RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CTTNBP2Q8WZ74 1663 aa28.17■■■□□ 2.1
PHGDH-230ENST00000641927 RANGAP1P46060 587 aaPredicted RBP28.16■■■□□ 2.1
PHGDH-230ENST00000641927 NUP160Q12769 1436 aa28.16■■■□□ 2.1
PHGDH-230ENST00000641927 KIAA0586Q9BVV6 1533 aa28.1■■■□□ 2.09
PHGDH-230ENST00000641927 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
PHGDH-230ENST00000641927 OSCARQ8IYS5 282 aa28.07■■■□□ 2.08
PHGDH-230ENST00000641927 CEP162Q5TB80 1403 aa28.03■■■□□ 2.08
PHGDH-230ENST00000641927 CLIP1P30622 1438 aa27.98■■■□□ 2.07
PHGDH-230ENST00000641927 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
PHGDH-230ENST00000641927 JPH4Q96JJ6 628 aa27.96■■■□□ 2.07
PHGDH-230ENST00000641927 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
PHGDH-230ENST00000641927 P3H3Q8IVL6 736 aa27.89■■■□□ 2.06
PHGDH-230ENST00000641927 ARHGAP35Q9NRY4 1499 aa27.87■■■□□ 2.05
PHGDH-230ENST00000641927 EFCAB5A4FU69 1503 aa27.86■■■□□ 2.05
PHGDH-230ENST00000641927 SHROOM2Q13796 1616 aa27.84■■■□□ 2.05
PHGDH-230ENST00000641927 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
PHGDH-230ENST00000641927 SAMD9Q5K651 1589 aa27.83■■■□□ 2.05
PHGDH-230ENST00000641927 CARMIL2Q6F5E8 1435 aa27.81■■■□□ 2.04
PHGDH-230ENST00000641927 DISP1Q96F81 1524 aa27.81■■■□□ 2.04
PHGDH-230ENST00000641927 KIAA0556O60303 1618 aa27.79■■■□□ 2.04
PHGDH-230ENST00000641927 FHOD3Q2V2M9 1422 aa27.78■■■□□ 2.04
PHGDH-230ENST00000641927 ARAP1Q96P48 1450 aa27.76■■■□□ 2.03
PHGDH-230ENST00000641927 TTBK1Q5TCY1 1321 aaPredicted RBP27.75■■■□□ 2.03
PHGDH-230ENST00000641927 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
PHGDH-230ENST00000641927 FMN1Q68DA7 1419 aa27.62■■■□□ 2.01
PHGDH-230ENST00000641927 VPS8Q8N3P4 1428 aa27.62■■■□□ 2.01
PHGDH-230ENST00000641927 PTPRGP23470 1445 aa27.6■■■□□ 2.01
PHGDH-230ENST00000641927 ARHGEF11O15085 1522 aa27.58■■■□□ 2
PHGDH-230ENST00000641927 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
PHGDH-230ENST00000641927 PCF11O94913 1555 aaKnown RBP27.5■■□□□ 1.99
PHGDH-230ENST00000641927 RIMBP3CA6NJZ7 1639 aa27.5■■□□□ 1.99
PHGDH-230ENST00000641927 RIMBP3BA6NNM3 1639 aa27.5■■□□□ 1.99
PHGDH-230ENST00000641927 RIMBP3Q9UFD9 1639 aa27.5■■□□□ 1.99
PHGDH-230ENST00000641927 PLB1Q6P1J6 1458 aa27.48■■□□□ 1.99
PHGDH-230ENST00000641927 CASKIN1Q8WXD9 1431 aa27.47■■□□□ 1.99
PHGDH-230ENST00000641927 FYCO1Q9BQS8 1478 aa27.45■■□□□ 1.99
PHGDH-230ENST00000641927 RAPGEF6Q8TEU7 1601 aa27.45■■□□□ 1.98
PHGDH-230ENST00000641927 UACAQ9BZF9 1416 aa27.42■■□□□ 1.98
PHGDH-230ENST00000641927 ARID3CA6NKF2 412 aa27.41■■□□□ 1.98
PHGDH-230ENST00000641927 APLP2Q06481 763 aa27.41■■□□□ 1.98
PHGDH-230ENST00000641927 ABCA8O94911 1581 aa27.41■■□□□ 1.98
PHGDH-230ENST00000641927 HECW1Q76N89 1606 aa27.41■■□□□ 1.98
PHGDH-230ENST00000641927 CYB5RLQ6IPT4 315 aa27.37■■□□□ 1.97
PHGDH-230ENST00000641927 NUP153P49790 1475 aaKnown RBP27.35■■□□□ 1.97
PHGDH-230ENST00000641927 ABCC2Q92887 1545 aa27.34■■□□□ 1.97
PHGDH-230ENST00000641927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.33■■□□□ 1.97
PHGDH-230ENST00000641927 HNRNPUL2Q1KMD3 747 aaKnown RBP27.33■■□□□ 1.97
PHGDH-230ENST00000641927 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
PHGDH-230ENST00000641927 EPRSP07814 1512 aaKnown RBP27.3■■□□□ 1.96
PHGDH-230ENST00000641927 UHRF1BP1LA0JNW5 1464 aa27.29■■□□□ 1.96
PHGDH-230ENST00000641927 LRRIQ1Q96JM4 1722 aa27.29■■□□□ 1.96
PHGDH-230ENST00000641927 CCDC18Q5T9S5 1454 aa27.29■■□□□ 1.96
PHGDH-230ENST00000641927 ADCY10Q96PN6 1610 aa27.28■■□□□ 1.96
PHGDH-230ENST00000641927 CDK13Q14004 1512 aaKnown RBP27.28■■□□□ 1.96
PHGDH-230ENST00000641927 PPARGC1BQ86YN6 1023 aaKnown RBP27.26■■□□□ 1.95
PHGDH-230ENST00000641927 TIAM1Q13009 1591 aa27.25■■□□□ 1.95
PHGDH-230ENST00000641927 ATP10BO94823 1461 aa27.23■■□□□ 1.95
PHGDH-230ENST00000641927 CFAP43Q8NDM7 1665 aa27.23■■□□□ 1.95
PHGDH-230ENST00000641927 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
PHGDH-230ENST00000641927 NPM1P06748 294 aaKnown RBP eCLIP27.19■■□□□ 1.94
PHGDH-230ENST00000641927 KANK4Q5T7N3 995 aaPredicted RBP27.17■■□□□ 1.94
PHGDH-230ENST00000641927 KDM5BQ9UGL1 1544 aa27.17■■□□□ 1.94
PHGDH-230ENST00000641927 ZCCHC11Q5TAX3 1644 aaKnown RBP27.17■■□□□ 1.94
PHGDH-230ENST00000641927 CDK11AQ9UQ88 783 aaPredicted RBP27.17■■□□□ 1.94
PHGDH-230ENST00000641927 MTUS2Q5JR59 1369 aa27.15■■□□□ 1.94
PHGDH-230ENST00000641927 LRRC9Q6ZRR7 1453 aa27.14■■□□□ 1.93
PHGDH-230ENST00000641927 PLEKHD1A6NEE1 506 aa27.12■■□□□ 1.93
PHGDH-230ENST00000641927 MAGI3Q5TCQ9 1506 aa27.09■■□□□ 1.93
PHGDH-230ENST00000641927 EHBP1L1Q8N3D4 1523 aa27.07■■□□□ 1.92
PHGDH-230ENST00000641927 TROQ12816 1431 aaPredicted RBP27.04■■□□□ 1.92
PHGDH-230ENST00000641927 ASXL2Q76L83 1435 aa27■■□□□ 1.91
PHGDH-230ENST00000641927 KCNH8Q96L42 1107 aa26.99■■□□□ 1.91
PHGDH-230ENST00000641927 WDR7Q9Y4E6 1490 aa26.97■■□□□ 1.91
PHGDH-230ENST00000641927 SUPT6HQ7KZ85 1726 aaKnown RBP26.97■■□□□ 1.91
PHGDH-230ENST00000641927 KIF14Q15058 1648 aa26.94■■□□□ 1.9
PHGDH-230ENST00000641927 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
PHGDH-230ENST00000641927 MAPKBP1O60336 1514 aa26.93■■□□□ 1.9
PHGDH-230ENST00000641927 PHLDB1Q86UU1 1377 aa26.85■■□□□ 1.89
PHGDH-230ENST00000641927 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
PHGDH-230ENST00000641927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.82■■□□□ 1.88
PHGDH-230ENST00000641927 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
PHGDH-230ENST00000641927 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
PHGDH-230ENST00000641927 MYOM3Q5VTT5 1437 aa26.78■■□□□ 1.88
PHGDH-230ENST00000641927 GPATCH8Q9UKJ3 1502 aaKnown RBP26.74■■□□□ 1.87
PHGDH-230ENST00000641927 FAM69CQ0P6D2 419 aa26.73■■□□□ 1.87
PHGDH-230ENST00000641927 ABCA9Q8IUA7 1624 aa26.73■■□□□ 1.87
PHGDH-230ENST00000641927 ITSN2Q9NZM3 1697 aa26.73■■□□□ 1.87
PHGDH-230ENST00000641927 CDC42BPAQ5VT25 1732 aa26.72■■□□□ 1.87
PHGDH-230ENST00000641927 CFDP1Q9UEE9 299 aaPredicted RBP26.72■■□□□ 1.87
PHGDH-230ENST00000641927 FGD6Q6ZV73 1430 aa26.71■■□□□ 1.87
PHGDH-230ENST00000641927 MYO5CQ9NQX4 1742 aa26.71■■□□□ 1.87
PHGDH-230ENST00000641927 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
PHGDH-230ENST00000641927 TRIM26Q12899 539 aaPredicted RBP26.68■■□□□ 1.86
PHGDH-230ENST00000641927 ZNF777Q9ULD5 760 aaPredicted RBP26.68■■□□□ 1.86
PHGDH-230ENST00000641927 PREX2Q70Z35 1606 aa26.67■■□□□ 1.86
PHGDH-230ENST00000641927 GLI2P10070 1586 aa26.67■■□□□ 1.86
PHGDH-230ENST00000641927 ARHGAP5Q13017 1502 aa26.67■■□□□ 1.86
PHGDH-230ENST00000641927 FAM50AQ14320 339 aaKnown RBP26.66■■□□□ 1.86
PHGDH-230ENST00000641927 PLCH2O75038 1416 aa26.66■■□□□ 1.86
PHGDH-230ENST00000641927 CD109Q6YHK3 1445 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms