RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 FHOD3Q2V2M9 1422 aa13.52□□□□□ -0.25
NECAP1-217ENST00000639276 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.25
NECAP1-217ENST00000639276 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
NECAP1-217ENST00000639276 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.26
NECAP1-217ENST00000639276 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
NECAP1-217ENST00000639276 TIAM1Q13009 1591 aa13.44□□□□□ -0.26
NECAP1-217ENST00000639276 ITGAEP38570 1179 aa13.44□□□□□ -0.26
NECAP1-217ENST00000639276 FHAD1B1AJZ9 1412 aa13.43□□□□□ -0.26
NECAP1-217ENST00000639276 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
NECAP1-217ENST00000639276 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
NECAP1-217ENST00000639276 RRBP1Q9P2E9 1410 aaKnown RBP13.42□□□□□ -0.26
NECAP1-217ENST00000639276 LRRC9Q6ZRR7 1453 aa13.41□□□□□ -0.26
NECAP1-217ENST00000639276 WDR62O43379 1518 aa13.41□□□□□ -0.26
NECAP1-217ENST00000639276 EFCAB5A4FU69 1503 aa13.41□□□□□ -0.26
NECAP1-217ENST00000639276 CCNB3Q8WWL7 1395 aa13.4□□□□□ -0.26
NECAP1-217ENST00000639276 PHLDB1Q86UU1 1377 aa13.39□□□□□ -0.27
NECAP1-217ENST00000639276 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
NECAP1-217ENST00000639276 MAP3K1Q13233 1512 aa13.38□□□□□ -0.27
NECAP1-217ENST00000639276 GRIN2BQ13224 1484 aa13.37□□□□□ -0.27
NECAP1-217ENST00000639276 CASKIN1Q8WXD9 1431 aa13.37□□□□□ -0.27
NECAP1-217ENST00000639276 ADAMTS12P58397 1594 aa13.36□□□□□ -0.27
NECAP1-217ENST00000639276 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
NECAP1-217ENST00000639276 SAMD9Q5K651 1589 aa13.35□□□□□ -0.27
NECAP1-217ENST00000639276 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
NECAP1-217ENST00000639276 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
NECAP1-217ENST00000639276 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
NECAP1-217ENST00000639276 FAM50AQ14320 339 aaKnown RBP13.33□□□□□ -0.28
NECAP1-217ENST00000639276 THOC2Q8NI27 1593 aaKnown RBP13.33□□□□□ -0.28
NECAP1-217ENST00000639276 EIF4G3O43432 1585 aaKnown RBP13.31□□□□□ -0.28
NECAP1-217ENST00000639276 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
NECAP1-217ENST00000639276 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
NECAP1-217ENST00000639276 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
NECAP1-217ENST00000639276 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
NECAP1-217ENST00000639276 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
NECAP1-217ENST00000639276 FBLN2P98095 1184 aa13.29□□□□□ -0.28
NECAP1-217ENST00000639276 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
NECAP1-217ENST00000639276 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
NECAP1-217ENST00000639276 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
NECAP1-217ENST00000639276 RAB3GAP2Q9H2M9 1393 aa13.24□□□□□ -0.29
NECAP1-217ENST00000639276 MAGI3Q5TCQ9 1506 aa13.21□□□□□ -0.29
NECAP1-217ENST00000639276 KIAA0586Q9BVV6 1533 aa13.21□□□□□ -0.29
NECAP1-217ENST00000639276 UGGT2Q9NYU1 1516 aa13.2□□□□□ -0.3
NECAP1-217ENST00000639276 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
NECAP1-217ENST00000639276 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
NECAP1-217ENST00000639276 FGD6Q6ZV73 1430 aa13.19□□□□□ -0.3
NECAP1-217ENST00000639276 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
NECAP1-217ENST00000639276 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
NECAP1-217ENST00000639276 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
NECAP1-217ENST00000639276 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
NECAP1-217ENST00000639276 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
NECAP1-217ENST00000639276 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
NECAP1-217ENST00000639276 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
NECAP1-217ENST00000639276 EPRSP07814 1512 aaKnown RBP13.17□□□□□ -0.3
NECAP1-217ENST00000639276 KIAA0556O60303 1618 aa13.16□□□□□ -0.3
NECAP1-217ENST00000639276 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
NECAP1-217ENST00000639276 PTPRKQ15262 1439 aa13.15□□□□□ -0.3
NECAP1-217ENST00000639276 HECW1Q76N89 1606 aa13.15□□□□□ -0.3
NECAP1-217ENST00000639276 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
NECAP1-217ENST00000639276 CCDC18Q5T9S5 1454 aa13.14□□□□□ -0.31
NECAP1-217ENST00000639276 EHBP1L1Q8N3D4 1523 aa13.14□□□□□ -0.31
NECAP1-217ENST00000639276 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
NECAP1-217ENST00000639276 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
NECAP1-217ENST00000639276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
NECAP1-217ENST00000639276 MAPKBP1O60336 1514 aa13.12□□□□□ -0.31
NECAP1-217ENST00000639276 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
NECAP1-217ENST00000639276 ARHGEF11O15085 1522 aa13.1□□□□□ -0.31
NECAP1-217ENST00000639276 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
NECAP1-217ENST00000639276 NUP160Q12769 1436 aa13.1□□□□□ -0.31
NECAP1-217ENST00000639276 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
NECAP1-217ENST00000639276 PLB1Q6P1J6 1458 aa13.09□□□□□ -0.31
NECAP1-217ENST00000639276 NEUROD1Q13562 356 aa13.08□□□□□ -0.32
NECAP1-217ENST00000639276 PTPN23Q9H3S7 1636 aa13.08□□□□□ -0.32
NECAP1-217ENST00000639276 RAPGEF6Q8TEU7 1601 aa13.07□□□□□ -0.32
NECAP1-217ENST00000639276 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
NECAP1-217ENST00000639276 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
NECAP1-217ENST00000639276 PRG4Q92954 1404 aaPredicted RBP13.04□□□□□ -0.32
NECAP1-217ENST00000639276 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
NECAP1-217ENST00000639276 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
NECAP1-217ENST00000639276 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
NECAP1-217ENST00000639276 NAIPQ13075 1403 aa13.03□□□□□ -0.32
NECAP1-217ENST00000639276 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
NECAP1-217ENST00000639276 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
NECAP1-217ENST00000639276 MIER1Q8N108 512 aa12.99□□□□□ -0.33
NECAP1-217ENST00000639276 MIA2Q96PC5 1412 aa12.98□□□□□ -0.33
NECAP1-217ENST00000639276 CHD1O14646 1710 aa12.98□□□□□ -0.33
NECAP1-217ENST00000639276 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.33
NECAP1-217ENST00000639276 KDM6BO15054 1643 aa12.96□□□□□ -0.33
NECAP1-217ENST00000639276 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
NECAP1-217ENST00000639276 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
NECAP1-217ENST00000639276 KIF14Q15058 1648 aa12.95□□□□□ -0.34
NECAP1-217ENST00000639276 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
NECAP1-217ENST00000639276 ATP10BO94823 1461 aa12.94□□□□□ -0.34
NECAP1-217ENST00000639276 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
NECAP1-217ENST00000639276 ABCA8O94911 1581 aa12.94□□□□□ -0.34
NECAP1-217ENST00000639276 PTPRGP23470 1445 aa12.93□□□□□ -0.34
NECAP1-217ENST00000639276 ABCC5O15440 1437 aa12.93□□□□□ -0.34
NECAP1-217ENST00000639276 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
NECAP1-217ENST00000639276 DAPK1P53355 1430 aa12.92□□□□□ -0.34
NECAP1-217ENST00000639276 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
NECAP1-217ENST00000639276 FOXD1Q16676 465 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms