RNA–Protein interactions for RNA: ENST00000639169.1

GCSH-208, Transcript of glycine cleavage system protein H, humanhuman

TSL 2 BASIC

Gene GCSH, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-208ENST00000639169 AQRO60306 1485 aaKnown RBP eCLIP27.65■■■□□ 2.029e-9■■■■■ 35.9
GCSH-208ENST00000639169 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
GCSH-208ENST00000639169 CTTNBP2Q8WZ74 1663 aa27.59■■■□□ 2.01
GCSH-208ENST00000639169 TIAM1Q13009 1591 aa27.58■■■□□ 2.01
GCSH-208ENST00000639169 PCF11O94913 1555 aaKnown RBP27.57■■■□□ 2
GCSH-208ENST00000639169 ITGAEP38570 1179 aa27.55■■■□□ 2
GCSH-208ENST00000639169 FHAD1B1AJZ9 1412 aa27.55■■■□□ 2
GCSH-208ENST00000639169 RRBP1Q9P2E9 1410 aaKnown RBP27.55■■■□□ 2
GCSH-208ENST00000639169 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
GCSH-208ENST00000639169 LRRC9Q6ZRR7 1453 aa27.5■■□□□ 1.99
GCSH-208ENST00000639169 CCNB3Q8WWL7 1395 aa27.5■■□□□ 1.99
GCSH-208ENST00000639169 EFCAB5A4FU69 1503 aa27.49■■□□□ 1.99
GCSH-208ENST00000639169 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
GCSH-208ENST00000639169 PBRM1Q86U86 1689 aa27.46■■□□□ 1.99
GCSH-208ENST00000639169 PHLDB1Q86UU1 1377 aa27.45■■□□□ 1.98
GCSH-208ENST00000639169 ERCC6Q03468 1493 aa27.42■■□□□ 1.98
GCSH-208ENST00000639169 WDR62O43379 1518 aa27.42■■□□□ 1.98
GCSH-208ENST00000639169 CASKIN1Q8WXD9 1431 aa27.42■■□□□ 1.98
GCSH-208ENST00000639169 FYCO1Q9BQS8 1478 aa27.39■■□□□ 1.98
GCSH-208ENST00000639169 CFAP43Q8NDM7 1665 aa27.37■■□□□ 1.97
GCSH-208ENST00000639169 GRIN2BQ13224 1484 aa27.37■■□□□ 1.97
GCSH-208ENST00000639169 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
GCSH-208ENST00000639169 SAMD9Q5K651 1589 aa27.37■■□□□ 1.97
GCSH-208ENST00000639169 SNAPC4Q5SXM2 1469 aa27.35■■□□□ 1.97
GCSH-208ENST00000639169 FMN1Q68DA7 1419 aa27.35■■□□□ 1.97
GCSH-208ENST00000639169 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
GCSH-208ENST00000639169 FAM50AQ14320 339 aaKnown RBP27.33■■□□□ 1.97
GCSH-208ENST00000639169 DHX57Q6P158 1386 aaKnown RBP27.32■■□□□ 1.96
GCSH-208ENST00000639169 LRRIQ1Q96JM4 1722 aa27.25■■□□□ 1.95
GCSH-208ENST00000639169 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
GCSH-208ENST00000639169 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
GCSH-208ENST00000639169 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
GCSH-208ENST00000639169 ARID3CA6NKF2 412 aa27.21■■□□□ 1.95
GCSH-208ENST00000639169 MTUS2Q5JR59 1369 aa27.19■■□□□ 1.94
GCSH-208ENST00000639169 RAB3GAP2Q9H2M9 1393 aa27.18■■□□□ 1.94
GCSH-208ENST00000639169 DIEXFQ68CQ4 756 aaKnown RBP27.16■■□□□ 1.94
GCSH-208ENST00000639169 FBLN2P98095 1184 aa27.14■■□□□ 1.94
GCSH-208ENST00000639169 ZNF316A6NFI3 1004 aaPredicted RBP27.14■■□□□ 1.93
GCSH-208ENST00000639169 GRIN2AQ12879 1464 aa27.1■■□□□ 1.93
GCSH-208ENST00000639169 CHMP7Q8WUX9 453 aaPredicted RBP27.09■■□□□ 1.93
GCSH-208ENST00000639169 MAGI3Q5TCQ9 1506 aa27.08■■□□□ 1.93
GCSH-208ENST00000639169 SETD5Q9C0A6 1442 aa27.07■■□□□ 1.92
GCSH-208ENST00000639169 FGD6Q6ZV73 1430 aa27.06■■□□□ 1.92
GCSH-208ENST00000639169 KIAA0586Q9BVV6 1533 aa27.05■■□□□ 1.92
GCSH-208ENST00000639169 CLSPNQ9HAW4 1339 aa27.05■■□□□ 1.92
GCSH-208ENST00000639169 NCOA2Q15596 1464 aa27.05■■□□□ 1.92
GCSH-208ENST00000639169 UGGT2Q9NYU1 1516 aa27.04■■□□□ 1.92
GCSH-208ENST00000639169 DISP1Q96F81 1524 aa27.02■■□□□ 1.92
GCSH-208ENST00000639169 CDK13Q14004 1512 aaKnown RBP27.01■■□□□ 1.92
GCSH-208ENST00000639169 EPRSP07814 1512 aaKnown RBP26.99■■□□□ 1.91
GCSH-208ENST00000639169 MAGI1Q96QZ7 1491 aaPredicted RBP26.98■■□□□ 1.91
GCSH-208ENST00000639169 PTPRKQ15262 1439 aa26.98■■□□□ 1.91
GCSH-208ENST00000639169 CEP170Q5SW79 1584 aa26.96■■□□□ 1.91
GCSH-208ENST00000639169 SYNJ2O15056 1496 aa26.96■■□□□ 1.91
GCSH-208ENST00000639169 MYOM3Q5VTT5 1437 aa26.95■■□□□ 1.9
GCSH-208ENST00000639169 HECW1Q76N89 1606 aa26.95■■□□□ 1.9
GCSH-208ENST00000639169 KIAA0556O60303 1618 aa26.95■■□□□ 1.9
GCSH-208ENST00000639169 MAPKBP1O60336 1514 aa26.94■■□□□ 1.9
GCSH-208ENST00000639169 EHBP1L1Q8N3D4 1523 aa26.94■■□□□ 1.9
GCSH-208ENST00000639169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.94■■□□□ 1.9
GCSH-208ENST00000639169 CCDC18Q5T9S5 1454 aa26.94■■□□□ 1.9
GCSH-208ENST00000639169 SUPT6HQ7KZ85 1726 aaKnown RBP26.93■■□□□ 1.9
GCSH-208ENST00000639169 SIN3AQ96ST3 1273 aa26.88■■□□□ 1.89
GCSH-208ENST00000639169 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
GCSH-208ENST00000639169 JPH4Q96JJ6 628 aa26.85■■□□□ 1.89
GCSH-208ENST00000639169 NUP153P49790 1475 aaKnown RBP26.84■■□□□ 1.89
GCSH-208ENST00000639169 NEUROD1Q13562 356 aa26.83■■□□□ 1.89
GCSH-208ENST00000639169 CHIC2Q9UKJ5 165 aa26.82■■□□□ 1.88
GCSH-208ENST00000639169 PTPN23Q9H3S7 1636 aa26.81■■□□□ 1.88
GCSH-208ENST00000639169 NUP160Q12769 1436 aa26.8■■□□□ 1.88
GCSH-208ENST00000639169 PLB1Q6P1J6 1458 aa26.79■■□□□ 1.88
GCSH-208ENST00000639169 RRP7BPQ9NSQ0 103 aa26.77■■□□□ 1.88
GCSH-208ENST00000639169 RAPGEF6Q8TEU7 1601 aa26.76■■□□□ 1.87
GCSH-208ENST00000639169 HFM1A2PYH4 1435 aa26.74■■□□□ 1.87
GCSH-208ENST00000639169 NAIPQ13075 1403 aa26.73■■□□□ 1.87
GCSH-208ENST00000639169 MIER1Q8N108 512 aa26.73■■□□□ 1.87
GCSH-208ENST00000639169 ZNF644Q9H582 1327 aaPredicted RBP26.71■■□□□ 1.87
GCSH-208ENST00000639169 PRG4Q92954 1404 aaPredicted RBP26.7■■□□□ 1.86
GCSH-208ENST00000639169 TCOF1Q13428 1488 aaKnown RBP26.69■■□□□ 1.86
GCSH-208ENST00000639169 CARMIL2Q6F5E8 1435 aa26.67■■□□□ 1.86
GCSH-208ENST00000639169 CDK11AQ9UQ88 783 aaPredicted RBP26.63■■□□□ 1.85
GCSH-208ENST00000639169 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
GCSH-208ENST00000639169 UACAQ9BZF9 1416 aa26.59■■□□□ 1.85
GCSH-208ENST00000639169 KDM6BO15054 1643 aa26.57■■□□□ 1.84
GCSH-208ENST00000639169 TROQ12816 1431 aaPredicted RBP26.56■■□□□ 1.84
GCSH-208ENST00000639169 TRIM52Q96A61 297 aa26.53■■□□□ 1.84
GCSH-208ENST00000639169 YTHDC1Q96MU7 727 aaKnown RBP26.53■■□□□ 1.84
GCSH-208ENST00000639169 KIF14Q15058 1648 aa26.53■■□□□ 1.84
GCSH-208ENST00000639169 ZNF777Q9ULD5 760 aaPredicted RBP26.53■■□□□ 1.84
GCSH-208ENST00000639169 CHD1O14646 1710 aa26.52■■□□□ 1.84
GCSH-208ENST00000639169 SCAF1Q9H7N4 1312 aaKnown RBP26.51■■□□□ 1.83
GCSH-208ENST00000639169 ABCC5O15440 1437 aa26.5■■□□□ 1.83
GCSH-208ENST00000639169 CFDP1Q9UEE9 299 aaPredicted RBP26.5■■□□□ 1.83
GCSH-208ENST00000639169 DAPK1P53355 1430 aa26.5■■□□□ 1.83
GCSH-208ENST00000639169 ATP10BO94823 1461 aa26.49■■□□□ 1.83
GCSH-208ENST00000639169 ABCA8O94911 1581 aa26.49■■□□□ 1.83
GCSH-208ENST00000639169 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
GCSH-208ENST00000639169 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
GCSH-208ENST00000639169 GPATCH8Q9UKJ3 1502 aaKnown RBP26.46■■□□□ 1.83
GCSH-208ENST00000639169 PTPRGP23470 1445 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms