RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 SALL2Q9Y467 1007 aaPredicted RBP11.51□□□□□ -0.57
HNRNPU-222ENST00000639880 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
HNRNPU-222ENST00000639880 SUPT16HQ9Y5B9 1047 aaKnown RBP11.5□□□□□ -0.57
HNRNPU-222ENST00000639880 EIF4G2P78344 907 aaKnown RBP eCLIP11.5□□□□□ -0.57
HNRNPU-222ENST00000639880 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
HNRNPU-222ENST00000639880 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
HNRNPU-222ENST00000639880 SMARCA2P51531 1590 aa11.46□□□□□ -0.58
HNRNPU-222ENST00000639880 RAB3GAP2Q9H2M9 1393 aa11.45□□□□□ -0.58
HNRNPU-222ENST00000639880 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
HNRNPU-222ENST00000639880 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
HNRNPU-222ENST00000639880 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
HNRNPU-222ENST00000639880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.582e-14■■□□□ 13.7
HNRNPU-222ENST00000639880 FHAD1B1AJZ9 1412 aa11.42□□□□□ -0.58
HNRNPU-222ENST00000639880 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
HNRNPU-222ENST00000639880 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
HNRNPU-222ENST00000639880 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
HNRNPU-222ENST00000639880 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
HNRNPU-222ENST00000639880 DHX57Q6P158 1386 aaKnown RBP11.4□□□□□ -0.58
HNRNPU-222ENST00000639880 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.58
HNRNPU-222ENST00000639880 CCDC136Q96JN2 1154 aa11.4□□□□□ -0.58
HNRNPU-222ENST00000639880 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
HNRNPU-222ENST00000639880 CFDP1Q9UEE9 299 aaPredicted RBP11.36□□□□□ -0.59
HNRNPU-222ENST00000639880 FOXD1Q16676 465 aa11.36□□□□□ -0.59
HNRNPU-222ENST00000639880 TIMELESSQ9UNS1 1208 aa11.35□□□□□ -0.59
HNRNPU-222ENST00000639880 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
HNRNPU-222ENST00000639880 TDRD9Q8NDG6 1382 aaKnown RBP11.34□□□□□ -0.59
HNRNPU-222ENST00000639880 ARHGAP35Q9NRY4 1499 aa11.34□□□□□ -0.59
HNRNPU-222ENST00000639880 PPP1R15AO75807 674 aaPredicted RBP11.33□□□□□ -0.59
HNRNPU-222ENST00000639880 CANXP27824 592 aaKnown RBP11.33□□□□□ -0.6
HNRNPU-222ENST00000639880 NBR1Q14596 966 aa11.32□□□□□ -0.6
HNRNPU-222ENST00000639880 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
HNRNPU-222ENST00000639880 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
HNRNPU-222ENST00000639880 EIF4G1Q04637 1599 aaKnown RBP11.31□□□□□ -0.6
HNRNPU-222ENST00000639880 CHGAP10645 457 aaKnown RBP11.3□□□□□ -0.6
HNRNPU-222ENST00000639880 HSPA5P11021 654 aaKnown RBP11.3□□□□□ -0.6
HNRNPU-222ENST00000639880 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
HNRNPU-222ENST00000639880 CCER2I3L3R5 266 aa11.3□□□□□ -0.6
HNRNPU-222ENST00000639880 CADPSQ9ULU8 1353 aa11.29□□□□□ -0.6
HNRNPU-222ENST00000639880 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
HNRNPU-222ENST00000639880 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
HNRNPU-222ENST00000639880 KIF21BO75037 1637 aa11.28□□□□□ -0.6
HNRNPU-222ENST00000639880 B4GALNT3Q6L9W6 998 aa11.27□□□□□ -0.6
HNRNPU-222ENST00000639880 SYNJ1O43426 1573 aa11.27□□□□□ -0.61
HNRNPU-222ENST00000639880 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
HNRNPU-222ENST00000639880 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-222ENST00000639880 MPHOSPH9Q99550 1183 aa11.24□□□□□ -0.61
HNRNPU-222ENST00000639880 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
HNRNPU-222ENST00000639880 IGF1RP08069 1367 aa11.24□□□□□ -0.61
HNRNPU-222ENST00000639880 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
HNRNPU-222ENST00000639880 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
HNRNPU-222ENST00000639880 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■□□□ 13.5
HNRNPU-222ENST00000639880 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
HNRNPU-222ENST00000639880 ARAP1Q96P48 1450 aa11.21□□□□□ -0.61
HNRNPU-222ENST00000639880 DCAF11Q8TEB1 546 aa11.2□□□□□ -0.62
HNRNPU-222ENST00000639880 SENP3Q9H4L4 574 aaPredicted RBP11.2□□□□□ -0.62
HNRNPU-222ENST00000639880 PKD2Q13563 968 aa11.19□□□□□ -0.62
HNRNPU-222ENST00000639880 PHLDB1Q86UU1 1377 aa11.19□□□□□ -0.62
HNRNPU-222ENST00000639880 CC2D1BQ5T0F9 858 aaKnown RBP11.16□□□□□ -0.62
HNRNPU-222ENST00000639880 FGD5Q6ZNL6 1462 aa11.16□□□□□ -0.62
HNRNPU-222ENST00000639880 FANCD2Q9BXW9 1451 aa11.15□□□□□ -0.62
HNRNPU-222ENST00000639880 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
HNRNPU-222ENST00000639880 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
HNRNPU-222ENST00000639880 NEFMP07197 916 aa11.14□□□□□ -0.63
HNRNPU-222ENST00000639880 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
HNRNPU-222ENST00000639880 KNSTRNQ9Y448 316 aa11.13□□□□□ -0.63
HNRNPU-222ENST00000639880 PRXQ9BXM0 1461 aa11.12□□□□□ -0.63
HNRNPU-222ENST00000639880 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
HNRNPU-222ENST00000639880 CCDC18Q5T9S5 1454 aa11.12□□□□□ -0.63
HNRNPU-222ENST00000639880 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
HNRNPU-222ENST00000639880 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
HNRNPU-222ENST00000639880 ERCC6Q03468 1493 aa11.1□□□□□ -0.63
HNRNPU-222ENST00000639880 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
HNRNPU-222ENST00000639880 NUP155O75694 1391 aa11.1□□□□□ -0.63
HNRNPU-222ENST00000639880 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
HNRNPU-222ENST00000639880 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
HNRNPU-222ENST00000639880 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
HNRNPU-222ENST00000639880 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
HNRNPU-222ENST00000639880 TOP2BQ02880 1626 aa11.08□□□□□ -0.64
HNRNPU-222ENST00000639880 FGD6Q6ZV73 1430 aa11.07□□□□□ -0.64
HNRNPU-222ENST00000639880 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
HNRNPU-222ENST00000639880 UPF2Q9HAU5 1272 aaKnown RBP11.07□□□□□ -0.64
HNRNPU-222ENST00000639880 NOP58Q9Y2X3 529 aaKnown RBP11.07□□□□□ -0.64
HNRNPU-222ENST00000639880 CUX1P39880 1505 aa11.06□□□□□ -0.64
HNRNPU-222ENST00000639880 CFTRP13569 1480 aa11.06□□□□□ -0.64
HNRNPU-222ENST00000639880 TNNT2P45379 298 aaPredicted RBP11.05□□□□□ -0.64
HNRNPU-222ENST00000639880 HNRNPMP52272 730 aaKnown RBP eCLIP11.05□□□□□ -0.64
HNRNPU-222ENST00000639880 LAS1LQ9Y4W2 734 aaKnown RBP11.05□□□□□ -0.64
HNRNPU-222ENST00000639880 ZNF644Q9H582 1327 aaPredicted RBP11.05□□□□□ -0.64
HNRNPU-222ENST00000639880 ARXQ96QS3 562 aa11.05□□□□□ -0.64
HNRNPU-222ENST00000639880 RGS3P49796 1198 aa11.04□□□□□ -0.64
HNRNPU-222ENST00000639880 TMF1P82094 1093 aa11.04□□□□□ -0.64
HNRNPU-222ENST00000639880 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
HNRNPU-222ENST00000639880 CDCA8Q53HL2 280 aa11.03□□□□□ -0.64
HNRNPU-222ENST00000639880 ST20-MTHFSA0A0A6YYL1 179 aa11.02□□□□□ -0.65
HNRNPU-222ENST00000639880 ROCK2O75116 1388 aaKnown RBP11.02□□□□□ -0.65
HNRNPU-222ENST00000639880 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.65
HNRNPU-222ENST00000639880 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.65
HNRNPU-222ENST00000639880 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
HNRNPU-222ENST00000639880 GAPVD1Q14C86 1478 aa11.01□□□□□ -0.65
HNRNPU-222ENST00000639880 NUDCQ9Y266 331 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms