RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 CYB5RLQ6IPT4 315 aa9.24□□□□□ -0.93
HNRNPU-220ENST00000639667 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
HNRNPU-220ENST00000639667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.24□□□□□ -0.93
HNRNPU-220ENST00000639667 HNRNPUL2Q1KMD3 747 aaKnown RBP9.24□□□□□ -0.93
HNRNPU-220ENST00000639667 PRXQ9BXM0 1461 aa9.23□□□□□ -0.93
HNRNPU-220ENST00000639667 CUL7Q14999 1698 aa9.23□□□□□ -0.93
HNRNPU-220ENST00000639667 CHD1O14646 1710 aa9.21□□□□□ -0.93
HNRNPU-220ENST00000639667 DNAJC5Q9H3Z4 198 aa9.21□□□□□ -0.94
HNRNPU-220ENST00000639667 PRG4Q92954 1404 aaPredicted RBP9.2□□□□□ -0.94
HNRNPU-220ENST00000639667 CARMIL2Q6F5E8 1435 aa9.19□□□□□ -0.94
HNRNPU-220ENST00000639667 KIAA0586Q9BVV6 1533 aa9.19□□□□□ -0.94
HNRNPU-220ENST00000639667 NPM1P06748 294 aaKnown RBP eCLIP9.18□□□□□ -0.94
HNRNPU-220ENST00000639667 NUP160Q12769 1436 aa9.18□□□□□ -0.94
HNRNPU-220ENST00000639667 APLP2Q06481 763 aa9.17□□□□□ -0.94
HNRNPU-220ENST00000639667 CEP170Q5SW79 1584 aa9.17□□□□□ -0.94
HNRNPU-220ENST00000639667 TNIKQ9UKE5 1360 aa9.16□□□□□ -0.94
HNRNPU-220ENST00000639667 CLIP1P30622 1438 aa9.15□□□□□ -0.94
HNRNPU-220ENST00000639667 KIF21BO75037 1637 aa9.15□□□□□ -0.95
HNRNPU-220ENST00000639667 PTPRGP23470 1445 aa9.14□□□□□ -0.95
HNRNPU-220ENST00000639667 IQGAP2Q13576 1575 aa9.14□□□□□ -0.95
HNRNPU-220ENST00000639667 FHOD3Q2V2M9 1422 aa9.13□□□□□ -0.95
HNRNPU-220ENST00000639667 CEP162Q5TB80 1403 aa9.12□□□□□ -0.95
HNRNPU-220ENST00000639667 TRHP20396 242 aaPredicted RBP9.1□□□□□ -0.95
HNRNPU-220ENST00000639667 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
HNRNPU-220ENST00000639667 ARHGEF11O15085 1522 aa9.09□□□□□ -0.95
HNRNPU-220ENST00000639667 KCNH8Q96L42 1107 aa9.08□□□□□ -0.96
HNRNPU-220ENST00000639667 CLASP1Q7Z460 1538 aa9.08□□□□□ -0.96
HNRNPU-220ENST00000639667 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
HNRNPU-220ENST00000639667 CTTNBP2Q8WZ74 1663 aa9.05□□□□□ -0.96
HNRNPU-220ENST00000639667 UGGT2Q9NYU1 1516 aa9.04□□□□□ -0.96
HNRNPU-220ENST00000639667 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
HNRNPU-220ENST00000639667 CDK11AQ9UQ88 783 aaPredicted RBP9.04□□□□□ -0.96
HNRNPU-220ENST00000639667 DISP1Q96F81 1524 aa9.04□□□□□ -0.96
HNRNPU-220ENST00000639667 PLEKHD1A6NEE1 506 aa9.03□□□□□ -0.96
HNRNPU-220ENST00000639667 RIMBP3CA6NJZ7 1639 aa9.03□□□□□ -0.96
HNRNPU-220ENST00000639667 RIMBP3BA6NNM3 1639 aa9.03□□□□□ -0.96
HNRNPU-220ENST00000639667 RIMBP3Q9UFD9 1639 aa9.03□□□□□ -0.96
HNRNPU-220ENST00000639667 ARAP1Q96P48 1450 aa9.02□□□□□ -0.96
HNRNPU-220ENST00000639667 FMN1Q68DA7 1419 aa9.02□□□□□ -0.96
HNRNPU-220ENST00000639667 UACAQ9BZF9 1416 aa9.02□□□□□ -0.97
HNRNPU-220ENST00000639667 PLB1Q6P1J6 1458 aa9.02□□□□□ -0.97
HNRNPU-220ENST00000639667 KIAA0556O60303 1618 aa9.01□□□□□ -0.97
HNRNPU-220ENST00000639667 EFCAB5A4FU69 1503 aa9□□□□□ -0.97
HNRNPU-220ENST00000639667 FAM69CQ0P6D2 419 aa8.98□□□□□ -0.97
HNRNPU-220ENST00000639667 SHROOM2Q13796 1616 aa8.97□□□□□ -0.97
HNRNPU-220ENST00000639667 MTUS2Q5JR59 1369 aa8.97□□□□□ -0.97
HNRNPU-220ENST00000639667 ZNF777Q9ULD5 760 aaPredicted RBP8.96□□□□□ -0.98
HNRNPU-220ENST00000639667 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.98
HNRNPU-220ENST00000639667 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.98
HNRNPU-220ENST00000639667 SAMD9Q5K651 1589 aa8.94□□□□□ -0.98
HNRNPU-220ENST00000639667 CASKIN1Q8WXD9 1431 aa8.93□□□□□ -0.98
HNRNPU-220ENST00000639667 CDK13Q14004 1512 aaKnown RBP8.92□□□□□ -0.98
HNRNPU-220ENST00000639667 ABCC2Q92887 1545 aa8.92□□□□□ -0.98
HNRNPU-220ENST00000639667 KANK4Q5T7N3 995 aaPredicted RBP8.92□□□□□ -0.98
HNRNPU-220ENST00000639667 RAPGEF6Q8TEU7 1601 aa8.91□□□□□ -0.98
HNRNPU-220ENST00000639667 ATP10BO94823 1461 aa8.91□□□□□ -0.98
HNRNPU-220ENST00000639667 ASXL2Q76L83 1435 aa8.91□□□□□ -0.98
HNRNPU-220ENST00000639667 NUP153P49790 1475 aaKnown RBP8.9□□□□□ -0.98
HNRNPU-220ENST00000639667 ITGAEP38570 1179 aa8.9□□□□□ -0.99
HNRNPU-220ENST00000639667 PCF11O94913 1555 aaKnown RBP8.9□□□□□ -0.99
HNRNPU-220ENST00000639667 EPRSP07814 1512 aaKnown RBP8.89□□□□□ -0.99
HNRNPU-220ENST00000639667 FAM50AQ14320 339 aaKnown RBP8.89□□□□□ -0.99
HNRNPU-220ENST00000639667 HECW1Q76N89 1606 aa8.89□□□□□ -0.99
HNRNPU-220ENST00000639667 FYCO1Q9BQS8 1478 aa8.89□□□□□ -0.99
HNRNPU-220ENST00000639667 ABCA8O94911 1581 aa8.88□□□□□ -0.99
HNRNPU-220ENST00000639667 UHRF1BP1LA0JNW5 1464 aa8.88□□□□□ -0.99
HNRNPU-220ENST00000639667 ADCY10Q96PN6 1610 aa8.87□□□□□ -0.99
HNRNPU-220ENST00000639667 CFDP1Q9UEE9 299 aaPredicted RBP8.87□□□□□ -0.99
HNRNPU-220ENST00000639667 CCDC18Q5T9S5 1454 aa8.87□□□□□ -0.99
HNRNPU-220ENST00000639667 CCNB3Q8WWL7 1395 aa8.86□□□□□ -0.99
HNRNPU-220ENST00000639667 KDM5BQ9UGL1 1544 aa8.85□□□□□ -0.99
HNRNPU-220ENST00000639667 WDR7Q9Y4E6 1490 aa8.85□□□□□ -0.99
HNRNPU-220ENST00000639667 EFCAB2Q5VUJ9 269 aa8.85□□□□□ -0.99
HNRNPU-220ENST00000639667 TROQ12816 1431 aaPredicted RBP8.84□□□□□ -0.99
HNRNPU-220ENST00000639667 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
HNRNPU-220ENST00000639667 CD109Q6YHK3 1445 aa8.83□□□□□ -1
HNRNPU-220ENST00000639667 LRRC9Q6ZRR7 1453 aa8.8□□□□□ -1
HNRNPU-220ENST00000639667 HNRNPMP52272 730 aaKnown RBP eCLIP8.8□□□□□ -1
HNRNPU-220ENST00000639667 TIAM1Q13009 1591 aa8.79□□□□□ -1
HNRNPU-220ENST00000639667 CHIC2Q9UKJ5 165 aa8.79□□□□□ -1
HNRNPU-220ENST00000639667 ABCC10Q5T3U5 1492 aa8.79□□□□□ -1
HNRNPU-220ENST00000639667 ZNF644Q9H582 1327 aaPredicted RBP8.79□□□□□ -1
HNRNPU-220ENST00000639667 NCOA2Q15596 1464 aa8.78□□□□□ -1
HNRNPU-220ENST00000639667 RAPGEF3O95398 923 aa8.77□□□□□ -1
HNRNPU-220ENST00000639667 TSPY4P0CV99 314 aa8.77□□□□□ -1
HNRNPU-220ENST00000639667 TSPY10P0CW01 314 aa8.77□□□□□ -1
HNRNPU-220ENST00000639667 ARHGAP5Q13017 1502 aa8.77□□□□□ -1.01
HNRNPU-220ENST00000639667 EHBP1L1Q8N3D4 1523 aa8.77□□□□□ -1.01
HNRNPU-220ENST00000639667 MAPKBP1O60336 1514 aa8.77□□□□□ -1.01
HNRNPU-220ENST00000639667 KIF14Q15058 1648 aa8.77□□□□□ -1.01
HNRNPU-220ENST00000639667 ARID4BQ4LE39 1312 aaPredicted RBP8.76□□□□□ -1.01
HNRNPU-220ENST00000639667 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
HNRNPU-220ENST00000639667 PHLDB1Q86UU1 1377 aa8.75□□□□□ -1.01
HNRNPU-220ENST00000639667 TSPOAP1O95153 1857 aa8.75□□□□□ -1.01
HNRNPU-220ENST00000639667 AFAP1Q8N556 730 aa8.75□□□□□ -1.01
HNRNPU-220ENST00000639667 PLPPR3Q6T4P5 718 aa8.74□□□□□ -1.01
HNRNPU-220ENST00000639667 SCAPERQ9BY12 1400 aa8.74□□□□□ -1.01
HNRNPU-220ENST00000639667 FANCAO15360 1455 aa8.73□□□□□ -1.01
HNRNPU-220ENST00000639667 PLCH2O75038 1416 aa8.73□□□□□ -1.01
HNRNPU-220ENST00000639667 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms