RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-256ENST00000639394 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.03
PAX6-256ENST00000639394 VSIG10Q8N0Z9 540 aa15.25■□□□□ 0.03
PAX6-256ENST00000639394 A0A0U1RQG5 324 aaPredicted RBP15.25■□□□□ 0.03
PAX6-256ENST00000639394 RSPH4AQ5TD94 716 aa15.24■□□□□ 0.03
PAX6-256ENST00000639394 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
PAX6-256ENST00000639394 ABCC8Q09428 1581 aa15.21■□□□□ 0.03
PAX6-256ENST00000639394 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.03
PAX6-256ENST00000639394 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
PAX6-256ENST00000639394 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
PAX6-256ENST00000639394 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
PAX6-256ENST00000639394 NPM2Q86SE8 214 aaKnown RBP15.18■□□□□ 0.02
PAX6-256ENST00000639394 NESP48681 1621 aa15.18■□□□□ 0.02
PAX6-256ENST00000639394 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
PAX6-256ENST00000639394 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
PAX6-256ENST00000639394 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
PAX6-256ENST00000639394 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
PAX6-256ENST00000639394 CHMP4AQ9BY43 222 aa15.1■□□□□ 0.01
PAX6-256ENST00000639394 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
PAX6-256ENST00000639394 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
PAX6-256ENST00000639394 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
PAX6-256ENST00000639394 NAP1L5Q96NT1 182 aaPredicted RBP15.06■□□□□ 0
PAX6-256ENST00000639394 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ 0
PAX6-256ENST00000639394 FBXO3Q9UK99 471 aa15.05■□□□□ 0
PAX6-256ENST00000639394 TOP2BQ02880 1626 aa15.05■□□□□ 0
PAX6-256ENST00000639394 AEBP2Q6ZN18 517 aaPredicted RBP15.05■□□□□ -0
PAX6-256ENST00000639394 CUX1P39880 1505 aa15.05■□□□□ -0
PAX6-256ENST00000639394 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
PAX6-256ENST00000639394 MIER1Q8N108 512 aa15.04■□□□□ -0
PAX6-256ENST00000639394 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
PAX6-256ENST00000639394 RRP9O43818 475 aaKnown RBP15.02□□□□□ -0.01
PAX6-256ENST00000639394 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
PAX6-256ENST00000639394 BCCIPQ9P287 314 aaKnown RBP eCLIP14.99□□□□□ -0.01
PAX6-256ENST00000639394 C14orf37Q86TY3 774 aa14.96□□□□□ -0.01
PAX6-256ENST00000639394 DNMBPQ6XZF7 1577 aa14.96□□□□□ -0.02
PAX6-256ENST00000639394 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
PAX6-256ENST00000639394 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
PAX6-256ENST00000639394 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
PAX6-256ENST00000639394 HSP90B1P14625 803 aaKnown RBP14.94□□□□□ -0.02
PAX6-256ENST00000639394 TOPBP1Q92547 1522 aa14.93□□□□□ -0.02
PAX6-256ENST00000639394 PAXIP1Q6ZW49 1069 aaPredicted RBP14.93□□□□□ -0.02
PAX6-256ENST00000639394 NAP1L2Q9ULW6 460 aaPredicted RBP14.93□□□□□ -0.02
PAX6-256ENST00000639394 DHX37Q8IY37 1157 aaKnown RBP14.93□□□□□ -0.02
PAX6-256ENST00000639394 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
PAX6-256ENST00000639394 IPO4Q8TEX9 1081 aaKnown RBP14.92□□□□□ -0.02
PAX6-256ENST00000639394 NOP58Q9Y2X3 529 aaKnown RBP14.91□□□□□ -0.02
PAX6-256ENST00000639394 SOGA1O94964 1423 aa14.9□□□□□ -0.02
PAX6-256ENST00000639394 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
PAX6-256ENST00000639394 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
PAX6-256ENST00000639394 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
PAX6-256ENST00000639394 HSP90AA2PQ14568 343 aaPredicted RBP14.88□□□□□ -0.03
PAX6-256ENST00000639394 FAM43AQ8N2R8 423 aa14.88□□□□□ -0.03
PAX6-256ENST00000639394 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
PAX6-256ENST00000639394 WASHC2AQ641Q2 1341 aa14.87□□□□□ -0.03
PAX6-256ENST00000639394 EEA1Q15075 1411 aa14.86□□□□□ -0.03
PAX6-256ENST00000639394 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
PAX6-256ENST00000639394 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
PAX6-256ENST00000639394 POLA1P09884 1462 aaPredicted RBP14.85□□□□□ -0.03
PAX6-256ENST00000639394 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
PAX6-256ENST00000639394 WDR62O43379 1518 aa14.83□□□□□ -0.04
PAX6-256ENST00000639394 NCLP19338 710 aaKnown RBP14.83□□□□□ -0.04
PAX6-256ENST00000639394 CALD1Q05682 793 aaKnown RBP14.83□□□□□ -0.04
PAX6-256ENST00000639394 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
PAX6-256ENST00000639394 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
PAX6-256ENST00000639394 CENPJQ9HC77 1338 aaPredicted RBP14.8□□□□□ -0.04
PAX6-256ENST00000639394 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
PAX6-256ENST00000639394 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
PAX6-256ENST00000639394 NBR1Q14596 966 aa14.78□□□□□ -0.04
PAX6-256ENST00000639394 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
PAX6-256ENST00000639394 FKBP8Q14318 412 aa14.78□□□□□ -0.04
PAX6-256ENST00000639394 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
PAX6-256ENST00000639394 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
PAX6-256ENST00000639394 BBXQ8WY36 941 aaPredicted RBP14.77□□□□□ -0.04
PAX6-256ENST00000639394 CUX2O14529 1486 aa14.77□□□□□ -0.05
PAX6-256ENST00000639394 CANXP27824 592 aaKnown RBP14.75□□□□□ -0.05
PAX6-256ENST00000639394 CHRM1P11229 460 aaPredicted RBP14.74□□□□□ -0.05
PAX6-256ENST00000639394 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
PAX6-256ENST00000639394 CNGB1Q14028 1251 aaPredicted RBP14.74□□□□□ -0.05
PAX6-256ENST00000639394 TARBP1Q13395 1621 aaKnown RBP14.73□□□□□ -0.05
PAX6-256ENST00000639394 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
PAX6-256ENST00000639394 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
PAX6-256ENST00000639394 PRDM4Q9UKN5 801 aa14.71□□□□□ -0.05
PAX6-256ENST00000639394 ARID4BQ4LE39 1312 aaPredicted RBP14.7□□□□□ -0.06
PAX6-256ENST00000639394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
PAX6-256ENST00000639394 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
PAX6-256ENST00000639394 PPM1GO15355 546 aaPredicted RBP14.68□□□□□ -0.06
PAX6-256ENST00000639394 BCANQ96GW7 911 aa14.68□□□□□ -0.06
PAX6-256ENST00000639394 KIF21BO75037 1637 aa14.68□□□□□ -0.06
PAX6-256ENST00000639394 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
PAX6-256ENST00000639394 ABCA5Q8WWZ7 1642 aa14.67□□□□□ -0.06
PAX6-256ENST00000639394 IGF1RP08069 1367 aa14.67□□□□□ -0.06
PAX6-256ENST00000639394 PRXQ9BXM0 1461 aa14.66□□□□□ -0.06
PAX6-256ENST00000639394 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
PAX6-256ENST00000639394 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
PAX6-256ENST00000639394 ZFP91Q96JP5 570 aaPredicted RBP14.64□□□□□ -0.07
PAX6-256ENST00000639394 GOLGA3Q08378 1498 aa14.64□□□□□ -0.07
PAX6-256ENST00000639394 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
PAX6-256ENST00000639394 VGFO15240 615 aaPredicted RBP14.62□□□□□ -0.07
PAX6-256ENST00000639394 NEFMP07197 916 aa14.62□□□□□ -0.07
PAX6-256ENST00000639394 STAC3Q96MF2 364 aa14.62□□□□□ -0.07
PAX6-256ENST00000639394 RAPGEF2Q9Y4G8 1499 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms