RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
HNRNPU-229ENST00000640440 PRG4Q92954 1404 aaPredicted RBP24.84■■□□□ 1.57
HNRNPU-229ENST00000640440 JPH4Q96JJ6 628 aa24.81■■□□□ 1.56
HNRNPU-229ENST00000640440 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
HNRNPU-229ENST00000640440 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
HNRNPU-229ENST00000640440 KIAA0586Q9BVV6 1533 aa24.76■■□□□ 1.55
HNRNPU-229ENST00000640440 IQGAP2Q13576 1575 aa24.62■■□□□ 1.53
HNRNPU-229ENST00000640440 RAPGEF2Q9Y4G8 1499 aa24.59■■□□□ 1.53
HNRNPU-229ENST00000640440 ADCY10Q96PN6 1610 aa24.57■■□□□ 1.52
HNRNPU-229ENST00000640440 KIF13AQ9H1H9 1805 aa24.54■■□□□ 1.52
HNRNPU-229ENST00000640440 CARMIL2Q6F5E8 1435 aa24.51■■□□□ 1.51
HNRNPU-229ENST00000640440 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
HNRNPU-229ENST00000640440 PTPRGP23470 1445 aa24.47■■□□□ 1.51
HNRNPU-229ENST00000640440 TTBK1Q5TCY1 1321 aaPredicted RBP24.46■■□□□ 1.51
HNRNPU-229ENST00000640440 TNIKQ9UKE5 1360 aa24.45■■□□□ 1.5
HNRNPU-229ENST00000640440 NPM1P06748 294 aaKnown RBP eCLIP24.45■■□□□ 1.5
HNRNPU-229ENST00000640440 MAPKBP1O60336 1514 aa24.45■■□□□ 1.5
HNRNPU-229ENST00000640440 DISP1Q96F81 1524 aa24.45■■□□□ 1.5
HNRNPU-229ENST00000640440 UGGT2Q9NYU1 1516 aa24.44■■□□□ 1.5
HNRNPU-229ENST00000640440 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
HNRNPU-229ENST00000640440 KIAA0556O60303 1618 aa24.4■■□□□ 1.5
HNRNPU-229ENST00000640440 ABCC10Q5T3U5 1492 aa24.38■■□□□ 1.49
HNRNPU-229ENST00000640440 DIP2BQ9P265 1576 aa24.37■■□□□ 1.49
HNRNPU-229ENST00000640440 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
HNRNPU-229ENST00000640440 ABCC2Q92887 1545 aa24.33■■□□□ 1.49
HNRNPU-229ENST00000640440 UACAQ9BZF9 1416 aa24.3■■□□□ 1.48
HNRNPU-229ENST00000640440 UHRF1BP1LA0JNW5 1464 aa24.3■■□□□ 1.48
HNRNPU-229ENST00000640440 TSPOAP1O95153 1857 aa24.29■■□□□ 1.48
HNRNPU-229ENST00000640440 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
HNRNPU-229ENST00000640440 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
HNRNPU-229ENST00000640440 EEA1Q15075 1411 aa24.23■■□□□ 1.47
HNRNPU-229ENST00000640440 ZCCHC11Q5TAX3 1644 aaKnown RBP24.21■■□□□ 1.47
HNRNPU-229ENST00000640440 ASXL2Q76L83 1435 aa24.21■■□□□ 1.47
HNRNPU-229ENST00000640440 KDM5BQ9UGL1 1544 aa24.2■■□□□ 1.46
HNRNPU-229ENST00000640440 PLB1Q6P1J6 1458 aa24.19■■□□□ 1.46
HNRNPU-229ENST00000640440 FAM9AQ8IZU1 332 aaPredicted RBP24.15■■□□□ 1.46
HNRNPU-229ENST00000640440 ABCA8O94911 1581 aa24.13■■□□□ 1.45
HNRNPU-229ENST00000640440 GLI2P10070 1586 aa24.12■■□□□ 1.45
HNRNPU-229ENST00000640440 SAMD9Q5K651 1589 aa24.1■■□□□ 1.45
HNRNPU-229ENST00000640440 PPRC1Q5VV67 1664 aaKnown RBP24.09■■□□□ 1.45
HNRNPU-229ENST00000640440 KDM6BO15054 1643 aa24.09■■□□□ 1.45
HNRNPU-229ENST00000640440 KIF21BO75037 1637 aa24.08■■□□□ 1.45
HNRNPU-229ENST00000640440 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
HNRNPU-229ENST00000640440 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
HNRNPU-229ENST00000640440 MAP3K4Q9Y6R4 1608 aa24.04■■□□□ 1.44
HNRNPU-229ENST00000640440 WDR7Q9Y4E6 1490 aa24.04■■□□□ 1.44
HNRNPU-229ENST00000640440 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
HNRNPU-229ENST00000640440 RAPGEF6Q8TEU7 1601 aa23.95■■□□□ 1.43
HNRNPU-229ENST00000640440 ARID3CA6NKF2 412 aa23.94■■□□□ 1.42
HNRNPU-229ENST00000640440 FHOD3Q2V2M9 1422 aa23.93■■□□□ 1.42
HNRNPU-229ENST00000640440 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
HNRNPU-229ENST00000640440 TEX14Q8IWB6 1497 aa23.91■■□□□ 1.42
HNRNPU-229ENST00000640440 ATP10BO94823 1461 aa23.9■■□□□ 1.42
HNRNPU-229ENST00000640440 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
HNRNPU-229ENST00000640440 EFCAB5A4FU69 1503 aa23.89■■□□□ 1.42
HNRNPU-229ENST00000640440 KCNH8Q96L42 1107 aa23.89■■□□□ 1.41
HNRNPU-229ENST00000640440 CD109Q6YHK3 1445 aa23.84■■□□□ 1.41
HNRNPU-229ENST00000640440 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.41
HNRNPU-229ENST00000640440 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
HNRNPU-229ENST00000640440 COL17A1Q9UMD9 1497 aaPredicted RBP23.82■■□□□ 1.4
HNRNPU-229ENST00000640440 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
HNRNPU-229ENST00000640440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
HNRNPU-229ENST00000640440 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
HNRNPU-229ENST00000640440 ABCA9Q8IUA7 1624 aa23.77■■□□□ 1.4
HNRNPU-229ENST00000640440 ARHGAP35Q9NRY4 1499 aa23.71■■□□□ 1.39
HNRNPU-229ENST00000640440 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
HNRNPU-229ENST00000640440 KDM4FA0A1W2PPD8 638 aa23.65■■□□□ 1.38
HNRNPU-229ENST00000640440 HECW1Q76N89 1606 aa23.65■■□□□ 1.38
HNRNPU-229ENST00000640440 FMN1Q68DA7 1419 aa23.64■■□□□ 1.37
HNRNPU-229ENST00000640440 PLEKHD1A6NEE1 506 aa23.63■■□□□ 1.37
HNRNPU-229ENST00000640440 ARAP3Q8WWN8 1544 aa23.62■■□□□ 1.37
HNRNPU-229ENST00000640440 ADGRL1O94910 1474 aa23.59■■□□□ 1.37
HNRNPU-229ENST00000640440 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
HNRNPU-229ENST00000640440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.58■■□□□ 1.365e-10■■■□□ 14.8
HNRNPU-229ENST00000640440 TTC37Q6PGP7 1564 aa23.57■■□□□ 1.36
HNRNPU-229ENST00000640440 NEO1Q92859 1461 aa23.57■■□□□ 1.36
HNRNPU-229ENST00000640440 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
HNRNPU-229ENST00000640440 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
HNRNPU-229ENST00000640440 CFAP74Q9C0B2 1584 aa23.52■■□□□ 1.36
HNRNPU-229ENST00000640440 PCF11O94913 1555 aaKnown RBP23.5■■□□□ 1.35
HNRNPU-229ENST00000640440 FRMPD1Q5SYB0 1578 aa23.5■■□□□ 1.35
HNRNPU-229ENST00000640440 FANCAO15360 1455 aa23.48■■□□□ 1.35
HNRNPU-229ENST00000640440 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
HNRNPU-229ENST00000640440 KIF14Q15058 1648 aa23.46■■□□□ 1.35
HNRNPU-229ENST00000640440 RICTORQ6R327 1708 aa23.46■■□□□ 1.35
HNRNPU-229ENST00000640440 MYO5CQ9NQX4 1742 aa23.46■■□□□ 1.35
HNRNPU-229ENST00000640440 AKNAQ7Z591 1439 aa23.44■■□□□ 1.34
HNRNPU-229ENST00000640440 CLIP1P30622 1438 aa23.43■■□□□ 1.34
HNRNPU-229ENST00000640440 CASKIN1Q8WXD9 1431 aa23.43■■□□□ 1.34
HNRNPU-229ENST00000640440 CDK11AQ9UQ88 783 aaPredicted RBP23.43■■□□□ 1.34
HNRNPU-229ENST00000640440 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
HNRNPU-229ENST00000640440 DENND4BO75064 1496 aaPredicted RBP23.41■■□□□ 1.34
HNRNPU-229ENST00000640440 PLCH2O75038 1416 aa23.39■■□□□ 1.33
HNRNPU-229ENST00000640440 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
HNRNPU-229ENST00000640440 FYCO1Q9BQS8 1478 aa23.37■■□□□ 1.33
HNRNPU-229ENST00000640440 ARHGEF40Q8TER5 1519 aa23.36■■□□□ 1.33
HNRNPU-229ENST00000640440 ZMYM4Q5VZL5 1548 aa23.33■■□□□ 1.32
HNRNPU-229ENST00000640440 CDC42BPBQ9Y5S2 1711 aa23.31■■□□□ 1.32
HNRNPU-229ENST00000640440 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
HNRNPU-229ENST00000640440 SCAPERQ9BY12 1400 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms