RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 RIMBP3BA6NNM3 1639 aa10.91□□□□□ -0.66
CASC19-246ENST00000641625 RIMBP3Q9UFD9 1639 aa10.91□□□□□ -0.66
CASC19-246ENST00000641625 IGF1RP08069 1367 aa10.9□□□□□ -0.66
CASC19-246ENST00000641625 NUP160Q12769 1436 aa10.89□□□□□ -0.67
CASC19-246ENST00000641625 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
CASC19-246ENST00000641625 CYB5RLQ6IPT4 315 aa10.85□□□□□ -0.67
CASC19-246ENST00000641625 ARAP1Q96P48 1450 aa10.84□□□□□ -0.67
CASC19-246ENST00000641625 CUL7Q14999 1698 aa10.83□□□□□ -0.68
CASC19-246ENST00000641625 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.68
CASC19-246ENST00000641625 RUSC2Q8N2Y8 1516 aa10.82□□□□□ -0.68
CASC19-246ENST00000641625 JPH4Q96JJ6 628 aa10.78□□□□□ -0.68
CASC19-246ENST00000641625 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
CASC19-246ENST00000641625 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.68
CASC19-246ENST00000641625 KIAA0586Q9BVV6 1533 aa10.77□□□□□ -0.69
CASC19-246ENST00000641625 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.69
CASC19-246ENST00000641625 RAPGEF2Q9Y4G8 1499 aa10.75□□□□□ -0.69
CASC19-246ENST00000641625 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
CASC19-246ENST00000641625 IQGAP2Q13576 1575 aa10.7□□□□□ -0.7
CASC19-246ENST00000641625 CSRNP3Q8WYN3 585 aa10.69□□□□□ -0.7
CASC19-246ENST00000641625 EEA1Q15075 1411 aa10.69□□□□□ -0.7
CASC19-246ENST00000641625 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
CASC19-246ENST00000641625 FAM9AQ8IZU1 332 aaPredicted RBP10.67□□□□□ -0.7
CASC19-246ENST00000641625 CARMIL2Q6F5E8 1435 aa10.66□□□□□ -0.7
CASC19-246ENST00000641625 MAPK8IP2Q13387 824 aaPredicted RBP10.66□□□□□ -0.7
CASC19-246ENST00000641625 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.7
CASC19-246ENST00000641625 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
CASC19-246ENST00000641625 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
CASC19-246ENST00000641625 DISP1Q96F81 1524 aa10.63□□□□□ -0.71
CASC19-246ENST00000641625 CACNB1Q02641 598 aaPredicted RBP10.63□□□□□ -0.71
CASC19-246ENST00000641625 TNIKQ9UKE5 1360 aa10.63□□□□□ -0.71
CASC19-246ENST00000641625 PTPRGP23470 1445 aa10.63□□□□□ -0.71
CASC19-246ENST00000641625 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
CASC19-246ENST00000641625 KCNA4P22459 653 aa10.61□□□□□ -0.71
CASC19-246ENST00000641625 CTTNBP2Q8WZ74 1663 aa10.61□□□□□ -0.71
CASC19-246ENST00000641625 KIAA0556O60303 1618 aa10.59□□□□□ -0.71
CASC19-246ENST00000641625 ADCY10Q96PN6 1610 aa10.58□□□□□ -0.72
CASC19-246ENST00000641625 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
CASC19-246ENST00000641625 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
CASC19-246ENST00000641625 KIF21BO75037 1637 aa10.56□□□□□ -0.72
CASC19-246ENST00000641625 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
CASC19-246ENST00000641625 ABCC2Q92887 1545 aa10.54□□□□□ -0.72
CASC19-246ENST00000641625 UHRF1BP1LA0JNW5 1464 aa10.54□□□□□ -0.72
CASC19-246ENST00000641625 MAPKBP1O60336 1514 aa10.54□□□□□ -0.72
CASC19-246ENST00000641625 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.73
CASC19-246ENST00000641625 P3H3Q8IVL6 736 aa10.52□□□□□ -0.73
CASC19-246ENST00000641625 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
CASC19-246ENST00000641625 PLB1Q6P1J6 1458 aa10.51□□□□□ -0.73
CASC19-246ENST00000641625 SAMD9Q5K651 1589 aa10.5□□□□□ -0.73
CASC19-246ENST00000641625 ABCC10Q5T3U5 1492 aa10.5□□□□□ -0.73
CASC19-246ENST00000641625 FAM69CQ0P6D2 419 aa10.49□□□□□ -0.73
CASC19-246ENST00000641625 KDM5BQ9UGL1 1544 aa10.49□□□□□ -0.73
CASC19-246ENST00000641625 ASXL2Q76L83 1435 aa10.48□□□□□ -0.73
CASC19-246ENST00000641625 ABCA8O94911 1581 aa10.48□□□□□ -0.73
CASC19-246ENST00000641625 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
CASC19-246ENST00000641625 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
CASC19-246ENST00000641625 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
CASC19-246ENST00000641625 KIF13AQ9H1H9 1805 aa10.45□□□□□ -0.74
CASC19-246ENST00000641625 ZCCHC11Q5TAX3 1644 aaKnown RBP10.45□□□□□ -0.74
CASC19-246ENST00000641625 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
CASC19-246ENST00000641625 ARID3CA6NKF2 412 aa10.44□□□□□ -0.74
CASC19-246ENST00000641625 WDR7Q9Y4E6 1490 aa10.42□□□□□ -0.74
CASC19-246ENST00000641625 ARHGAP35Q9NRY4 1499 aa10.41□□□□□ -0.74
CASC19-246ENST00000641625 EPRSP07814 1512 aaKnown RBP10.41□□□□□ -0.74
CASC19-246ENST00000641625 ATP10BO94823 1461 aa10.4□□□□□ -0.74
CASC19-246ENST00000641625 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
CASC19-246ENST00000641625 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.75
CASC19-246ENST00000641625 GLI2P10070 1586 aa10.39□□□□□ -0.75
CASC19-246ENST00000641625 FMN1Q68DA7 1419 aa10.38□□□□□ -0.75
CASC19-246ENST00000641625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
CASC19-246ENST00000641625 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
CASC19-246ENST00000641625 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
CASC19-246ENST00000641625 CLIP1P30622 1438 aa10.35□□□□□ -0.75
CASC19-246ENST00000641625 TSPOAP1O95153 1857 aa10.35□□□□□ -0.75
CASC19-246ENST00000641625 MAP3K4Q9Y6R4 1608 aa10.34□□□□□ -0.75
CASC19-246ENST00000641625 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
CASC19-246ENST00000641625 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
CASC19-246ENST00000641625 PPRC1Q5VV67 1664 aaKnown RBP10.32□□□□□ -0.76
CASC19-246ENST00000641625 PLEKHD1A6NEE1 506 aa10.32□□□□□ -0.76
CASC19-246ENST00000641625 TEX14Q8IWB6 1497 aa10.32□□□□□ -0.76
CASC19-246ENST00000641625 CDK13Q14004 1512 aaKnown RBP10.31□□□□□ -0.76
CASC19-246ENST00000641625 KDM6BO15054 1643 aa10.31□□□□□ -0.76
CASC19-246ENST00000641625 HECW1Q76N89 1606 aa10.31□□□□□ -0.76
CASC19-246ENST00000641625 MAGI3Q5TCQ9 1506 aa10.3□□□□□ -0.76
CASC19-246ENST00000641625 LOC105371045A0A1W2PR82 267 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 DCAF8L1A6NGE4 600 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 CEP162Q5TB80 1403 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 CASKIN1Q8WXD9 1431 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 CFAP43Q8NDM7 1665 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 PCF11O94913 1555 aaKnown RBP10.28□□□□□ -0.76
CASC19-246ENST00000641625 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
CASC19-246ENST00000641625 ABCA9Q8IUA7 1624 aa10.27□□□□□ -0.76
CASC19-246ENST00000641625 SLC4A1APQ9BWU0 796 aaKnown RBP10.27□□□□□ -0.77
CASC19-246ENST00000641625 CDK11AQ9UQ88 783 aaPredicted RBP10.26□□□□□ -0.77
CASC19-246ENST00000641625 FYCO1Q9BQS8 1478 aa10.25□□□□□ -0.77
CASC19-246ENST00000641625 CCDC18Q5T9S5 1454 aa10.25□□□□□ -0.77
CASC19-246ENST00000641625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.24□□□□□ -0.77
CASC19-246ENST00000641625 TROQ12816 1431 aaPredicted RBP10.24□□□□□ -0.77
CASC19-246ENST00000641625 TTC37Q6PGP7 1564 aa10.23□□□□□ -0.77
CASC19-246ENST00000641625 RNF39Q9H2S5 420 aa10.22□□□□□ -0.77
CASC19-246ENST00000641625 PHLDB1Q86UU1 1377 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms