RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.26
PAX6-257ENST00000639409 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
PAX6-257ENST00000639409 CTTNBP2Q8WZ74 1663 aa16.64■□□□□ 0.25
PAX6-257ENST00000639409 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
PAX6-257ENST00000639409 PCF11O94913 1555 aaKnown RBP16.58■□□□□ 0.24
PAX6-257ENST00000639409 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
PAX6-257ENST00000639409 MRC2Q9UBG0 1479 aa16.57■□□□□ 0.24
PAX6-257ENST00000639409 TIAM1Q13009 1591 aa16.57■□□□□ 0.24
PAX6-257ENST00000639409 FHOD3Q2V2M9 1422 aa16.57■□□□□ 0.24
PAX6-257ENST00000639409 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
PAX6-257ENST00000639409 EFCAB5A4FU69 1503 aa16.53■□□□□ 0.24
PAX6-257ENST00000639409 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.24
PAX6-257ENST00000639409 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
PAX6-257ENST00000639409 CFAP43Q8NDM7 1665 aa16.51■□□□□ 0.23
PAX6-257ENST00000639409 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
PAX6-257ENST00000639409 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.23
PAX6-257ENST00000639409 WDR62O43379 1518 aa16.49■□□□□ 0.23
PAX6-257ENST00000639409 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
PAX6-257ENST00000639409 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
PAX6-257ENST00000639409 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
PAX6-257ENST00000639409 ADAMTS12P58397 1594 aa16.46■□□□□ 0.22
PAX6-257ENST00000639409 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
PAX6-257ENST00000639409 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
PAX6-257ENST00000639409 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
PAX6-257ENST00000639409 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
PAX6-257ENST00000639409 SNAPC4Q5SXM2 1469 aa16.43■□□□□ 0.22
PAX6-257ENST00000639409 LRRIQ1Q96JM4 1722 aa16.41■□□□□ 0.22
PAX6-257ENST00000639409 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
PAX6-257ENST00000639409 PHLDB1Q86UU1 1377 aa16.41■□□□□ 0.22
PAX6-257ENST00000639409 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
PAX6-257ENST00000639409 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
PAX6-257ENST00000639409 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
PAX6-257ENST00000639409 FMN1Q68DA7 1419 aa16.39■□□□□ 0.21
PAX6-257ENST00000639409 BCL11AQ9H165 835 aa16.37■□□□□ 0.21
PAX6-257ENST00000639409 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
PAX6-257ENST00000639409 ITGAEP38570 1179 aa16.36■□□□□ 0.21
PAX6-257ENST00000639409 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
PAX6-257ENST00000639409 IQGAP2Q13576 1575 aa16.35■□□□□ 0.21
PAX6-257ENST00000639409 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
PAX6-257ENST00000639409 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
PAX6-257ENST00000639409 FAM50AQ14320 339 aaKnown RBP16.26■□□□□ 0.19
PAX6-257ENST00000639409 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
PAX6-257ENST00000639409 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
PAX6-257ENST00000639409 MTUS2Q5JR59 1369 aa16.24■□□□□ 0.19
PAX6-257ENST00000639409 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
PAX6-257ENST00000639409 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
PAX6-257ENST00000639409 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
PAX6-257ENST00000639409 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.18
PAX6-257ENST00000639409 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
PAX6-257ENST00000639409 KIAA0556O60303 1618 aa16.2■□□□□ 0.18
PAX6-257ENST00000639409 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
PAX6-257ENST00000639409 EHBP1L1Q8N3D4 1523 aa16.2■□□□□ 0.18
PAX6-257ENST00000639409 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
PAX6-257ENST00000639409 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
PAX6-257ENST00000639409 SUPT6HQ7KZ85 1726 aaKnown RBP16.19■□□□□ 0.18
PAX6-257ENST00000639409 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
PAX6-257ENST00000639409 CEP170Q5SW79 1584 aa16.18■□□□□ 0.18
PAX6-257ENST00000639409 CDK13Q14004 1512 aaKnown RBP16.18■□□□□ 0.18
PAX6-257ENST00000639409 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
PAX6-257ENST00000639409 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
PAX6-257ENST00000639409 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
PAX6-257ENST00000639409 EPRSP07814 1512 aaKnown RBP16.17■□□□□ 0.18
PAX6-257ENST00000639409 MAPKBP1O60336 1514 aa16.17■□□□□ 0.18
PAX6-257ENST00000639409 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
PAX6-257ENST00000639409 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
PAX6-257ENST00000639409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.18
PAX6-257ENST00000639409 ARHGEF11O15085 1522 aa16.15■□□□□ 0.18
PAX6-257ENST00000639409 ARID3CA6NKF2 412 aa16.14■□□□□ 0.18
PAX6-257ENST00000639409 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
PAX6-257ENST00000639409 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
PAX6-257ENST00000639409 PTPRKQ15262 1439 aa16.12■□□□□ 0.17
PAX6-257ENST00000639409 FBLN2P98095 1184 aa16.11■□□□□ 0.17
PAX6-257ENST00000639409 PTPN23Q9H3S7 1636 aa16.1■□□□□ 0.17
PAX6-257ENST00000639409 NUP153P49790 1475 aaKnown RBP16.08■□□□□ 0.17
PAX6-257ENST00000639409 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.17
PAX6-257ENST00000639409 NUP160Q12769 1436 aa16.07■□□□□ 0.16
PAX6-257ENST00000639409 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
PAX6-257ENST00000639409 PLB1Q6P1J6 1458 aa16.03■□□□□ 0.16
PAX6-257ENST00000639409 TCOF1Q13428 1488 aaKnown RBP16.02■□□□□ 0.16
PAX6-257ENST00000639409 NAIPQ13075 1403 aa16■□□□□ 0.15
PAX6-257ENST00000639409 ARXQ96QS3 562 aa15.99■□□□□ 0.15
PAX6-257ENST00000639409 JPH4Q96JJ6 628 aa15.99■□□□□ 0.15
PAX6-257ENST00000639409 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
PAX6-257ENST00000639409 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
PAX6-257ENST00000639409 CHD1O14646 1710 aa15.95■□□□□ 0.14
PAX6-257ENST00000639409 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
PAX6-257ENST00000639409 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
PAX6-257ENST00000639409 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
PAX6-257ENST00000639409 CHIC2Q9UKJ5 165 aa15.94■□□□□ 0.14
PAX6-257ENST00000639409 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
PAX6-257ENST00000639409 KDM6BO15054 1643 aa15.93■□□□□ 0.14
PAX6-257ENST00000639409 UACAQ9BZF9 1416 aa15.93■□□□□ 0.14
PAX6-257ENST00000639409 KIF14Q15058 1648 aa15.93■□□□□ 0.14
PAX6-257ENST00000639409 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
PAX6-257ENST00000639409 ABCA8O94911 1581 aa15.91■□□□□ 0.14
PAX6-257ENST00000639409 MIER1Q8N108 512 aa15.9■□□□□ 0.14
PAX6-257ENST00000639409 TROQ12816 1431 aaPredicted RBP15.9■□□□□ 0.14
PAX6-257ENST00000639409 ZNF644Q9H582 1327 aaPredicted RBP15.9■□□□□ 0.14
PAX6-257ENST00000639409 ADCY10Q96PN6 1610 aa15.88■□□□□ 0.13
PAX6-257ENST00000639409 DNMT1P26358 1616 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms