RNA–Protein interactions for RNA: ENST00000639109.1

PAX6-253, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-253ENST00000639109 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
PAX6-253ENST00000639109 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
PAX6-253ENST00000639109 APLP2Q06481 763 aa16.38■□□□□ 0.21
PAX6-253ENST00000639109 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
PAX6-253ENST00000639109 ABCA5Q8WWZ7 1642 aa16.38■□□□□ 0.21
PAX6-253ENST00000639109 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
PAX6-253ENST00000639109 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
PAX6-253ENST00000639109 CENPBP07199 599 aaPredicted RBP16.34■□□□□ 0.21
PAX6-253ENST00000639109 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
PAX6-253ENST00000639109 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
PAX6-253ENST00000639109 FHOD3Q2V2M9 1422 aa16.31■□□□□ 0.2
PAX6-253ENST00000639109 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
PAX6-253ENST00000639109 CUL7Q14999 1698 aa16.29■□□□□ 0.2
PAX6-253ENST00000639109 WDR62O43379 1518 aa16.29■□□□□ 0.2
PAX6-253ENST00000639109 RRBP1Q9P2E9 1410 aaKnown RBP16.24■□□□□ 0.19
PAX6-253ENST00000639109 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
PAX6-253ENST00000639109 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
PAX6-253ENST00000639109 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
PAX6-253ENST00000639109 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.18
PAX6-253ENST00000639109 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
PAX6-253ENST00000639109 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
PAX6-253ENST00000639109 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
PAX6-253ENST00000639109 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
PAX6-253ENST00000639109 GTF3C3Q9Y5Q9 886 aa16.18■□□□□ 0.18
PAX6-253ENST00000639109 FBLN2P98095 1184 aa16.17■□□□□ 0.18
PAX6-253ENST00000639109 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
PAX6-253ENST00000639109 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
PAX6-253ENST00000639109 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
PAX6-253ENST00000639109 PRKCSHP14314 528 aaPredicted RBP16.17■□□□□ 0.18
PAX6-253ENST00000639109 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
PAX6-253ENST00000639109 ITGAEP38570 1179 aa16.15■□□□□ 0.18
PAX6-253ENST00000639109 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
PAX6-253ENST00000639109 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
PAX6-253ENST00000639109 MIER1Q8N108 512 aa16.1■□□□□ 0.17
PAX6-253ENST00000639109 EFCAB5A4FU69 1503 aa16.08■□□□□ 0.16
PAX6-253ENST00000639109 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.16
PAX6-253ENST00000639109 LRRC9Q6ZRR7 1453 aa16.07■□□□□ 0.16
PAX6-253ENST00000639109 SAMD9Q5K651 1589 aa16.07■□□□□ 0.16
PAX6-253ENST00000639109 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
PAX6-253ENST00000639109 PHLDB1Q86UU1 1377 aa16.07■□□□□ 0.16
PAX6-253ENST00000639109 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
PAX6-253ENST00000639109 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
PAX6-253ENST00000639109 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
PAX6-253ENST00000639109 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.16
PAX6-253ENST00000639109 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
PAX6-253ENST00000639109 FYCO1Q9BQS8 1478 aa16.02■□□□□ 0.15
PAX6-253ENST00000639109 CFAP43Q8NDM7 1665 aa16.01■□□□□ 0.15
PAX6-253ENST00000639109 FAM50AQ14320 339 aaKnown RBP16■□□□□ 0.15
PAX6-253ENST00000639109 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
PAX6-253ENST00000639109 SYNJ2O15056 1496 aa15.96■□□□□ 0.15
PAX6-253ENST00000639109 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.15
PAX6-253ENST00000639109 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.14
PAX6-253ENST00000639109 DISP1Q96F81 1524 aa15.95■□□□□ 0.14
PAX6-253ENST00000639109 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
PAX6-253ENST00000639109 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
PAX6-253ENST00000639109 MAGI3Q5TCQ9 1506 aa15.93■□□□□ 0.14
PAX6-253ENST00000639109 CDK13Q14004 1512 aaKnown RBP15.93■□□□□ 0.14
PAX6-253ENST00000639109 YTHDC1Q96MU7 727 aaKnown RBP15.93■□□□□ 0.14
PAX6-253ENST00000639109 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
PAX6-253ENST00000639109 RAB3GAP2Q9H2M9 1393 aa15.91■□□□□ 0.14
PAX6-253ENST00000639109 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
PAX6-253ENST00000639109 SETD5Q9C0A6 1442 aa15.9■□□□□ 0.14
PAX6-253ENST00000639109 KIAA0556O60303 1618 aa15.89■□□□□ 0.13
PAX6-253ENST00000639109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.88■□□□□ 0.13
PAX6-253ENST00000639109 EPRSP07814 1512 aaKnown RBP15.86■□□□□ 0.13
PAX6-253ENST00000639109 NUP160Q12769 1436 aa15.86■□□□□ 0.13
PAX6-253ENST00000639109 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
PAX6-253ENST00000639109 PLB1Q6P1J6 1458 aa15.85■□□□□ 0.13
PAX6-253ENST00000639109 FGD6Q6ZV73 1430 aa15.82■□□□□ 0.12
PAX6-253ENST00000639109 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
PAX6-253ENST00000639109 HECW1Q76N89 1606 aa15.81■□□□□ 0.12
PAX6-253ENST00000639109 TIMELESSQ9UNS1 1208 aa15.81■□□□□ 0.12
PAX6-253ENST00000639109 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
PAX6-253ENST00000639109 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
PAX6-253ENST00000639109 CHD1O14646 1710 aa15.78■□□□□ 0.12
PAX6-253ENST00000639109 EHBP1L1Q8N3D4 1523 aa15.76■□□□□ 0.11
PAX6-253ENST00000639109 CHIC2Q9UKJ5 165 aa15.76■□□□□ 0.11
PAX6-253ENST00000639109 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
PAX6-253ENST00000639109 CCDC18Q5T9S5 1454 aa15.76■□□□□ 0.11
PAX6-253ENST00000639109 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
PAX6-253ENST00000639109 RAPGEF6Q8TEU7 1601 aa15.75■□□□□ 0.11
PAX6-253ENST00000639109 SUPT6HQ7KZ85 1726 aaKnown RBP15.75■□□□□ 0.11
PAX6-253ENST00000639109 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
PAX6-253ENST00000639109 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
PAX6-253ENST00000639109 ERCC6L2Q5T890 1561 aa15.72■□□□□ 0.11
PAX6-253ENST00000639109 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
PAX6-253ENST00000639109 RRP7BPQ9NSQ0 103 aa15.7■□□□□ 0.1
PAX6-253ENST00000639109 PTPN23Q9H3S7 1636 aa15.69■□□□□ 0.1
PAX6-253ENST00000639109 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
PAX6-253ENST00000639109 ERICH6Q7L0X2 663 aa15.67■□□□□ 0.1
PAX6-253ENST00000639109 HFM1A2PYH4 1435 aa15.65■□□□□ 0.1
PAX6-253ENST00000639109 PTPRGP23470 1445 aa15.65■□□□□ 0.1
PAX6-253ENST00000639109 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
PAX6-253ENST00000639109 KIF14Q15058 1648 aa15.64■□□□□ 0.09
PAX6-253ENST00000639109 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
PAX6-253ENST00000639109 ATP10BO94823 1461 aa15.64■□□□□ 0.09
PAX6-253ENST00000639109 BCL11AQ9H165 835 aa15.63■□□□□ 0.09
PAX6-253ENST00000639109 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
PAX6-253ENST00000639109 ABCA8O94911 1581 aa15.62■□□□□ 0.09
PAX6-253ENST00000639109 CDK11AQ9UQ88 783 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms