RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 CUL7Q14999 1698 aa14.2□□□□□ -0.14
HLA-B-258ENST00000640615 CYB5RLQ6IPT4 315 aa14.2□□□□□ -0.14
HLA-B-258ENST00000640615 FBLN2P98095 1184 aa14.19□□□□□ -0.14
HLA-B-258ENST00000640615 CHMP7Q8WUX9 453 aaPredicted RBP14.19□□□□□ -0.14
HLA-B-258ENST00000640615 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
HLA-B-258ENST00000640615 SYNJ2O15056 1496 aa14.15□□□□□ -0.14
HLA-B-258ENST00000640615 TNIKQ9UKE5 1360 aa14.13□□□□□ -0.15
HLA-B-258ENST00000640615 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
HLA-B-258ENST00000640615 RANGAP1P46060 587 aaPredicted RBP14.09□□□□□ -0.15
HLA-B-258ENST00000640615 NUP160Q12769 1436 aa14.02□□□□□ -0.16
HLA-B-258ENST00000640615 CEP162Q5TB80 1403 aa14.02□□□□□ -0.16
HLA-B-258ENST00000640615 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
HLA-B-258ENST00000640615 CEP170Q5SW79 1584 aa14□□□□□ -0.17
HLA-B-258ENST00000640615 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
HLA-B-258ENST00000640615 CLIP1P30622 1438 aa13.98□□□□□ -0.17
HLA-B-258ENST00000640615 CTTNBP2Q8WZ74 1663 aa13.98□□□□□ -0.17
HLA-B-258ENST00000640615 SHROOM2Q13796 1616 aa13.97□□□□□ -0.17
HLA-B-258ENST00000640615 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
HLA-B-258ENST00000640615 P3H3Q8IVL6 736 aa13.95□□□□□ -0.18
HLA-B-258ENST00000640615 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
HLA-B-258ENST00000640615 ERCC6L2Q5T890 1561 aa13.95□□□□□ -0.18
HLA-B-258ENST00000640615 ARHGAP35Q9NRY4 1499 aa13.91□□□□□ -0.18
HLA-B-258ENST00000640615 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.18
HLA-B-258ENST00000640615 EFCAB5A4FU69 1503 aa13.88□□□□□ -0.19
HLA-B-258ENST00000640615 FHOD3Q2V2M9 1422 aa13.87□□□□□ -0.19
HLA-B-258ENST00000640615 PRG4Q92954 1404 aaPredicted RBP13.87□□□□□ -0.19
HLA-B-258ENST00000640615 CARMIL2Q6F5E8 1435 aa13.86□□□□□ -0.19
HLA-B-258ENST00000640615 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
HLA-B-258ENST00000640615 SAMD9Q5K651 1589 aa13.85□□□□□ -0.19
HLA-B-258ENST00000640615 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
HLA-B-258ENST00000640615 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
HLA-B-258ENST00000640615 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
HLA-B-258ENST00000640615 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
HLA-B-258ENST00000640615 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
HLA-B-258ENST00000640615 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
HLA-B-258ENST00000640615 PTPRGP23470 1445 aa13.76□□□□□ -0.21
HLA-B-258ENST00000640615 APLP2Q06481 763 aa13.74□□□□□ -0.21
HLA-B-258ENST00000640615 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
HLA-B-258ENST00000640615 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
HLA-B-258ENST00000640615 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
HLA-B-258ENST00000640615 ADCY10Q96PN6 1610 aa13.7□□□□□ -0.22
HLA-B-258ENST00000640615 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
HLA-B-258ENST00000640615 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
HLA-B-258ENST00000640615 ARID3CA6NKF2 412 aa13.69□□□□□ -0.22
HLA-B-258ENST00000640615 PCF11O94913 1555 aaKnown RBP13.69□□□□□ -0.22
HLA-B-258ENST00000640615 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
HLA-B-258ENST00000640615 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
HLA-B-258ENST00000640615 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
HLA-B-258ENST00000640615 UACAQ9BZF9 1416 aa13.66□□□□□ -0.22
HLA-B-258ENST00000640615 RAPGEF6Q8TEU7 1601 aa13.65□□□□□ -0.22
HLA-B-258ENST00000640615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
HLA-B-258ENST00000640615 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
HLA-B-258ENST00000640615 ABCA8O94911 1581 aa13.64□□□□□ -0.23
HLA-B-258ENST00000640615 NUP153P49790 1475 aaKnown RBP13.63□□□□□ -0.23
HLA-B-258ENST00000640615 HECW1Q76N89 1606 aa13.63□□□□□ -0.23
HLA-B-258ENST00000640615 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
HLA-B-258ENST00000640615 KANK4Q5T7N3 995 aaPredicted RBP13.61□□□□□ -0.23
HLA-B-258ENST00000640615 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
HLA-B-258ENST00000640615 UHRF1BP1LA0JNW5 1464 aa13.6□□□□□ -0.23
HLA-B-258ENST00000640615 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
HLA-B-258ENST00000640615 ABCC2Q92887 1545 aa13.59□□□□□ -0.23
HLA-B-258ENST00000640615 TIAM1Q13009 1591 aa13.59□□□□□ -0.23
HLA-B-258ENST00000640615 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
HLA-B-258ENST00000640615 CDK13Q14004 1512 aaKnown RBP13.59□□□□□ -0.23
HLA-B-258ENST00000640615 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
HLA-B-258ENST00000640615 CDK11AQ9UQ88 783 aaPredicted RBP13.58□□□□□ -0.24
HLA-B-258ENST00000640615 ATP10BO94823 1461 aa13.58□□□□□ -0.24
HLA-B-258ENST00000640615 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
HLA-B-258ENST00000640615 LRRC9Q6ZRR7 1453 aa13.55□□□□□ -0.24
HLA-B-258ENST00000640615 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
HLA-B-258ENST00000640615 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
HLA-B-258ENST00000640615 CFAP43Q8NDM7 1665 aa13.54□□□□□ -0.24
HLA-B-258ENST00000640615 GLI2P10070 1586 aa13.54□□□□□ -0.24
HLA-B-258ENST00000640615 KDM6BO15054 1643 aa13.53□□□□□ -0.24
HLA-B-258ENST00000640615 KDM5BQ9UGL1 1544 aa13.53□□□□□ -0.24
HLA-B-258ENST00000640615 PPRC1Q5VV67 1664 aaKnown RBP13.5□□□□□ -0.25
HLA-B-258ENST00000640615 MAGI3Q5TCQ9 1506 aa13.49□□□□□ -0.25
HLA-B-258ENST00000640615 TROQ12816 1431 aaPredicted RBP13.49□□□□□ -0.25
HLA-B-258ENST00000640615 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
HLA-B-258ENST00000640615 EHBP1L1Q8N3D4 1523 aa13.49□□□□□ -0.25
HLA-B-258ENST00000640615 TSPOAP1O95153 1857 aa13.48□□□□□ -0.25
HLA-B-258ENST00000640615 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
HLA-B-258ENST00000640615 KCNH8Q96L42 1107 aa13.47□□□□□ -0.25
HLA-B-258ENST00000640615 KDM4FA0A1W2PPD8 638 aa13.45□□□□□ -0.26
HLA-B-258ENST00000640615 NCOA2Q15596 1464 aa13.44□□□□□ -0.26
HLA-B-258ENST00000640615 MAP3K4Q9Y6R4 1608 aa13.44□□□□□ -0.26
HLA-B-258ENST00000640615 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
HLA-B-258ENST00000640615 WDR7Q9Y4E6 1490 aa13.42□□□□□ -0.26
HLA-B-258ENST00000640615 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
HLA-B-258ENST00000640615 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
HLA-B-258ENST00000640615 CCNB3Q8WWL7 1395 aa13.4□□□□□ -0.26
HLA-B-258ENST00000640615 KIF14Q15058 1648 aa13.39□□□□□ -0.27
HLA-B-258ENST00000640615 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
HLA-B-258ENST00000640615 MYOM3Q5VTT5 1437 aa13.37□□□□□ -0.27
HLA-B-258ENST00000640615 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
HLA-B-258ENST00000640615 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
HLA-B-258ENST00000640615 PCGF6Q9BYE7 350 aa13.35□□□□□ -0.27
HLA-B-258ENST00000640615 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
HLA-B-258ENST00000640615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.34□□□□□ -0.27
HLA-B-258ENST00000640615 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms