000641947 NUP153P49790 1475 aaKnown RBP27.05■■□□□ 1.92
PHGDH-232ENST00000641947 CCDC18Q5T9S5 1454 aa27.05■■□□□ 1.92
PHGDH-232ENST00000641947 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
PHGDH-232ENST00000641947 PLB1Q6P1J6 1458 aa27.04■■□□□ 1.92
PHGDH-232ENST00000641947 ABCA8O94911 1581 aa27■■□□□ 1.91
PHGDH-232ENST00000641947 EHBP1L1Q8N3D4 1523 aa26.96■■□□□ 1.91
PHGDH-232ENST00000641947 RRBP1Q9P2E9 1410 aaKnown RBP26.95■■□□□ 1.91
PHGDH-232ENST00000641947 PHLDB1Q86UU1 1377 aa26.95■■□□□ 1.9
PHGDH-232ENST00000641947 ARID3CA6NKF2 412 aa26.94■■□□□ 1.9
PHGDH-232ENST00000641947 SUPT6HQ7KZ85 1726 aaKnown RBP26.92■■□□□ 1.9
PHGDH-232ENST00000641947 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
PHGDH-232ENST00000641947 PTPRGP23470 1445 aa26.9■■□□□ 1.9
PHGDH-232ENST00000641947 ARHGEF11O15085 1522 aa26.86■■□□□ 1.89
PHGDH-232ENST00000641947 NCOA2Q15596 1464 aa26.86■■□□□ 1.89
PHGDH-232ENST00000641947 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
PHGDH-232ENST00000641947 ATP10BO94823 1461 aa26.79■■□□□ 1.88
PHGDH-232ENST00000641947 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
PHGDH-232ENST00000641947 UACAQ9BZF9 1416 aa26.77■■□□□ 1.88
PHGDH-232ENST00000641947 HNRNPUL2Q1KMD3 747 aaKnown RBP26.76■■□□□ 1.88
PHGDH-232ENST00000641947 ABCC2Q92887 1545 aa26.75■■□□□ 1.87
PHGDH-232ENST00000641947 ADCY10Q96PN6 1610 aa26.74■■□□□ 1.87
PHGDH-232ENST00000641947 FGD6Q6ZV73 1430 aa26.73■■□□□ 1.87
PHGDH-232ENST00000641947 KIF14Q15058 1648 aa26.73■■□□□ 1.87
PHGDH-232ENST00000641947 MYOM3Q5VTT5 1437 aa26.72■■□□□ 1.87
PHGDH-232ENST00000641947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
PHGDH-232ENST00000641947 TROQ12816 1431 aaPredicted RBP26.71■■□□□ 1.87
PHGDH-232ENST00000641947 PTPN23Q9H3S7 1636 aa26.65■■□□□ 1.86
PHGDH-232ENST00000641947 UHRF1BP1LA0JNW5 1464 aa26.65■■□□□ 1.86
PHGDH-232ENST00000641947 CDK11AQ9UQ88 783 aaPredicted RBP26.65■■□□□ 1.86
PHGDH-232ENST00000641947 HRCP23327 699 aa26.64■■□□□ 1.86
PHGDH-232ENST00000641947 ZCCHC11Q5TAX3 1644 aaKnown RBP26.64■■□□□ 1.85
PHGDH-232ENST00000641947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.61■■□□□ 1.85
PHGDH-232ENST00000641947 FAM50AQ14320 339 aaKnown RBP26.61■■□□□ 1.85
PHGDH-232ENST00000641947 ITGAEP38570 1179 aa26.57■■□□□ 1.84
PHGDH-232ENST00000641947 TCOF1Q13428 1488 aaKnown RBP26.57■■□□□ 1.84
PHGDH-232ENST00000641947 KDM5BQ9UGL1 1544 aa26.57■■□□□ 1.84
PHGDH-232ENST00000641947 ITSN2Q9NZM3 1697 aa26.56■■□□□ 1.84
PHGDH-232ENST00000641947 CDC42BPAQ5VT25 1732 aa26.56■■□□□ 1.84
PHGDH-232ENST00000641947 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
PHGDH-232ENST00000641947 PLEKHD1A6NEE1 506 aa26.54■■□□□ 1.84
PHGDH-232ENST00000641947 MIA2Q96PC5 1412 aa26.53■■□□□ 1.84
PHGDH-232ENST00000641947 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
PHGDH-232ENST00000641947 PTPRKQ15262 1439 aa26.49■■□□□ 1.83
PHGDH-232ENST00000641947 TTC37Q6PGP7 1564 aa26.46■■□□□ 1.83
PHGDH-232ENST00000641947 CDC42BPBQ9Y5S2 1711 aa26.43■■□□□ 1.82
PHGDH-232ENST00000641947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.42■■□□□ 1.826e-6■■■■■ 38.2
PHGDH-232ENST00000641947 PREX2Q70Z35 1606 aa26.41■■□□□ 1.82
PHGDH-232ENST00000641947 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
PHGDH-232ENST00000641947 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
PHGDH-232ENST00000641947 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
PHGDH-232ENST00000641947 ZNF644Q9H582 1327 aaPredicted RBP26.4■■□□□ 1.82
PHGDH-232ENST00000641947 CAMSAP2Q08AD1 1489 aa26.4■■□□□ 1.82
PHGDH-232ENST00000641947 DNMT1P26358 1616 aaKnown RBP26.39■■□□□ 1.82
PHGDH-232ENST00000641947 CCER1Q8TC90 406 aaPredicted RBP26.39■■□□□ 1.82
PHGDH-232ENST00000641947 MYO5CQ9NQX4 1742 aa26.36■■□□□ 1.81
PHGDH-232ENST00000641947 RAB3GAP2Q9H2M9 1393 aa26.34■■□□□ 1.81
PHGDH-232ENST00000641947 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms